Contig Data
morexGenes
Links



Map Locations of contig_48955 (5036 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map locationNo map location




Predicted Genes from contig_48955

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_64527 4 2127 bp MLOC_64527.1 Available Available LOC_Os11g09020.1, FRAME:+2, EVALUE:0.0, 13111.m00950 protein amino acid transporter, putative, expressed





CDS Structure of MLOC_64527






Contig Sequence (5036 bp)

>contig_48955 5036 assembly3_WGSMorex_rbca.fasta
CTAGGGCATATTTCCAACACCAATAAGGGCAAATTGATCCGTATAATTCCAAAACACGGG
AATAGGGAAACATATAATTTGAGATGGAACGCTATATTTTGTCCGTCATGAAATGCAAAC
AGAATAATTTGTAATAACACAAAGTTTTGTTTGATTTGAGAGGAAGTGAAAACTCAAGAA
ACATAACACTCAAGATGACATAATAGGAATGCTATGTTGCCATGTAGGGAGGGTTCAAAA
TATGTGATGATTGCCTCTAACTACGCCAACTTCACCAACTTGCGATCCTCCTTCCATTGA
AGCATACAGCAGGTGTCGATTTTTTGTCGATAAGTATATAATCTATAAGGATTTATATCC
CTCTTATGAGAAGCAACATCACTTCTACAAAGTCCGAGTGATCAACAATGGCAGTTGCAC
CAAGTATAGAGCTCTCAAACTATGTGAGAGACCTCTTAGCAAACATATAGTAACACATTG
AGGGGGTATAAGTAAGACACCACCATCACCATCAGTTTGCATGACATGGCTCTAATCCCA
TGATGGTGATTTTTTTTCTTTCTTCATCATGGTTACAAAAAGAAAACACTGTTGGTTGCG
CATCCAAAATCTTCAAATGAAATATCCCTTGGTCTTCATATGAAGTATCCATAGTCCATA
TGATACACGAGTGAATATAACAAAAGAAAACCCCTACCTTACAAAGGAATTTGTTACCAT
AATTCTATTTTGGATTGGTACATTGAACTGCATTAGCATCTCATACATCGGTTTGATGAA
CAAATGGATGGTATGGTGTAAGTTTCACCAAAGAGAGTCATCTTCGTCCACTAATTAAGT
ATTGGTTGGACAAGTACACATTGTTGATTCCATGCCATTTTGTAGTGACATTTTAAGTTA
AATGGTCTTTTCGCCAACAAACTGAATATTGGTTAAATGGACTCATAGTGGATTCCATGC
CATTCTGTAATGAAGTTTTAGTTCCATAATCATTTTCGTCTGGATATTAGTAAGATGAGC
ACACACATGAATCCATACCATTTTTGTAGCGACATTTTAGCTATGGTGTCTCTTGTGCCC
AATTCTTAAGTATTGGTTAAGTGAGCTCCCACTGAATTCCATGCCATTCTATAGTGAATT
TTTAGTTCCATAGTTATTTTCGTCTGAATAATGGTTAGATGAGCACACAGGTGATTCCAT
ACCATTTTTGTAGTGGCATTTTAGCTACGGTGTCACTTGTGCCCAACTCTTAAAAGACCT
ACTAAAGGTAGTGTTATTCAAGTTAATTACAAATTTTGAGGCCTAGATATACATTTTGGA
