| Morex x Barke POPSEQ 2013 | Oregon Wolfe POPSEQ 2013 | Morex Genome Release 2012 |
|---|
 |
 |
No map location |
Predicted Genes from contig_48921
| Gene ID | # CDS Predicted | Max CDS Length | Probes in Cluster | FPKM by Treatment | FPKM by Replicate | Top Rice Hit |
|---|
| MLOC_64505 |
2 |
1184 bp |
None |
Available |
Available |
None |
CDS Structure of MLOC_64505
Contig Sequence (6271 bp)
>contig_48921 6271 assembly3_WGSMorex_rbca.fasta
ATATATCACCAAGAGACCATTGTATTGAGANNNNNNNNNNNNNNNNNNNNCATCTAGCTA
CTGCCTATGGACTCGTAGGTCTGATATGAACTANNNNNNNNNNNNNNNNNGAGCACCAAT
GAGGATGGCGAACCCCTCCAATGAGGATGGAGAAACAAAATGAGAGAGAAACCCATTACA
ATTTTTTCTTTCAATTATACCTACTATATTCTGACTTTACCATGGCTTATGCCCCCTAAT
ATAAACCATAGAATCATTAAAATAAGCACATAACGCGAAGAAACAAAACATGTTAAAAAC
CGAATAGTTTGTAAAGATTTGAAATTTACTTATGATTCTGTATCTCCAAAAATTCAGAAA
AAATAGGACAACGTAGGGAATTTTCATATTAATCTCGTGTAACAAATTCAGACACTTTTA
ACGTTTCTGTGATTTTTAGAATTGTTTCTATCGAATGGAAAAGTTTTTGTTTTACAACAG
GATTAAAGCAACTAATACCCCCACATGATCCCAAAGGCTTTGCTTGGTTCAAACACTAAA
TAAAACAAAACAATAACACAATTATAACAGTAGTATAATTGTGCAAACACTCAAGAACAA
AAAGCAAAAGTGAAAATAAATTTTATTCCTTGTGTTTCCTCCCAACAAGCTCTTTCTTTA
TAGCCATTAAGATAAGCTTGAGATTTTATTGATGCTCACATGCACTACAAGAAATCTGTT
AATCCATGACAGACTTATTATTTTGTCAAAATCATGACGGATCACGACCGTCACAATTGA
CATTATGATAACGACGTTAACATCCGGACACATCATCACCTGACATGGCATGCAACATGT
ATCTGACATGGCGGCCCATGTGATGATCAGCCCAATATTTCAACACGTATAGTAATGGGC
CAATTAGGATCTCAGCCCACTAAATTCAACTATTGGCCATCTTGTATTAAGCGTAATTAT
TTTTACACCCCATTAGGGCCCGTCCGTCTTTTGCCAATACGGTTTAATCTGTATGAGAAT
ACCACTATTTTGTGCTACAAAAATAGTAGGCTACTAATTTTGATTAGGTAACACATTTTG
ATACAATGTATTCTTTAACATTTCTTCTCATATCTAATAGAAGACAAATTACAAAAACAA
ACATTACAACCAGGAACATAAGCCAAATGGATCCTTGCAAAAAAAAAATACAAACAAGCA
CCAAACGCCCCCTGCCATGACTGGTCGTCCGCTCCAACATTGTAATGCTTGTTCAGGTGC
ACCACAACCCATGCTCCAAATATTATAGGGGAACATGGTCATCCAGATCTGTGATGCAAC
AACATAGCAGCAGCCTACAAAAAATGGTCCTTTAGAATCTAAAAACACCAAATCATAATC
ATCGATAGTAATCATAATTTAAACAAAGTAGTGTACACAAAAAAGTTGCATATAAGTATT
TATTACCAAAGTTAGGGCGACATAATTGATATGCAGTGAAATACAGATGTAGTTTGTGTC
AAGCATAAAAATTAAAATTATGTTAGAATTTGTTCATTAGTGATTTATCATTTATTTTCT
CCCCTATAAATGGTACAAATGATCTTTTCTCTACAGTGATATGGAAAAGTTGAAGCAACT
ATATACTTACTGTCCCTCCTAGTAAGTGATAATTATACTTACATGTCAATAGGTAAGGTG
TTCTTTCCTCTCTTTTCTAAGTACCACCTACCCTAAAGGAGATGCTCAAATAGACGGAAG
TTACAATCCACACTAGCAGACCAAAGGCGCGGCGGCAAGAGCCTATGGTGCATGTAGGTT
