| Morex x Barke POPSEQ 2013 | Oregon Wolfe POPSEQ 2013 | Morex Genome Release 2012 |
|---|
| No map location | No map location |  |
Predicted Genes from contig_48980
| Gene ID | # CDS Predicted | Max CDS Length | Probes in Cluster | FPKM by Treatment | FPKM by Replicate | Top Rice Hit |
|---|
| MLOC_64544 |
1 |
786 bp |
MLOC_64544.1 |
Available |
Available |
LOC_Os05g47700.1, FRAME:+1, EVALUE:2e-37, 13105.m05055 protein LTPL152 - Protease inhibitor/seed storage/LTP family protein precursor, expressed |
CDS Structure of MLOC_64544
Contig Sequence (8565 bp)
>contig_48980 8565 assembly3_WGSMorex_rbca.fasta
GGGGGGGGGGGGGTCTATTTACCGAGGAAGCATAAATTTGGCTCCTACTATGAAAAAGTA
CTAGTCTCGGTGCTACCGGACATTGAACTATCAGAAGGGAAATACACATTCCTGGAAAGG
CAAACACTTGGAGGGTACCAAGATGCCCATTAAGTCTCTAAGAATTCAAATACCAAGGTA
TATCGGAAAGAAAACAGCTCCGATGTGCTAGACAAACTAGGTAGCTCATTTTCGCGAAAT
ACAAGAAGCACTGGAGAAAATGTTCGGAGGTGTGTGATCGAAAAAAAGATGGTTTCATAG
GAAGGCAACTCGGTGATACCAGAGAAAAATTCCCGGCAGTTCTGAAGTGAACAAAGAACA
GACTGCGCATAGATAGAAACACACATTCCTCACAGGATTAGTAGTATCAGGTAGAGATTC
TCAAAATTGGCAAAAACAAAGGACTTTGAGTGGAGATAGTTGAAAACTTGGTAATTTTGG
TTGAGGATCTTAATTTAGAGTTCACCCAAGATATTATTCTTGTTCCCCTCTTTGCAGTAT
GGTTTTCCTTAAACTCATGGTTAATTTTGGATTCACCTGAAGCATACAAAGATGCAAGCT
ATGAGGTCAAGGACCCTCTTAATTACCTGCAAAAGAGGGCCCTCTTAACTTCATTACCAT
TAATGGCCACAACCCAATGGAGGTATACGATTCACTCTGAATCTCCCCTTTTTGGTGGTT
GATCACAACACAATTAGGGCATGTTTGGGACTGCTCTACTCCACAAAAATCAGCTCCGCT
CTAGAAAACATAAGCCAAACGGGGTAGCTTCACGATGTACAACTTCACAAAAAAAACTAG
AATCTGGGGTCCAACTTCTTGTTTTTTATGAAGCTAGCTCTCTAGGAGGTGCTCCATAAA
ATTGTAGAAGCTGGAGTTGGACCAAAATTACCCACCACTGCCATCAGTAAGTGGATACCC
CTTCGTTTCTCCCCTCTCATCCAATCAAATAGATCCTTTTCATCAAAATTTTCATTCGTG
AAGTTGGAGCTGGATAAAAGCCAAACATTCTCTTTAAAAAGACCTACAACTCCTATATAA
AACTGCTCCAAAATGAATTTGGTGGAACGGAGCTATTTTTGATGGAGCGGAGCGGTCCCA
AACAAGGCCTTAGATTAGCAATGTGAAAGTTCAGGTGCTTATTATATGTTTTGAGCTCCC
CTATTTGTTGGCACTACTATTTTTTTGGGGGGAATGCAAGTGTTACATATTACTCTTTTC
