Map Locations of contig_48866 (9399 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_48866

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_64465 1 1245 bp MLOC_64465.1 Available Available None





CDS Structure of MLOC_64465






Contig Sequence (9399 bp)

>contig_48866 9399 assembly3_WGSMorex_rbca.fasta
GATTAGGGACGAAATTGAAGATCACTCGACCGTTTCTTTGTACATATTAAATCTACATGC
AAGCCGTATTAAAATAAAAGACATGTGAAATCTTGAACTACGTTTTTGTAGGCTAAGATC
ATCTTTGTTTTGGTCGTACCTACAAATACTCAAATTATAGATCACTTTTTGTAAATGAAA
AGTATATGTCATATTTTTTTTTTCGTTGCAACGCTATATACCTTCTACTTTCCCTCGCCC
ATGTTCCATGATGGATTTCTAGATACCGAACTCGGTTGTTGTCGTCAACGGTGAAGACGA
AGAGATCGACCGTGCTGAAAAAAAGAAAGGCGTGCGCGCCGTGTGCGTGTCCCCTACCTC
GGGTCGCCGATGATGGGTGTCACGGCGCACTCCGGGGTACCGGACGCGCCACTTGAGCTC
CTCACGGCTGCTCAGGCCACCATCCCTTTCGCCACCACCACCAACGGTCGCGTCGTGATA
TCTCCACCCCCCTTTTCCTTGACGAATATCGCTACTTGCAGATCAAAACTATGACGAATG
AGAAGCCTCTGATGCACATGCACAGGCGAAAAACTTCCAGCAAGGGTTACATGGTCATTG
ACTCATTAGTGCAGCTCCTCTGTGTTAATCGGCCACACTGCCAGAGGCACATCATGCGGT
CAACTTTTGAGTTTGTCACTGAGTTACGACATCTCAAGTTGTGGCATCCATTCAGAGGCA
AATTTCATGTATTGACCTTTTTAACATAGTTTAGCAAGATCTCTCCCCGTTTTAGAAAAA
AAATCATGATCTGATCCTTTTTCTATCGTCAGGATGTTGGGGGTAGGGTTACACATCGTA
CCGCCAGGGACACTGGTGGTAGGCTGAATGACAACAACCATCAACTGGCGGCCGTAGGCT
GACATGGCGTATCACCCTATCGCCAGGGCGTGTGACAGTATGTTATGAGATCCTACCGTC
AATGTCTCCGGCAATAGGATGGCTGGGGGTGGCTTGGAAGGTTCTGTAAGTTGCAATCAT
CGAAGCTTTCCTACCGTCAGGATCCTTGGCGGTAGGGTGTGTTCGCACTACATTTTTGTA
TAGAATTTTTTATGTTTATTTTCATAAATTTTGCCACAACAACATTTATAGCCTTAAAAA
CAAAAAAATAAAATATGAAGATCTCATAGAATATAACATGTATCACACTAATAATATTCA
ACTAGTAGACGTATCACACATAGCAAACGGTTCCACATAGTTCGACAAATACCAAATAGT
TCCACAAGCCAACACAAATAGTATAACTAAGCAACTTCACTTGCTCCTTTCCCACTTGGA
GGTATGGTCTTTGTTGTTCTTTGAACAAGTCTCATCAGGCTTTTTCTTACGCTGACGAAG
ACGCGATTTCTGAAACGGGGACGGACTCTGTCAATCCTTCTTCGGTGCCTTCCTCTTCTC
AAGCTGAGTTGTCCGAGTTGGTGGAGGTCCGTCATCGTCATCGTACTCCTCCTCCTCCTC
ATCATCGCTCCCTTCCTCTTTTTCCTCTTCTTCATCGTCCTCCTCAACCAATGAGCTTTA
GCAGAGCCAGCGCAGCCAAGCAGGCCCATCAGCTAGCGACAATGTTTCATGAACTTCTGC
