Map Locations of contig_48901 (9081 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_48901

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_64492 2 1666 bp AK360703 Available Available None





CDS Structure of MLOC_64492






Contig Sequence (9081 bp)

>contig_48901 9081 assembly3_WGSMorex_rbca.fasta
TCTTTGACCCCCCCACGAAAAGCGATGTGGCGCCGCCCCCCCCCCCCCCCCGCCGCGGGG
GGGGGTCGCGGTTGAATGGAATGTCGTATTTTGCTTTGGTTGCTCTGGTGCGCCTCCTAT
TGACTTCCTCTATCTCCTCTTTTACCTCTTTTCATGTTTTGAATTGATTTAGCCATTTGT
AGTCCATTTCCCATAAATATAAAACTAAGAGAGGGTATGTGGAATCCTTTGCATTCATTA
CTCATTAATACTAATATTGGAGCAAATATCTCTATTAGAAGAAATATCTTAATTCAAACA
AAGATGAAATGAGTGTAAAAATATCATTTATCATACGCTATGATTTTTGTCATACACCCA
TATATACGACTTTTCTTGGCAGAAAAATTTGGGTGTACTTCTTTAAACCCATGACTAATA
CTGGATCAGCCTTGTTGTGCAAAGTTGTGGTTGAGAGTTTGGTCCGGAGTACTTGAGAGA
ACCAAATGTTGTAGATACAACCTGGTTGTTGGCGATCAGTGAATCAAGAGGCTTTTCGGG
TATGCTTAGTAGCATATATTGTATGCACTATAAGTGGAAGAACTATCCATTTGCTTGGCT
GGGGCATGTTAAAGCTTGCACAAACATACTTGAAGCTTATGTGGCACTATAAGATCTCTG
AATTTGACACTTTTTTCAGCATGGTAGGTTATCACAATGACATCAATGTGCTTCAGCGGA
TCTCCGGTGTTCACACGACTTGCAGAAGGTAACTGCCCAGAAGTCAACTTCGAGGTCAAT
GGTTACCACTACAACAAGGAATACTACCTAGCTAAAATGGCATCAATCCCAAGTGATCAA
CTCTTGTGAAGACAATCTCCAAGCCGGTAGAATAGAGGCATGCTAGGTTTGCCCAACCAC
AAAAGAGCTAGGAAGGATGTTGAGCGTGTTTTGGTGTGCTCCAATCTTGATGGGTTGTTG
TCCGACATCTTGGTAGAACATTCAGCCAACGGAAGATGTGGAATATGATGATTTCTCATG
TGACATGCATAACTTAATCGTGGAGGATGAGCATGATGACAACATCTTCGACTAAGGATT
TGATTCCGAGGGTGAAAATGTTGAGCATGGGCATGGACCGACAACATTTGAAGAGTTCAC
CCAAATTCATCATGAAATACGTGATTGTATAACTCACATTCAACTTTAAAATGATTTTGT
TGAGTATACATGGACTCACCTAGCTAGGCAACTAAAAATGTATCATAACTTTTTATTTGT
ATTCATGACAATTTCAAATTCATTATGTAAATTATGAAACTTTTATTTGGTTGTGAACTA
CTTCTTGTGATGTAAAACTATGTGACATTTTATATATATACATAAATTGTAAATGTTAAA
TTTCTGGCAAAAACTGGACGGACCAAATGTGTTGCTCGGTAAGATGCTATGACATCGAAA
ACACAGACGAAAGCGGACGCGCCTTTTCGGCTGATCCAAAAGGACAATAAACAGTAAAAA
AAATGTCAGTTTATGTCGACCGGTTGAAGTTGGCCTAATGTGTACTCGTTTCATAATGTA