GTCTTTTGTTTCCTGCTGAATGTATTAATATACTGACCTTTTCTACTTCATTCTACCGTA
CATAAATGAACATTCAGTAAATACAGTGCCTAAATGTATTTTAGTATACTAATACATTTG
TTAGCTCGATTTAGACATGTGTCCATAGAAGGTCTGCATTGTTGGTCTTTGAGAGAACTA
GTTGTATAGTTTGGAATGGAAGAGAAATTGCGAACAAGAATAAAAAAGAGGGAAAGTCGG
AATCAGAAAGATGAATAACTATTTTCTTCTAATGCATAATTCTAATTGAGTAGCCATATG
CACCAATTGAAAATAAGTTAACTGGGAATAAATGTTGAACTTACAATTAGTGGATAAATC
ACTATTGTCCAGCGCTTTCAATGTGCAAGAGGGCCCGTATTTTATTTTCCGTGTTCTCTG
TTCTTGAGTGCTCCAATGAAGGTTCTTGAGAGCTGCAAGGATGGGTATTTATTTTAACCT
GCAAAGAAGATTACTCCATCAGTTTTACACTTCTGAAGGCATATGACCATGAGAAATTCA
ATTAGACTAAAAACACTATGATATTAGTGGATTTGGATGGATTGTTTCGCATTTAACAGA
GAAGCGAGACAGAAGGAGTAGAAAATATCATTGAGAAACAAAATAAAGGTCTGACAAAGC
TCACCAACAGAAGATCATATCAAGTAATGTTCATTATAGACATGATTAATATGGATGTGC
ATACAAAGCAAGAAACATGATTAATATGAATGTATAAACACAAGTATGAATATCACTCAA
TCAAGCACATATATGTAGCAAAGTATATACTCTTACATGGAAAATATCTACAGGACCAAA
GATAGCATATTTTTACGTTCCCATCAGAGAACTGTAGGATAATCCAAACGTGGGCTAGCT
CGTTGAGTCCGGTTAGGATTATTGAAAGGTGATCAAGCTTGTCGGTAATTAGTTTAGGAA
GTGATCAGCGCTGCCGTGTCATTAGATTAGATAAGCAAATTTGTGTCCGGCCAAGTGTAG
TACGTGTCCTAATTCGAGTACTAGTATTTGGACTTGTATGGGAGTCCGGCTAGGATTGTG
TGGCCGGGCCGTACTAGTTTGAGTTTAGATGTGTCCAGAGTTAGCACGAATAGGTTTACG
AACCTTTTGTACCTGTTGGGTGTGTATATATACACAGGGCATAATTGTCTTGCTATTGCA
CATTCGTAATATTCTTGTGGCAGTGATCTGAAAAAGGGAAACATTCTCTATTAGCTTTGC
TACTGCCTAGAAGTTGGCACACTACCAAGACATTTACTCAAACCTCAAATGACACCGACA
AAGTAATCTCATACCAATTTCCCCATTTAGCGTACAATGAAAAAAGTGCAACACTTGAGA
ATAATACGACGACCCCTAAAATGTTGGCAGGTGCAACACTTGAGAATAATACGCCTGTGC
GTGAGATCCCAATACGCCTCTACGACAAATCCCACAGCCAACATCCAGCAATGGAATCCA
AGCAAGAATATAAAAGTGTACCCTAAAATACATCTAGAACTCAAGTACAAGCAGGCCATT
TGCTGAGCTGCACTCACCATCTCACGAAATCAATGTGACTGGTGTCATCGTTGAGTGTGA
AGGAAACATCTGTGTTCCGCTCCGCCTTGCCACTGACCATCCCCACCAGACTGACCTGCA
GATCCCCCAACCCAAATAATAAAGTGTATAATAACGCAATACCTGCAAACAAATAGACCA
GGAGAAGCGTGTGGGGATTGGGTGACTCCTCGCTCATGTTGAATCACCGCTGGATGGAGT
TGGATCTGTGTCCACTACCGGATGGAGGTGGATCTGTGCCCCCCGCCAGATGTAGCTGGA
TCCATGCCCGTCGCCGGCTACCTTGGGGACTTTAAAATCCAGCAGTTAGTAGCGCCGCCA
CCCCTTCCACCTCAGTTCGAGGGGTAGCACTGGGCCGCTGTGTGAGCGCGATCTGAATGG
GGAGGGGCATGGCGTGGGCTAGACGGGGAGCATCCGCTGTGTGTAGATGGGGAGGCGCCC
GGTGCAGGATAGATGAGGAGGCGCCCGACATGGGGTGGTTCAGCGCCGTCGTCGCCGCCG
GTGCAGATTTGGAGCAACGCGAGGAGGATAGGTAGAGTGGTGGTGGCTGATGGTTCTTAC
AGGAGGATATGGGAGAAGGGAAGGGGAATTAGGGTTAAAAGGGCGGTCTTGAAAATTTTG