AATAAGAATGAAACGAGGACATAATATAGACCAAATTTATGATCACAAATGAACAAAAAC
ATAAGGTAATTCTGGGAGGTTCAAATGTTACCATCACCGTTTCACTCAACTTGTCCTCAG
AATCTCGGGTCCCATGGCACCACCTAGCGCATCCAAGCCAGCAAAAACGCATTTGTTCAG
CTCCAAGGACTGCAAAGTAATAAGTGAGTCACACTGACAAATAAAATTGATTACATCCAA
CCAGTGGTTCAAAAGAGACGAACACAACTCACCACTCTGTTTATCAGGGGTGCATACTCC
GTAAATCCACTCAGGTCTCTCATGTCGTTACGGTAGGCCTGATCCACGGGGTCATCCTCT
TCCGGCTCTGCGATATCTGTTGTCGTCCACTCGGGCCTGAGGCGAAGACGGTGCTTCACA
CCATCGTCGTACAACTTCATGTGTTCATCGTAGTATTCTCCCCAGCCAAGCAGTTTCCTC
TCCCCTTCTTTACAAAATTTATGTCGGTTCCACTCTCTCACGTGATCTTTATACTGCAAA
GACAGTTCCGCAACTCCTACCAGTGAGTCCGGTCCAAGGTTGCGGAGCGGAACGAGCGTC
GTTGCCGATCACACACAGGTACAGAAAAGTAAATTGACACAGAAATCTAGAGAGGAGTCT
TTCTTTATTAATCATTGACCAACTGTATGTACAAAGGATGCTCTCCTCTTTATATAGCTA
GGGGTAGAGAGATAAGTGCCCATATTAACATTAAGTAAAGAAACGTTCGGTCAAAGAAAG
GATGTTGCCCGAGTCGGGCCGTAGCACTCCTGTCGGCCCATTAGTTTCCCAACAGGTACC
ACTAGCACTAGTAGAAAAAGAGGGCTTTGGTCCAGGGCCTGCAATACCATTAGTCCCGGT
TCACCCACGAACCGGGGCCTATGTTGTCATTGGTTCCGGTTCGTGAGGCCAGGGCGTCAG
TCGGGCATTTGGGCCATTGGTCTCGGTTCGTGTCAACCTTTTGGTCCCGGTTCCGGACAC
GCACCGGGACCAATAGGCCAGAACCGTTCGTATCCACCTTTAGTCCCGGTTCATAGAGAA
TTTTCATACATGCCTTCTAAACCGTGACGGAGGGAGTACCTCCATAATGGATAGTAACAT
AGGGGTAGTAACATTGAGCCTTTCTTTTGTTAGTTTATAGAATCATCTTGACTTGGTATC
CGTTATGTTACTCCTAGTATGAGTAGCATGCTAAGGCTGTCCGTAATGAGAGTATCATAG
ATGGTATTATGCATGTCAACTAAGCAATCTCAATGAGGTGGCATAGAATTAAATGAAGAA
AGAGAGGGTTGGGTATCATTTCATGATACCGTATCATATTAAATGATGTGCTACTATCTG
CATTGCATGGTAATAAATGAACTATTCTATGATACTAACATATGATACTCTGCATTATGG
ATGTGATATCTTAGACTAGTATTATATGCACGATGCTAGTATATGATACTATCCATTAGA
ACCAGCCTAAGTTACTCAATTTCTTTCTTTTCTTATTAATTGATTGTCACATCATATTTT
TTTACTTAGCTGGCATCTACTCCCTCCGTTCCTAAANATAAGTCTTTTAAGAGATTTCAA
TAAGAGTCTACATACGAAACAAAATAAATAAACATACACTCTAAAGTATGTTTATATACA
TCCGTATATAGTTTACTCGTGGAACTTCTAAAAAGACTTATATTTAGAAACGGAGGGAGT
ACGTTATTACCTACGTTACTCATATTGCGGGTAGTGTGAAGGCCATCCAATCATCATGTC
AAATGGTGTGGTGTGTTGTGCTGCGGTGGCCCTCTAGACACCTCGCACTCTGCTGCCCTG
CCCCCCCCCGGCGAATCGACCGACCGGCCCCATTCCCCCACGCCCACTCGCTTTCTTCCT
CGTAGCATCATTTCCGGTCGATCGATCCATCACCAGCGCCGTGATCGCACCATCACTGCT