AGATGTTTTTACAAGCTAAACCAGCTTAAAAATGTATTATATTATGGGACAAAGACCGTG
TAGATCACTACTTACATTGCGAGACAAGATTACTGGTTGATATACGATGATGCGTGGCAG
GTGGCTCATTCGGTGATCCTTCGTGACGTCAACCTTGCCTAGTTTTCTATAGTCGCAGCT
GCGTTGTCTAGTTTGGTTTGTATGAAGTGTTATGGTGCAGCCATTAGGATTGTTTTTTTT
CTTTGATCTTCGGATCTTCTGGTCCTACGACCTTCATCATCTTATTGTTTTCCGTTGCTT
CATGCTATTATTAATGAATGACAAAGATGCTTGAACTTTAAATAAAAATTACTGGTTCAT
ACCAGGACGATGGGTCTCTCGATTGTTCCATTTACCGGCCACCCATCGCGCTGTATACTG
TACTGTATGCATCACACCCATACGTTCCGTTCGTACACGTGGCAGCCGTCCCTCATCGTC
CTGCCCGTGGCCCCACGCCCCGAGTCACCTACAATTATTCAGCGTACCACTCCGCTTGAT
TTTGTTTCCCGGCCTCCGCTTTATAAGCACGGGAATCCCCAGCCCCAGGTACGCACGGAG
AGGCTCCGGCAAATCAAATCACACTCGTGCCAGAAGACGAGAGCCCCCCGTCCCCTTCCT
CCTCCACCGAGCTCCAGCTCCCGCTCCGGAGGACACGGGCCATGGCGCCCCCTCTCTCCT
CCTGGCCATGGGCGAGCCTGGGCATATACAAGGCACGCACCGAGCACCTCCTTTTTTTCA
TCCTCGCCGCCCGTCTCAATGTTTTTCCTCGTTGACTGACACCGCCGTTGTGCTGCAACT
GCATGATCGCCGGACGGACGCGCGCGCAGTACTTCCTGCTGGCCCCGCTGGTGTGGAAGG
TGGCGCAGGAGTGGACGGAGCAGGGCGGCGCGCCGCTGGGCTCGCGGTGGCTGCACCTGC
TGCTGCTCTTCTCCGCCCGCGGGCTCACGTACCAGTTCTGGTTCTCCTACAGCAACATTG
CTCTTCCTCACCCCGCCGCCGCCGCGTCGTCCCCGACGGCGTCGACTTCCGCCAGGTCGA
CCACGAGTGGGACTGGTACGTACACTCTCCCCCCTCCTCTTTCTCCTCGAGCTCGGCACG
CCACCTGCATGCCGGTAGCTCGGTAATTAACAAGCGCTCTAGTAGTTTTCCTGCCTCGCT
CCCCAGCTACTCCGGAGCTCGCTGCTTCAACGCGAAGCGCGTGGACACGAGTAAGAAGCA
TTCCACGAGTTAAAAAAAAAAAAAAAAGGTGCAGCACGACAGTTAGTTTATGGCGCCATT
GAATGCAACTCCAGCCTATAAGATGGAGCATTTTCGTGTCGAGCGGTCAAGAATGTTTCT
TGCGTCTAGACTCTACAACTCTAGCTAGACTCCGTGGAGCCAAAGAGATGTTGGACACGT
CGGGCGCTCCGGCAATTGCCATAGCATTCCTCCAACCGCCATGACGTTTCCCGACCTCCC
TTTTTCCCGGTCAATATATGCCACGCATTATATTGTTTCAACAATTTACGTCGGCATACA
TGTTTTCTGGTGAAAAAATGATTTGAGCTGACAACAACTGCTTCCTCCGTTTCTAAATAT
AATTCTTTTAAGATATTTCATTAAAGGTCTACATACGGAGTAAAATAAATAAATTTATAC
TTTAAATTATGTCTATATACATCCGTATATAGTTTATTAATGAAACCTCTAGAAAAACTT
ATATTTAGGAACGGAGGGAGTAATAAGTACAGTAAGCCGGTAAAACGGTGTAAGTTTTAT
CTTGTCATTTTTTTCAGAGGGATGAAGTGATTGTTTTTTTCTTTCTTGCTCTGTTGGACC