ACTCCCCGCGCTAGCGACTCAAAATTTTCTTTCTCGCGCGCACACTTTGTTAGTTTTGAT
CTATGTTTTTCTATATTGTTGATTACATCTCACAGGTGGGCCACACACATGACGCATCAG
CAAGAGTCATCCGTGACGGTATAATATTATATAAACAAAAAAACGCTAGACAAAACTAGA
CCGAGGTGATTGATCCATGACAGTTTCCACCACGACACCTACTATCCGTCATACTATAGC
TACCATTATGGATCCCTTTTGCATCTTCCTAATCTGCGACGGTTTCCATGATGGTTAAGG
CAAACGTCACCCGAAATCCGTCATGGATTAACAGATTTCTTGTAGTGATGAAAGATAGTA
GTTCAAACACAAAGAGAGAAGAATGTAGCATAAGACAAACAAATTTAATTCTAACATACT
TCCCATGCATAGGCATTTCATAAGCAAACAAATTATCACGACTAGAAATATCTACCATAT
GCATGGAAGAAGAAAGAAACAATAGCAACCTCAACATGAAGAGAGATAATTTAGTAACAT
GAATATTTCTATAACCATATTACCGTCTCTCGTAATAACTACATGTAGGATCATATTCAN
NNNNNNNNATATAGCTATCACATAAAATATTCTCCTCATGAACCACATGCATAAAATTTG
TATAATCTTCAAAGGTAGTGGGATTAACATTAACTGAAGTAATGACCTCTCCAAACCCAC
TTTTATCAAAAAAATCAAGAGATAGATAATTCTCCGAAATATTGGGATCATTACTATCTA
AAGTTGACAGTCTTCCAAACCCACCTTCAATATTATTGCAAACATTATTATCAATGTCAT
CTTCAACATGAGGATTACATAAATTTTCAAGATAATAAGAAGCATCACCCCAATCATGCT
CATTACAATGTGTAGTGGAAATGAAAATTTGTCCATCCCCAATCTTGTATTTTTCATATT
ATTATCCCAATTGACATTAATAGAATTTATAAACATCATCACAATCATGATTTTCATTCA
AGGAGATATCATGAANCACTTTATAAATTTCTTCTTTTAACATTTCATCACAATATTTAG
ATTCGTAGTTTTCAAGCAACACTTCAAAAAAATAATCAAGAGCACTCAACTCACTAGCAA
CTTGGTCAGGGTAATTAGATCTTCCGAAAAGATTAGCAAGTGGATGAGGANNNNNNNNNN
NTTACTTTTCCTATTTATTTTTCTGTTTTCGAGTGCTGACATGAAGGGAGTAGAAACAAG
CAAGCAAGAAAAAGGCAAATAGAAAGACGGCAAAAGGAAATTTTTTTGAAGTGGGGGAGA
GGAAAACGAGAGGCAAATGGCAAGTAATGTAATTGTAAGGAGATGAGAATTGTGTGTAGG
AACCTGATAGATCTTGACATGATCTTCCCCGCAACAGTGCCATAAATATTGACTACTCGT
AGGAGAGTCGGTTTCCCTCCAAGCTTAAATGGTGATGTAGCACAGGGACAACAAGTATTT
CCCTTAGTTAAGAAACCAAGGTATTAATCTAGTAGGAAGATACACAAGACTATGTAAGCA
ACACCTGCACGCAAATAGCAAATCCTCGCAACCCAATGCGTGGAGGGGTTGTCAATCTAT
TTTAGGTTAAGTAAGGATAAATTGATAGATGCAAATAAGAGTGATAGCAAATAGAGCGCA
TCAATGTATTTTTGTGTTTTTTGATAATATAGAGCTGAAAAAGAGCAAATAAAGTAGAAA
AGCAAATAGAAAAGTAAAGATTGCAAAATATATGATGTGAAGTAGACCGGGGGGTCGTAG
GTTTCACTAGTGGCTTCTATCGAGAAAATAGCAAGCGGTGGGTAGAAAAATTACTGTTGG
GCAATTGATAAAAGAGAAAATAATTATGATGATATTCAAGGAAATGATCATGTATATAGG
CATCACGTCCAAAATAAGTAGACCGAATTTTGCCTGCATCTACTTCTATTACTCCACACA
TCAACCTCTATACATAATGCATCTAGTGTACTGAGTTCGTAGAGAAATGAAGTAATGCCT
TAAGAACGATGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGAATAGATCCCATCGTTTT
ATCCTTTATAGAAATGATACATGCGTGTCATGTTTCTTTCTGTCATTGAGATTGAGCTCC
GCAAGATCGAACCCATCACAAAGTACCTCTTCCCATTGCAATATAAAAGATCAAGTTGTC
CACACAAAAACCAAATATCAGATAAGAAATA