ACCAGTACACACTACAGCATTGCTACTGCCGCGTAAAGCCGTGGCCTCGTCTGGGAGTCG
TCACCTGCTCTGCTCGGCGCGTTCCTCCGAGCCTCAGGAAAGCCGGCTCCGACATGTATG
TATGTATGTATGTACAGATTCGTCTCGAGAAATAATAAACGTACAGGTGGCTGCTGCGAC
GAGGCCGACGTAGTGCTTGGATCGTTCCATGTCGGCGTCAGTGAGTGTTTTGGTCCACGT
CATGGTCATGGGCATTGCCGGGTGGTCGGGCCATTTGGACGCGTCTCTGGCTCCGTGGCA
TCTCATGAGAGGAATATATTACTGTCAGTCCTATTCTATGGTTAAGGACTTATAAGGCGG
CCGACGTGTACGTCCAATCTGATAATGAAGGAAGAGAGAAAAACAATAGATCCGCGTGAG
GACGACAAGTCACTGACAGGGCATGCACGGGCTGATCGACCCAGTGATGAGTTGAGTAAC
AGCGAGTGACAGATCTACTACTAGTACCATCGATCGACCTCGCATGTTTTAACTGAAGTA
TAAAAAACACTTGATGAGGAAGAAACAGGTTGTCGACAGGCCAAGAATACACGCGGTATC
TTCATCTTCATCTTCCCCATCGATCATCCCATCACGATGAGCACCCACCCACTCCCCATT
AAAGCATGGGTCCGTTCCCGGCCTACATGCATGCATGCATGCATGATCCACGCACGTGCC
CCCACTGGCATGGCCATGTATGTTCTCGTGAGAGGGTTGATGGGCAGGAGATACGTCAAT
GGGTTTTGCGTTGGCCTGTCTCTTGGCGTACACGTATATACGTACGGCACGTACCTAGCG
GTGCCTGCCACTTTCCCTCGTCCATTTTCATTGTTCCACTTGCATGATGAATTTCTGGAG
TGAGCATATATCCGATACCGAACTCGGTTGTCGTCCGTCGTCGACGGTGAAGACGAAGAG
ATCGACGGTGCTGAAAAAAGGAAGGCGTGCGTGTCCCCTGCCTCGGGTCGCCGTCGGTGT
CCACCGGATGAATGGGTGTCACGGCGCACTCCGGATTACCGGACGCGCCACTTGAGCTAG
CTCCCTCCCCACTTGATCTCTTCACCCCTTTTCGCTAACGAATATCATCGCTACTTGCAC
ATGAAAACTTTGACGAATGAATAGCCTCCGATGCACAGGCCAAAGTTCAAGGCGAAACTT
TCGGAAGGCAGATCATTCGGTTCGCTTTGGGTCGTCACTCACGGAGAAAAGCCTTGTAAA
CTATTCCCTTCGTTTTTAAATATAAGTTTTTTAAGAGATTTTACTATAAGTCTATATTTA
AAGCAAAACAGATGAATCTATACACTAAACTATGACTATATACATCCGTACGTAGTCTTC
TATTGAAATCTTTTAAAAGACTTATATTTAGGAACGGAGGGAGTAGTGTAATGGCGCTAG
CCTGGACCTTTCGCATCCTATATTGGTATGGTGTGCTTGGATCTCTCAAAACATTCTTTG
CATGACGAAACTGTAGCGAGTTTCAGACCTGCAGTTACTGCTAACGAAACTAATGAGTTT
CTGTAGCGAGTTTCAGACCTGCAGTTACTGCTAACGAAACTAGTGAGTTTCAGATATGTG
CCGTGTTTCGGAGATGTGCTTTGTTTCAGGGACGTCTTCATGACATACATGTCGAGGGAT
GCCATGAGTGGTTAACTAAAAAAAATAGACGCGGCTGATTCAGATTGTGCTCGTCCGGAA
ATACGGAAATGATGCACAATCAGACCAAGCATACCAGCAACCACCTGACAAAGTGGGAGC
AGCAACTAATGAAAATGAAGCATAACTGGAGCAATCAGAAAACGCCACAAGGAAAGGCCT
TCTATTTTCTCCGTATCTAAATAATTGTACTTGGAGAGAACTATACTAGTTTCCCCAACT