CCATAGGTATTCTTCAGCATAAATCCAAAATTTAATGAACTCAAAAGAAAATCCAAAAAT
CAAGGCCGAGTATATGTTTCTAGTGAAGGGATGACCCTACTTGCATTGACCGATGACATG
TCAATGAGATAAAGCCGACAAGTGGGTCAATAGTTATCCATACTCTAAATGCTCGCCAAT
TCTTTGTGTATTGTGTTGACAACTAGGAGTGCTTATGAGTAAATTGTTGCCATAGTATTG
ATTCCGTACGCGACAGCGGTTCAGTCATTATTCTTCATAAATCACCACCCGCGTCTTTCC
AAAAAAAACAAAAATAAGAAGACTGCCAGCACGCAAACCTGTAGGAAAATCTTGAACCCT
GCGGCTTAAATACACGCCATTCCGTATCGATCCTCCTCCACTTTCCAATCTCCCATCCCC
TCACAAAGTCCGCAAAATCTCCCTCCATGTCCCACGCCATGGCACCCGTGGACATGCGGC
GGTTGGAGACGGGCGCGGGCGGCGGCTACGACGGCATGGGGTTGTCCAAGCGGGTGGACG
ACGACCTCGACGACGACGGCCGGCCGCGGCGCACGGGCACGGCGTGGACGGCCAGCGCGC
ACATCATCACCACGGTGCTGGGGTCCGGCGTGCTGTCCCTGGCGTGGGGGGTGGCGCAGC
TGGGCTGGGTGGCCGGCCCCGGCGTCATGACGCTGTTCGCCGCCGTCATCTACTACACCT
CGGCGCTCCTGGCCGACTGCTACCGCGCCGGCGACCCCGTCACCGGCCCGCGCAACCGCA
CCTACATGGCCGCCGTCCGCGCCACCCTGGGCGGGTCCAAGGTTAAGCTCTGCGGCGCCA
TCCAGTTCGTCAACCTCTTCGGCATCGGCATCGGCATCACCATCGCCGCGTCCGTCAGTA
TGCTGTACGGAACTAACTACTAGACTAAATCGCACTCCACCACGACCTCTTACCTTTTTT
CATCCTGTCATTCCTCATGCCTTTCTTTTTGCTGGATTTCGTACGTGTTGCTGACGAACA
GCGCGATCAAGAAGGCGGGATGCTTCCACAAGGAAGGGCACAAGGGCGATTGCAACGGTT
CCTCCATGAGCCCGTACATTGCCATCTACGGCATCATGGAGATCTTCTTTTCGCAGATCC
CGGGCTTGGATAGCATGTGGTGGCTGTCCACCCTCGCCACCGTCATGTCCTTCACCTACT
CCACCATCGGCATCTCCCTCGGCGTCGCGCAGATTGTAGGTACGTCGCGGTCTCAGGCGT
GGGGTACTGTATATCCCAAGTCTTAGTTAGACGCGTCGACATGTTGAATCGAGGGAATCT
GTTGACGACATTGCAACAAAATTTCAGCCAACGGTGGAATCCAGGGCGGCATCACGGGCG
TGGCCGTCGGCATCAACGCCGCCGGCCAAAGTATCACCATGATGCAGAAAGTCTGGCATA
GTCTTCAGGCGTTTGGGAACATGGCTTTCGCCTACGGCTTCTCTATCGTCCTGCTCGAGA
TCCAAGCAAGTCGCTATCCAGATACTCCTTAATTAATGACCCGTCCTGTCTTTGTTAATT
TGCTGATTGTCGTGCGTGCTGTACTCAGGTGGGGTTGTGTTTGCTGATTTGTTCATTATG
TACATAACTGCTGCCGCAGGACACGCTGAAGGCGGCGGCGCCGTCGGAGGCTAAGGTGAT
GAAGAAGGCGACGGCGGTGAGCGTGGCGGTGACGACGGTGATCTACCTGCTGTGCGGGTG
CGTGGGGTACGCGGCGTTCGGCGACGGGGCGCCGGACAACCTCCTCACCGGCTTCGGCTT
CTACGAGCCCTTCTGGCTGCTGGACGTGGCCAACGCCGCGGTCACCGTCCACCTGGTGGG