CACCCGCAGGGATAACTTCCTGGTGTTGCAAACGCTGATTGGTGCGGCGCTAGTCAACGG
CCCGCTGCTCCTCCCGGGGCTGGAGAATCTCCGCGTGTGGGACCCGCGGGGGCTGGGCAT
CGCGCTGCTGCTGCATGTGGGCTTCTCAGAGCCCGTGTTCTACTGGGCCCACCGGGCCCT
GCACGGGGCCCCGCTCTTCTTCAGCCAGTACCACGCCGGCCACCACTCCACGCCGGTGAC
CCAGCCACTGACAGGTACGTATGTACGCGGTGCGCAGCAAGGAAGCACGGCCGCTGGATC
GCAGCCAACCCAACCCAACCAAACAGCCCGAGTAGCGAAAAAAGAAGAGAGAAAGCATGT
GTGCCCGTGCTGCATGACAGCCCCGTCTTTTCTCTGTGATTCGTGACATGCACCAGACGC
CACTACCAACCAAATTGTGGCACGATATTCTCCCTAGTAGAATGCGATTTTTACCATGCC
CGCAGCCTTGCATGCAGCATCAATAGTTACCATGCAAGTTGTGAGTTACACAATACTATG
ATTAAAGAAAAAAAGTTGTTTGTTACAACTTACAATTACTGGTAGGAACTAGGAAGTATT
TCCACCCTTGACCAAGTTTCTTCTTCTTCTTGGTGTTTGGTCGCAGCTGGATTCGGCACG
CCGTTGGAGGCCCTGCTGCTGACGCTGACGATGGGGGTCCCGTTGGCAGGGGCCTTCCTG
ATGGGGGCTGGGTCCGTGGGCCTGGTCTACGTGCACCTCCTCACGTTCGACTATCTTCGG
AGCATGGGGTACAGCAATGTGGAGGTCATCTCTCACAGGGTCTTCGAGGCTGTCCCACCG
CTCAGATACCTCCTCTACACCCCGACGTAAGTCCAAATCCTTTTCTCTCTCACATTACAA
TAGCACTAATATAAGAGCGTTTAGATCACTATTTTAATTATCTAAACATTTTTATATTAG
TTTAGAGAGGGAGTAGTAGGCAATTATTTGGCCGTAAAGGCAGTCATTATTCACGCGTGG
TAAAAAAAAAAATCCACCCCTCTGCCGTCTGCATGTGACACACTAGGCATCCGTTATCCT
CTGCAGAGTACAGTAAAGCTGTTGCAGTAACGTGTTTGTTTCTTTACGTCCTTCTATCAA
GCGGTTGCAATGGAAATTAAAGTTAAATTTGATGGTAATGTTTTGGTATATGCAGGTATC
TGAGCCTGCACCACAGGGAGAAGGACTCCAACTTCTGCCTCTTCATGCCTCTCTTCGACC
TCCTGGGCGGTACCCTAAACTCCAAGTCATGGGAGCTGCAGAAGGAGATCTACCAAGGTA
CGCAATTAACAATCACCCAAGGAGGCCGAGGACCCTACGCTCATCAATTTTATTCTCACA
CAGTAGTGCTAGCAGTAGTCGCATCGCTAGCATGCGCACCGCAGGACGATCGAGTACGAA
CGAGCCGGAGCAACATTGATTGACGAGGCATGCATAGTTGCATACATGTGTTGCCGTGTT
GGTCCCGTTCAGTTCAGCAGTTCTTTAACCTGGTCCTGGTGACACCCTGCTTAACCAACG
CCCGTCTTTTGAGCGTGTGTGCGTACGTACATGGTGCATGCAGGGAAGAATGATGGGGTG
CCGGAGTTCGTGTTCCTGGCGCACGTGGTGGACATCATGTCGTCGATGCACGTCCCGTTC
GTGCTCCGCTCCATCTCCTCGGTGCCGTTCGAGAACCGGCTGATCCTGCTGCCCTTCTGG
CCCGTGGCCTTGGTCTACATGCTGCTCATGTGGTGCTGCTCCAAGACCTTCCTCGTCAGC
TTCTACTACCTCCGCGGCCGCCTCCACCAGACGTGGAGCGTGCCCCGCCACGGCTTCCAG
TACTTCATCCCGGCGGCCAAGGAGGGCATCAACCGCCAGATCGAGCTCGCCATCCTCCGC