ATAATATGTGCATAGATTTTTTGTAAGGTCAAACTTTGTAAACTTTGATCAAGTTTATAA
AAAAAACTATTTATATCTACAATACTAAATGTATAAAATGTGAAACTACATCTTATGATA
AATCTAATAGTAATCCCTCCGTGTCGAATTACTAGTTGCAAAAATGAATGTATCTAGACT
TATTTTTAGTTCTAGCTAGATACATCTATTCCTATCCATTTACGCGACAAGTAATTTGAG
ACGGATGGAGTATATGCTTAGCTTTCTAGATATAAATGTTTTTCTTCATAAACTTGATCA
AAATTTAAGAGGCTTGACTTTTGAGAAAAAAAATAAAAATGCACTATATTATAAAACACA
TGGAAAGTGTGTGAACAACACACATATGACGCATTCCTTGGGGTGCAGCGGTACGTCTAT
GGCGGTTGATTCTGGATTTTGTTAGCAAATAACAATCCCATTTTATAAGAAGCGGTAATG
TTCATAGCAATAGTTACAATATCATGCGGCATCATTAGCCACACCACACATGTCGGCCTA
AATCAAGGGACAAAGCATGTTTTGCCAAATTATGGGCGTCATACTTATTGTTCCGGCCTT
CATGGACATAACTGCATTCATCAAACTTCAAAGCTTTGGCTGGCATTGATCTTTCAGTTG
AGGCGATTCTGGAGGGCCCATCTGAGATTGGGAATGTATTTCTTCCGGCCCGCTAGAGAT
GTGCCGCCGGTGATCATGACCCGTTCTGTTTAAGCGAGGGTTCTTTTGGACGAGAGAATA
GGCTTTGGGTTTTGTGTCATAGCTTGTTTCAGTTATTGTCATTGTAACACTCTAGAATGA
GGCAAAGGTTTTGCCTCCACTTTGAAAAAACAGCTTTGCTAAAAGTCAGTTGACTGAGAC
TTCGATACTATAGTCCGTTGATTTTGCATTAAGATTCATGCAAATAATTTTTTCTCAGTT
TTTTTCTTTTTGCATACTATATTACTTGACTTAGACTTCACAACCTAGACACTCCCTTGA
AAAAATTCCACCTGTCAAAACATTACCTGACCTTAGCGTGTCTCTAAATGTGATGCGTGG
GTAGTTAAATAATAGGAACCGACGAAGTGCCATTGCCACTAATCCAAAGGTCGTTGGCTT
AATGAAATCGAGCAATTGATCTGTTTATCCCTTTATACTTTCTCTCTATAACATGTGAAC
ACGTCTATTTTTTGGCGAGCAAGGACGCAGTAGGCATGAACCCGTCGGTGAGTACAGTCG
TTTCTGATATGATCAGAACGTGGGACACGCAGCCGAGCTCAACAAACGTTATCATGGGCA
TGCCGTCCACCCAGCCTGCTTTTTCTATGGGTTGTGACTTGTGACACTTGCAGTTTCAGA
GCTAATGCATGTGGCTTTGTTGTGCTAGTACTTGAGTTGCTTTCGGCGTGACCATTATGT
CAGTTCACCATTAATTTGTAGTAGTGCGTGGACCCATTAATTTCCGTTCCATCATCATCA
TGTTTTCCATAAACGCACACTTGTACTGCACTACCCAATGCCATTTGGCCCGTAGGTGCC
TGGACTCTCTTGACCGAACGTCCATAAATAACACCAATCTCACCCCCTAACACCCACACC
ATCCAAAACCATCTTTGCACAAGCCACTAGCTCACTAGTCACTACTCACTACTACCAGCC
GATCTACATTTCTTCGTCAGAGTTCCAGAGACGCCATGAAGTACTTGGGGCAGCTGGTGG
TGGCACTCCTGGCCTTCTCGGCGGTGGTGCTGATGATGGCGCCGGCCGGAGCCGAGGCAG