CACGTACCAGGTCATCACCCAGCCCATCTTCGCCTACGTCGAGCTGCGGGCCGCCGCGGC
ATGGCCGGACAGCGCGTTCGTCGGCACGAGGGAGGTCCGGCTGTGGCCCTCGGCCGTCCG
CGTGTCCGTGTGCCCGCTCCGGCTGACCTGGCGCACGGCGTACGTGTGCGTGACGACCGC
CGTGGCCATGGCGATGCCATTCTTCGGGTCCGTGGTGGGGCTCATCGGCTCCATCTCCTT
CTGGCCGCTCACCGTCTACTTCCCCGTGGAGATGTACATCGCGCAGCGCCGGGTGCCGCG
GGGCAGCACGCGGTGGCTCTTCCTCCAGGCGCTCAGCGCCGTCTGCCTCCTCGTGTCCCT
CGTGGCGGCCGCCGGCTCCGTCGCCGACGTCGCGGCCGAGTTCAAGGCCCACAACCCATT
TCGCCGGGCGTGACCAGGCCTCGTCGGCGATGCTCCGACGTTTTTACTGCTTCCATGTAC
TCCTACTGGCACTACTAGTTATTATCGTGTACTGTGTGTCGTCAGAAGCTTTCGTCCGGT
GGTCAGCTGCTGAACCGGACGGTAGCACGGGGGCGGCGGGCGGCCCGTGGAATAGTCGTG
GCCTAGTCTACTGGCATAGTGGTTGTGGTTGTGGTTGTGGGTGACACCCGCTTGGCATGT
GTAAACGTGTCTTTTCTTTGGAGTGTCCTTGTGTCTAGACGTGTTGTGCTGGGTTTGTCG
TGTGAGTGTTTTTCTAGAGACCGGGGAATTAAGTCAATGGAGTGGCGAATTATACAAGGC
CACCGACTGCATGGGCAGTCTTTTCTCGTCAAACACACTCGAGTCCATTGAAAATGAAAA
GCATGGCCTGGTCGTTTCGGTTCGTGCTCGGCTCGTGTATGTGGGGCCTCCTCTAGCGTT
TCGTTTGTTGTCTGCGTGTTTCGGGCTATGGCGCCATCCCTAGCATCACCCGCGGCCGCG
TCATCGAATGCTGTCCGCTGAGCGCATCTCCAGCCACAGGCCCCTCCGGGTTTTTTAGAC
ATCAACGTTAATAAATTCTTACAATTGCGTTTTTACGACATTGTTTTTGTCGGTTGGGTT
CATTTTTGTATCAGCAATCAGAGGCCGAATTCAACGCGCTCGGGCAGTTGGGTGGTCCGG
ACAAAGAAAAGTGGTGTGTGGGATGTTACTATGAGGCGAGAAACACACCCCCACCCCCGC
CAGATTCGCCCTTGCACGCCAGAGGAAGCCTCGCCGACATGCCGATTCGGGCGTCGCCCA
CCTGCCCACAACTGTTGTCCCACCGGTAGAAAAGGTCATTTCTCGTCGGTTTCGCGACAA
CCTCCATCCCGCTCTCGTGGACGAGCTTTTCAGACCGCTCACCGGCAACTGCCCACCCAC
CACGCCCGCCATGTGTTCGGCGATTTGCATGCTCGGCCATGGACTTAGACGACGAGGACG
CGTTCGCGGATCTGATGGAGGAGGAAGCCGAGGACGACATCGCCGATGAAGAGCACCTCA
TGATCCTCGCCGCGTTCGCGGCTCTGATGGAGGAGGAAGCCGAGGACGACACCATCGACA
AAGAGCACTTCATGATCCTCGCCGCGTTCACGGCTCTGATGGAGGAGGAAACCAAGGACG
ACACCGCTGACGAAGAGCACCTCACGATCCTCGCCGCGTTGGTCGGCCTGTTCGCGAATG
ATGCCAAGCCACAGCGAGGTGGCTAGGCGTCGGGTCGTCGCAAGAGCAAACAAAGACATC
GCATGGAGGGCTATTGCATGCTCTACGCCGACTACTTTGCCGATGCTCCTCTGCACGGCG
AGAAAGTATTTCGGCGCCGTTATCGGATGGGTTGGAAGCTCTTCCTCAGGATTGTG