GCCGACAGGATGGGCGTCAAGGTCCTCAGCCTCGCCGCCCTCAACAAGGTGCGTCGTGGC
ATGCATGCACTGCACCAGCACCATCCAGCCATCCATTAATGCATCAAACCACATCTTCTT
TTCCTTGCCTTGGTTATTATTGATTGGAAGTCTACTGGTATATGCTACAACTTGAGAACA
GAAGCATGGCTTTCTTGTGCGCCTTTTTCGTTTTCGCGGATGCTGCAGTGCAACTACTAC
CCCATGCCTCCTCGTTGCTGGTGTGTCCGTGTCTAGTTGGTGTGTAGCACAGTGCTCCGG
TACTGCTAGCTAGGTAGGAGGAGAGTGGTTGCTCGGTCAATTAGACGAGAGATCAGTTAC
AACGGGAGCCGGGAGGCATGTGAGCGCATTGAAGAACGGCAATGGCCGGCGAGCCACAAC
GCACCGGGGGAGTACACGGTCGAGATCGGGATCGGGAGGTCGGCCATGCAGAGGCACACT
AGACGCTACTGTGTCGTTGGCAGGAGCACCATGCGCTAGCTAGCAGCACCAGTGGGTGGT
GGCGCGGCAGCAAAGGTGGTGGTGGCCAACTTGTCCTTGCCGTTCACGCTTACATGTGCC
TGGGGACAGCACTGCGGCTGCGGGTGGGCCACAAAGCCATCTATCCATCGATAGCCGGCC
GGTCTGAGGCGTTTGCCGTGGAGCGCTTTGGCACGGCCTTATCCTGTCCTCGCTCACGTG
GCCCAATCGCGGCGCGGAAGCTGGTAGCGACTGGTGCATGCATGCACCAGCAATGGCGAA
GCACTGTGCGTGGATCGAGGGGCACAGGGCTTGCAGAGGGCCGGCGAAGAGTCGGCCTGC
GCCGTCCGTCCGGGTGGTCGCGCGTGGGTTGGTCGCTGCCAAAATCTCTGCGTGGATTCG
GCGGCCTGGTCCCGCTCGAGCTCCAGGCCTGGGCCGTGCCTGTGCCGTGCTGAACGAACG
GTGGCCGGCAGAGAAGCTAGTACAGTGTACGCCTGTATTGCTGTACCTGCACAATTCCAA
ACTGTTTTCTTAAAACGCGGATCTTTAAAGAGAATTGCCAGGTTAAATAACAAAAACCCG
GGCAAAAACCGTATTCCAAACTGTTTACAATGACGGGTTTATGCGAGAATAGTGCCTCGC
TGGAAGCATCCAGTTTCTGAACAATCTTTTTCTAAGAAGTACGTATTATTTTTTATCGTA
AAAACTCTCGGCTAATGTTTTTTTTTACCAGAACGAGGCATTGAATGGAGGTGGCATCCT
GTTCGTGGACAAGCACCCTGACCTGAGGGTGAGGGTGGTGCACGGCAACACCCTCACGGC
CGCCGTGATCCTGAACGAGATCCCCAGCAACACCAAGGAGGTGTTCCTCACCGGCGCCAC
GTCCAAGCTCGGCAGAGCCATCGCCCTCTACCTCTGCCGGAAAAGGATCAGAGTCATCGT
ACGTATCCGTATATCCCTGAGTTCACAAAGATAGCTAATTCAGAGGGGTCAACTTGTTGT
GACAATTTCTCTTTGTTGCTTCAGATGCTGACGATGTCGTCGGAGAGGTTCCTGAAGATC
CAGAGGGAGGCGCCGGCGGAGTTCCAGCAGTACCTCGTGCAGGTCACCAAGTACCAGGCC
GCGCAGAACTGCAAGGTCTCACCGGCGTTCAGCCATCCGATTGCTGATCAATCTGTAGTT
CTGTACCGCCCTTGTATGATGATGTGTTACATGATGGTAACGTTGGGTGTGCAGACGTGG
CTCGTGGGCAAGTGGCTGTCGCCGAGGGAGCAGCGGTGGGCGCCGCCGGGGACGCACTTC
CACCAGTTCGTCGTGCCGCCGATCATTGGGTTCCGCCGCGACTGCACCTACGGCAAGCTC