CGACCTGCAACGCGCTGCAGCTCACCCCGTGCGCGGGGGCTATCATCGGGAACGCGGCGC
CCACGGCGTCGTGCTGCAGCAAGATGAGGGAGCAGAGGCCGTGCATGTGCCAGTACGCGC
GCGACCCCAACCTGAAGCAGTACGTCAACTCCCCCAACGGCAAGAAGGTCCTGGCCGCCT
GCAAGGTGCCCGTGCCATCCTGTTAAATCGACGCATATGGTCAGAGATGAGAGAGCAGAG
CTGGTGGCCTCCCTCTCTGGACGCTGCATGTGTTGATGTGTGAGTGTGTTCGGTTGCCGT
GTGTGTAGCTACCCCGACGTATCTGTATCTGAAATTCTGAATAAATGCAGTAATAATGAT
GTGTGTTGTTTGTTTAAGGTGTCATCGTGTTTTTTTTTTTTTTTTGGTTCCTCTCGGATG
GTGCTAATGTGAGAAGATGAGGAACCACGATTTCTGAAAGCCTCGGGCTAAACCTAAGCA
TTTATAAAAACGCCAAATACCACTAATGGAAAACGGGGCTTTAGTCCCGGTTCGTAAGGA
CCTTTAGTCCCGGTTATTCAATCGACGCTACTACATATAGCAATGAAGGAAAGAAGTGAC
TTCTTTCTTCATGTTTGGTCGAACATTAGTATAAATTATGGAAGAACAATATCCAACATC
AGTACAAATTAGATCGATGCAAGAGGCCAGGTTAAATTAGAGGAAAATACGATGTTGCGA
TTCACAACATCGTATTTTCCTCTAATTCAACCTGGCCTCTTGCATCCATCTAATTTGTAA
ACATCGTATTTTCCTTTAATTTAACCTGGCCTCTTGCATCCATCTAATTTTATTAGTATA
CATCATATAAAAACTCATCATCATGTTATGAACTCCTCGTCATTCTAGTTGTTATCACAC
TAGATAGTTAAACAACTCTTCATCATTGTAGATAAAATAACATAAAAAAATGAACTCCTC
ATCATTCTAGTTATTATTATACTAGCAAGTACCAAGTTATCACAAGTTAGAAACACTAAC
TATTGTTCTCTCCTAGGTAAAATAGCATAAAAAAGGGGAACTCCTTCATCTTCACATTGA
AGAATACAAATCAACCTATCTCCAACTTGTAGCATGCACAAGTTATCGTCTCCAAGTGGT
TGCGTGGATGCTTTTACCGCATTGCTTCATCCTTTGATTTTCAAGGTATCTTCACTTCGA
GATATTCTATATTTACCAGGGTAACCCATCCAAATTGGGCGTAAGCTAACCATATGCAAA
TCACCATTGGTAAACATCGATTTTGGCACGGTCTCTGGCGCAGTACCTGTTAGAGAACAT
AAGTAATAATAACATAGTTAGCAAATAAGGTTTGCTTAAGAACAATATATGAAAAAGATG
GACTAGTGACGCAATGGTAAAAAAATTCTTAGAAAGTTGTCTGAAGTGATGTTATAAGGG
TTCAAGTGGAGCACTAGTGGCACATATCCATGATAAATGCTGCCAGACGTGTAATATTTA
GCATGATTCTGAACATCATGAATAAATGATATCAAATNNNTTTTCTCCAACCAAATAAGC
TCGGAGCCATAACTGTAGTAGGTCCGATCTATTATCTACTGAGTAGTTCTTGTAGCAGAG
AAATAAGCTGATAATTTAAAATAAAAAAGTTTAGTCGGGATGAGTACCAAATGCTTTCCA
ATAATAAATATAAATTGCCTAACAAATCTATTGACAAACTCACCTGAGGTAGAACTGAAA
ACAAATCATCCGCATGCACCTAAATTTCTATATTATTATCACAAACATCATCATTATCAA
GATCTAAGGTAATGTTCATGTCCTCATCCAACCCATAAGCCTTGCAAAATGATCTCCAAT