ACAATTATTTAAGTACGGAGGGAGTAATAAGTAGTGGTACCACTAGCTTTGGTTATGTGC
ACTTGTCCTTCCATTCCTCCAAATGTTGTTGCATAATGAAACAATAATGAGTTACAAGTT
AGGTGGTAAGAAAATGGGTCAAGCAACACCGTGGATGGATTCCCCAACACCGTTTTACAC
TAAAATCCAGCCACCAAACACAATAAACATGCCAAGGGTCCAATGTGACGGTACCACTAG
CTAAGGGGTTTATCAGGAATCAACTGACAAGCTGGGAGCTATGATATAGTTCAGAAAAAT
GAAAATGGGGCAGTCAAAATCAACTTGAGCAACCAACTATCACAAGGATATGAGATGCAT
GAACTCACACATTTAGGAGATTGGATCACAAACTATATCATATTATGCTCATGTCTGTTA
GCTAGGGAACCATTTGTAACATAGATATGCAGAAGAGCCAGAAACAACATAGGTTCCCGC
AAAAGATCTTAAACACCATAGGCTGAAATGGATATCATTATTACTTGTAAGCGACGTCCT
TATAAATGTGTGCGTTACATGATAGTGCAACTCCTACCGCTGATCAACCGCCGGAGGCAG
ATCATAAGGACTAGTCCAACTAATCAGTAATCACTGATGGAGGAAAAGGCCTTCTAATAA
TTAGCAGCAGCACTTCGACTAGTCCAACTAATCAGTAATCACTGAAGGAGGAAAAGGCCT
TCTAATAATTAGCAGCAGCACTTGGACTAGTCCGACTAATCAGTAATCACTGACGGAGGA
AAAGGCCTTCTAATAATTAGCAGCAGCACTTCGTATACCTGTAGTATGGCGCTATCCTTC
AATTTCTCAAAACACTAGCATAAGCAAGCTGCAATGAGTTAAAAGTTGTATCAATTCTGC
ACAGCAGATCACAGAGCGATGAACAAAACACAAGTGGTCATCATCAAAATTGCAAAGACT
CCCATGTTCAGCAGCAACACTCATAATACAAATTGCTACCTTGTTTCAGAGACGTCCTAC
TGATATACTCCCACCGTCATCCAGAAACACATGAAAAAGAATACGAGTCGGAACAAGCAA
TATCAGAAACCAACTAATCAAGTGGAAGAAGCTTCAAACACCAGAGCAAGCAAGCAATCA
ACACAGGACTTGATGCACACATTGCAGATTTCATCACAAATTACGTCATGTCATTATTAG
CTACGGACCATCTGTATCACAGATAAGCAGAAGAGGCTGCTGGAATACCATAGGTTTCAG
CAACCGACTGCGACGATGCATAATGCTCAACACAACTGAAGGTAGTCTGTTACAACCACA
GATAGTGAAGCGCGACACAGATAGGTAGATAGATAGATTATCATTTTCTGGGCATTACGA
ATGGGCAGGCAGACTCATTTCTTCCCACTCTTCTTGAGACCAGATCCTCCCAGCGCACCC
TTCTGGCCAGCCTTGGCCTTCAGCTCCTTCAGGGCCTGGTTGACAAGAAAATAACGTAGT
TCACATCAGAAACTAAGGTCATAGGACAAGCAGTGTAGAAGAAAATACTGGATAGCGGTT
ACTGGTCTCACCTTTTGCTCATCCTTCTTCTTCTGGAGGTATGCCAGGTCATTCTGCAAA
ACAGAGGAAACCAAAACAATGGTAAGCATAGGTAAGTGTAACAGGTCACTGAAGTTATCG
CTTCTATAGCACATGGACTAGTTTTCCAAGCAAAGAAGGGTCCTTTTATGAGGATGACAC
AAAATTCAGATAGTGTTGCTCTCCCGCATCATCATAACACTTGGAAATAATTGCCACTGT
GAAGCTCATGTATCTAGAGGATGGTAGTTCTCCCGCATCATCATAACACTTGAAATAATT
GCCACTGTCAAGCTCATGTATCTAGAGGATGGTAGTATGGTTGGGAGTACCAAATAAGAT