GCCGCCATGAGGCTCCCCAAGGACGTGCAGGGCCTCGGCTCCTGCGAGGTAACGCACACA
GCGATAAAACTACTACCATCCGTCTGATGATCCACGCCATGCCATCCCGCGTGTACTGAC
GGCGATCGATGGCTGCTGTGTTTGTGTGTTTCAGTACACGATGGAGCGAGGGGTGGTGCA
CGCGTGCCACGCCGGCGGAGTGGTGCATTTCCTGGAGGGTTGGCAGCACCACGAGGTGGG
CGCGCTCGACGTCGACCGGATCGACGTCGTGTGGAAGGCGGCGCTCAAGCACGGCCTGAC
GCCGGTGTGATAGCTCCCTGGACGACGCAGGTGCGGAATGCAGCCGAAACGAAGCAACTA
GGATCGCTCCCTCCTCCATCCCCCATGTATTGTATTGTACTCCACTCCATTCATGTCAAA
TGTACCACTAATACCGGTTTGACAAGAGACTGGATTAATTGAACCACCCAAGGACAGCAG
CACACCTGTTCTTGACTCGTCTTTTATGACCAAAGCCCTCCAAAAGGGATAGCAGTAGAG
TTCATCAGTTTATCATCTTCGTGTTTACTGATCGCTATGTAATCCTATTCGCGTTCTGGG
TTCCTCAACCTCCGTTCCACTGTCTCTCTCGTCGACACTTCGACCAAGAAGGAACGACGA
TCAATCAAGGCCAAAGAGGGGCGGGAAGATGCGCCGCGAAATCTCGGTTTGCTTGGGCCA
GTAAATGGTCGTAGTCACCACCATCCCACTCGTCCCGGTAGGTCTCCGGACGTTCTCCCA
TGACCTCTATTGCCGCGGCGAACATCTCCCTCCTCCACTCCTCGGGCCCGTCCCGCCGGC
ATTGCTCCGCGAGCCAGTCCTCGTTCTCGAACTGCAGGCATAAGCAACGTCAACAGAGAA
ATCCCACCTCGCCGGGGTCGATCTAGAACAGCAACGAAAACAATCTTATTTCGGACGAAT
TTCGCGGCACCTCGCGATCTCGCAGTCTGTGGGTGTATCTTCGGGGCCATCCGCGAGCGC
CCAAACGTGAGTAGAAGGCCGTCACGTCTCGCATCATCTCCTCCTCGGACGGGAGCTGGA
ATCGCCCTGACAGAATGCCGGCCACCCAGTGGCTCTGGAGCTCGAATAGTGGAAAAGGGA
TCACCTGGATGCAAGTACCGAACAGAGTCAATCTAAGATACATTTTCAAGATCGCAACGT
TTTCTATATGTTCTTGGATTTGATACACGAATCTAAGCAAAAGCCGGGTGAGTTTCGCTG
GAATCTAAGCGAAGATGGGTCCTCCACGGTACTCTCTATCCGTGGCGGAGCTTGGGCCAC
ATTTCAAGAGGGGCAAAGGGGCTGGGGAGGGGGCGAATTTCAGTGATTACATGGCCAATT
TACTGATGATAATACAAACAAACCTCCTGGGCTCGGGGGGCAATGGCCCAGGTTGGTCTC
CACAAAGCTCCGACAGTGCACTCCATGTACCAGGCGCCTTCACAAGATTTCAATGAACAA
TAACATGAAAAAAGGAAAATTGAAGGTATCACTAAAAATTAAGATTTCTATGTGGTAGCT
TCGCATAGGTATTATCTTGACAGAGGACAACATAGATGGCCATAAATGGCAAGAAATCAA
TAAGTATAGTTTTTGTGCTCAGGACGAGAGACAATTAAACAAGTCTTCTTTTAGTGCAAG
TTCACGCACTCCATGTGGTCAGTGCTCCAAATAACGTTCATTTGTATGGGTAAAAAAAAA
TGCTGTCAATATATATTTCCAGAGATATTGTGATCATTCTTCCATGCAGATTATCTACCC
TATATTCATTGGCTTTGTAGGCTTGTATGTAGTCTATGCAGTAGCGTAGCCAGATCAGTG
TGCTAGGGTGGTCCAATAATA