TAAAACAACCAAAATATTCTGATCTTCTTCATTTTTTACCTTAACAACAAAACTGCAATG
CTTTGTTCTTAGGTCAGCTATCTTAGGTTGGGTGCTATCCTTCTCTCTGAAATGGAACTT
GTCCGAGACAGCGAATCTTGCATGGTAGGAAATGCAATAGTTGAATTATACAAAAGAAAA
TTAAAAGTTAATTAAAGCAAAAAACACACCTCATACTTCATTAACAAAGAATACATGTCG
TCTTATACAATTTTAATATAAAAGTCATCTTTTACCTTGATGGTGAAGGACATATCGTTG
TCTAGGTGAGGATAACAGTCGCATATACCCCTACCATCCCAGCACAAATGGCACTCAGGG
ATCGTCCCCTCATCGTGAGACGATGAGATTTCCGTGTACATGATTCTAAGATTAAAAATC
GACGGCAATTATACAAGGAACTATTCAGCATGGGACTCCTCACCGGCGATCCTCGGGGAC
TCCTCACCGGCGATCCTCGGGGATTCCTTTGGCGATCCTCGGGGACTCTTCAATCGGCGA
CCGTCGGGGATTCCTTCGGCGATCGTCGTGGACTCCTCACCAGCAATCGTCGGGGACTCC
TACGACGATCGTCGAGGACTCTCACCATCGATCGTCCGGACTCTTCCGGCGATCATCGAG
ACTCCTCACCGGCTATCGTCGAGCACTCCTCCGCCGATCGTCGGGGACTCCTCCGACGAT
ATGAAATGTAATTTTAGACGATAAATATTTATGATTTATATATATCTCATAAATACAAAC
ATATACATAGTATTTGTATACCAGAAATAATTTTAGCATTGAAAACTTTCTAAAAACTTG
GAATATATTGGGTTGTCGACTTTTATAGTAAATGAAGATGATGGCAAACACTATTTTAAT
AGGTAAGATGGTTGGCTCATAAACTTCTATATTAGCATATATAGGAGCAAATCAAAATTT
CACGATATATGTTGGCTTATTAAAGAACATACAAATTAGGATACATACAAGGTTTTATTA
TATTTTTTTGATGTCGAAACAAAAAAGAATTCAAAAATGAGAGAGGGAGAGAGAGAGAGA
CGCATTTCCGAGCATTCGAGCTCCTCTCTCCCACTACCTCGCACGGCTCTTCGCAGCCGC
CACGTACGGCGGCCGATTTTGGAGGCCACCGACGGGGCCGAAATCCAACAACACTTCCTC
GTTTCGCTCCTCCCTCTTCTCCATCCGCCACGCATGCCCGCCTCCCGTGGCTAGGGTTTC
GGGCTTTCGGCCAACGCTTCGCCGCGTGGCTGCGGTGACTCAGTTTGGTCCCTCACTCCT
CGTCGTCACCCCCGCTCATCTCTTCCTCACATCGTCTCCCCTCCCTTCCCAGAACCAACA
CGAATCGTTGCTCGAGCACCAAGACGCCATGGACGGGAAGGCTGCTTCCTCCCATGCCCC
GACACCATAGAGCAGTAGTAGCAACAATAGCGAATTCGGTGGTCGGCGAGGAGGCGGACG
AGGGCCTCACAATGACTTTCCATTAGGGCAGGTCCTCTAGGACTTTCCAATAGGGCAGGC
CCCAAAATATAAATTTCTTCTTCCACATGTGCGCATGTCCGGTAGCGTCGTCATTCGGAA
TAGATTGACCTCCAGGACCATTTCCAAAGATTACTTTTAAATCCTTGACCATATCAAATA
TGTCATCAGCATTACAGTGGTGAGGCTTCTTCTAGTATTCCGCCTCACCTTTGAAATGCT
TGCCTTTCTTTCATACGAGATGCTTGATCGGAAGAAATTGATGATGCCCGAGATACACAA