GACTGAAATCTAGAGTTACAACTGCCGGAGAAAAAAACACCAGGCTCATAAAACTTACGA
AAACCACCACTTTCTTCAGAATTAGATGAACCAATACGGTACAGTTGAAATTTAGGGTGA
ACTAACTGCCCTTGTTACTCAGATTTTGCTGCAAATTCTACATAGCATATTCACCTTAGA
CAAGCCACGACCACACATAATGTAAGCCAAGCAAAAAAAAACAAAAAAACAAAAAAACAG
AGGGCAACTTGGTGCTACATCCGTGTCAACGCGACTGAAGGTAGATTGATGTTACAAATA
CAAAAACTAGCACTAGCACACATGCATAACATTGCTCACTCTCTGGGACAACTATCGCTC
CAGAAACTGCAAACATCAGAAATTTGGCAGCCATGTGACAACCCCATCCAGCACAATCGG
TAGAAACAGCAGCAATCAGGCAAACACCGCTCCTACTATATCAGGACCAAGCAAGGCGCT
TGTACTCATCCAAGTCCAATCATTCACGACCCCCTAATCGTAACGAAATTCCAGCACGGC
ATAGCTACGCACGCTCGCAAAAATCATATCCCCCCTAACGGATCATCCCCGCAACTACCC
ACCAAGCACGGGCCGATCTACGCCCGAGCAGCCTAGACACCACCAAACCTAGAATTACAG
GGGCGGATCGCTGATCCGGGCGACGAATCGGGAGCGCGAGCAAAGGGAGAAGGACGACAG
CATACCTCGTCGTAGTCCTTCTCGGCGACCTTGGCCTGCTTGAGCGGCTTGGCCTTCCCT
CCTGCAAAACCAGCCCCGAAACCGGAAGAGAACGTCAGGACGTCCCCGGAGGACCAAATC
GGCCGGCAACGAACGCCGGCGGGATCGATCTCGCGTCGATCGGCGGGGAGGGAGGGGACA
AACCTTGCTTCGACATGGCGGACGGGCCCGGCGGGGGCGAGAAACCCTAGCTGGAGCCGC
GACGACGGTGGGGCGAGGAAGGACGGAAGGAGGGGAAAGGCGTGAGGAAATGGGCGTGGA
GGGGATGGAGAAAGGGATATATAGAGGGGTTGGTGGGAAACGGAATCTCGCCTTGTGGCC
CGGAGGGCCTGGGCCGGGTTTCCGTCGGCCCGCGGGTTTGGTGACGGGCTCTGGTCTTCC
TCGTTGAACTGTCGCCTTTGGCCCATGCTTTCCTTTAATAGGCTCCTGTTTATTTATTTT
TCATTTCTTTCTGTTATTTTGTTGATTGTTTTGCTTCTGCAAAATTGTTCGGGGTTTAGA
AAAGGTTCTGGATTTCAAATGATGGTCGGGATATCAAAGACCATGTTCAGGAGTTTGAAA
AATTGCTCTTGAATTCGAAAAATGTTTGCGAGTTTAAATGTTTTCCTTGAATTCAGAAGA
TGTTGATGGGATTTAGAAAGAATGATCATAAATTACAGAAATAGTCGCAACTTCTAAAAA
GGCTAACAAATTCAAACATAACGCTCATGATTTTGAACAAATGCCAATGGATTCCAAAAC
CTTCATGAATTTTATAAACATGTTCACAAAACTAAAAACAATATTAGTGAATTACAATAA
AAGTTCATCGACTCAAAAAATGTTAATGAGTCTATAAAGTTATTACACTCTGATTCAAAA
ATATTTTTTAGGAGTTACGAATAAATTATAACAATTTCAACAAAAAATAGAAATTCTAAT
AAATCGTTTTCGTGAATTTATAAAATTTTAGTGATTAAAAATATTGTTTTTTTTACAAAA
TGTGTGAAAATTCAAAAAATCAATTACCTAACAAAGTTGGCAAATTAAAAATAGTCATGA
TTTCAAGAAGGAAAGAATTACCTAACTCTATATATGGTTGCTAGGGTTTGAGCGGGAGAG
AGAGAGCTGCGAGGGTGCGAGAGAGTCGGTCGTGGAGGTCCTTTCCCACGGCCGGGCAAG
AGGGAAAAGGGTTTTCCTTCTTAATTCTTGCCTGATTAG