CTTTCTTAAATTTATCCAAATATGCATCTTCGGTCTCATCTAAACAGTGCGTGCATGACA
TGTATCCCTTGTTTGTCTGTCTTAAAAGGTTACTAAGAGCAGGTCAATCATTGATGGTTA
CGAAAAGCAATGCTCGTAGGTCAAATTCCTTTTATTTATGCTCATCCCACACACGTACAC
CTTTTTTATTCCATAACTGTAAAAGTTCTTCAACTAATGGCGTTAGGTACACATCAATGT
TGTTGTCGGGTTGCTTAGGGCCTAGGATGGGCACTGACATCATAATGATATTCTGTTTCA
TGCACAACCAAGGAAGAAGGTTATAGATACATAGAGTCACACGCCAGGTGCGATGGTTGC
AGCTCTGCTCCCCAAAAGGATTCATGCCATCTGTACTTAGAGCAAACCATAAGTTACTTG
CGTCAACTGCAAAATCCAGGAACTCCCTCTCGATTTTCTCCACTTTGACCCATCAAGGGT
ACTCTCAACATCACGTCTTTCTTACGGTCTCCTTTTTGCCATCACAACAACTTGGCATGC
TCTTTATTTTGGAACAAAAGTTTTAACCGTGGTATTATAGCAGCATACCACATCACCTTG
GCCGGAACCCTCTTCCTGGGGCACTCGCCCTCAACATCACCAGGGTCATCGCGACTGATC
TTATAGCGCAATTTATCGCATACCGAGCATGCATTCAAATTCTCATACTCCTCACCGCGG
AAGAGGATGCAGTCATTTATGCATGCAAGTATCTTCTACACCTCTAATCCTAGAGGACAG
AGAACCTTCTTTGCTTCGTACGTATTGTCAGGCAAGTCGTTATCCTTTGAAAGCTTCTCA
TTCATTATTTTCATTAACTTCTCAAATCCCTTGTCAGATAAACCATTCTATGCCTTCCAT
TGCAGCCATTCCAGTGTGGTACCGAGCTTTGTGTTTTATCCTTGCAATTTGGGTACAACA
TTTTTTTATGATCCTCTAACATGCGCTCCAACTTAAACTTCTCATTTTCACTTTCGCATT
TTCTCTGTGCATCAACAATGGCCCGACAAAGATCATCAGCGGACACATTTGGGGCCTCTT
GATCTTCAGCTCCCCCGTTGCAGTATCACCGTATTCACGGAACATAAGGTAGTTGTCATC
CTCCTCTTCTTCTTCATTGTCTTTCGTCATAACCCATCTTTCTCCGTGCTTGGTCCAACA
ATTATAGCTTGGCATGAAACCGGACCGGAGCAGGTGGGTGTGAAAGATTTTCGAGGAAGA
GTAATCCTTCTTATTCTCATAATCAACGCATGGGCAACGCATATAACCATTCAGACTGTT
TGCCTGAGCCACAACGATAATATTATGCAGGGCCGAAATGTACTCGGCAGTGCATCGGTC
ATCGTACATCCATTGCCGGTTCATCTGCATTGTATAATTAAGTATATCAAAAACCATTAC
AGAACATCATGAATAGAGAAATGACCAAATTAATACAAGTTCATCAGATTAAAATCAAAG
TACAGTAGTGATCAAATGTTATTACTGTAAATATAAATACATAAAATTCCTATATAGTTT
GTCAAACTAACATACATTGAAACTAACATACAACTATGTAAAACATAAAAATGTAACAAC
AAATGCGATCAAAATCGCAACTAGGGTAATAATTGATCCAACATCATAATGATACCAAGC
CTCTTTAAGCGCATTGCATCCATCTGGATCTTGTGTAGATCGACGACATCGACAACATGC
AACTCCAATTACAACTTCTCTTCTTCAATATTCTTTTCAATATTTCTTTCAAAAAATTGT
TCTCTTTTTCAACTACCTTTAACCTCTCGACAAGAGTGTCGGTTG
