| Morex x Barke POPSEQ 2013 | Oregon Wolfe POPSEQ 2013 | Morex Genome Release 2012 |
|---|
 |
 |
No map location |
Predicted Genes from contig_48830
| Gene ID | # CDS Predicted | Max CDS Length | Probes in Cluster | FPKM by Treatment | FPKM by Replicate | Top Rice Hit |
|---|
| MLOC_64446 |
2 |
2218 bp |
MLOC_64446.1 |
Available |
Available |
LOC_Os02g47060.1, FRAME:+3, EVALUE:5e-114, 13102.m05292 protein OsWRKY66 - Superfamily of TFs having WRKY and zinc finger domains, expressed |
CDS Structure of MLOC_64446
Contig Sequence (7247 bp)
>contig_48830 7247 assembly3_WGSMorex_rbca.fasta
GGGCGTGCGGTGGTGTGGTGTGTCGCACTGTGCCGACAGGGGCGTCCCGGGGCCAGTCCG
GCCGGGAGCTGCCTCCCATCGGAGCCGGTGGCTGTCGTGGCCGCCTCCCCAGACTCTTCA
TCGGCGGGCGGGAGGCGCTCGTAGGTGGCGTTGGAGAAAGTGGCCGCGACGACCATGACG
GGCCCGGACGCGACGAGTTCCCCGATGACCGTGCCTCCCACAACCTGGCCCTGCCCACCG
GCGAGGTAGACGGCGAGACCGGTGGCTCCCGGCGGGCATGGCGACAGGAGGAAGGCACCG
GAGAGGGAGAGGATCTCGAAGCGGCCGTGGAGCGTGACGACGGAGCCGGCGAAACCGCTG
AAATTTATACCGAAAATGCCCCTGAAATTGATACCGAAAATGCCCTCGAAAAATTTGGGA
AGGAAACCGCTGCTAGTTCGAAAATTTTCCTCTCACGAAAATGCCCCTCGGGGTCAGATA
TAATACACCTGAAGTCTATGTATTGCATCGTATCTGGACCATCGAATTCACTCCGACGGA
CGGTCCATATCGCTGAGGTGTACCGTAAAACATCTCCAAAACTAAACTTCATTTTTCTTT
TAGCCCGTGTTGCAACAGGAAAGACGGGACACGTAGCACATTGCAGCGGTATTACTACTA
TCTACAACTAGTCAAGAGAATCAATTGATTTTTGTGAGACCAATGCCTTGTATTTGGAAT
CTTTCCGGGGATTAATTTTGTGAGACCAGGGTTGATCTAAATAAATACTAATACGGAGTA
GATCAGGAAGACTGAGTCCTCAAAATATAAAGACGATATGGGCGTTCTGGAAAGAGAAAG
TACTATATACACAAATCCTGTCAGTAGATAAATATTAAGAAGCACATCGCGCGCGGGCAT
CAAAAGATACGTTCAGTTCACTTGCATCCATGTGCGGTTAAATGGCCTTGACTCCGAAGT
CTCGATCGATGGAACAATGTTTCTGCTAGTCAAACTGCTCAAAATCACATGTAAAGTCCT
GCATGAAGACAATATTCTTTTTATTTACCAGAAGACTGAAGTGAGCATGATTAGCTATTC
CACCTTATTTCTTATGCATCCTAGTTATTACGTGGCATATATACTTCAAGATATGTTTTT
TAGCAGATGGATAGCACCCTGGCCTGTGCATACATCTTTTAAGATAGTTAAGTAGTACTT
CCTCTGTAAAATAATATATAACGTTTCAGAGAGTTAGCAAAAATAATTAGTTTACAGAGG
GAGTAATCAACTTTGATGTTTAAGAGAGAAACTACATACAGTACAGTAGATGATTGAAGT
ACATACATGTTCAAGCCACTATCTCTACATATACAAGCCAGAAAAAGTACAGTCCTGCCA
ACCATGCATGCGCGAATGCAGAACTACCCGTTCTCCCATTTCTTTTCTTAATTATAGGAG
CAAAGACCCCAAGGGTGCCAAGACCAAGCCTATAGATATCACTGAGAGACGGTGATCGAC
TAGGCCGGAATTTCAAGAAAGATCCCAGTAAGTACAGATCTTGTCTAGTACTATTATTTT
TGTAAGCTAGCTAGCTGCGTCTCTTCCGATCGATGGCTTTCGAATATCTTTGTTCCGGTG
GGCGTTCGATCCATTCCAGCCGAGGCCACGACTGACTGACGTGAGGAAGACACAGCCGCG
CACACGTTAGCCAGGCAGAGCTGTGGTCGATCCGCGTTTATCGAACCCGAAAATTAATTA
TTAGTGCGTGCTTTGTTTATAGACGTACGCTAAGCGCGTGTCCTGTGCGCTAAAGACGCC
TCCAGACACGGGGCCTGGTATTTCTGCGGGCACACACTGTTCAGTGCGCGAGAGATAGTT
AACATGATTTGAAGAGCATCGAGTAGAACATGTTTAAATGGCGTAGAGTACAAATTCAGC
ATGATAGGGATATTAAGGTAGATTATTAGAGTGGACTAGTCACTAGTAAATTGGTTAGTT
TGATTACGACAAGGTAGTACTCACTATAATGCCCAACAGTAGATATTCGCAAAAACAAAA
AAAAGCCCAACAGTAGATAATCCTTACCCCGCCGCGCAAACCTAGCCACTTTCTGATGCT
ATACTATGCTAATTTACACACAGTAAACCTAGCTTTCGGCTGTTGTGTCAACATGAAATA
ATAGTACTACACAAGCACACAGTATCGCAGTATAACCAGTGACTAATTTTGGTCCGTAAA
CCCTGACCAGATTTTTACCGTGCAGCCCGGCCCGCTTGTATGTACTTAAAATTACCCCGG
ACCCCTGGGCCCCTGCTGTATTTGCGTGCGGAGAACACTTTGCGCCTGAGATGAAAGAGA
AAGTCAGCGACCTGACCTCCCACCATCGTCCATGCATGTCTCTTCTCTTCTCTAGAGGGG
GAAATGAACAGTGTCCACTCCCAGTGACTGTCGGCTTCCTCTCTCCTCGCGCCCCTCAGC
TCAGTCCCTCTCCCTCTCTTCTATCGCACAGACAATTTTGTCATCTAGGCCACACATGAC
ACGCCATCTCCCACAGGCCACATCTCTCTCAACAAAAGACAGGCAGCCTGCAGTTGCACG
GCCTCTCTCTCTCTCTCCCGGAGTATCATCTGCGTCGACCTCTCTCCACAAAGCTAAGCT
AGCTGTTGAGTCTTGAGTTCGTGTGAATTGCCAAGTAGAACAGAAGCACGAGCTAGCTCT
AGGCTGTCTTGCTGCCTACTTGGTACTTCATATATACATACATACATACGCACCAGAGGG
AGGGAGGGAGAGAGAGGGGTAGTCATGTGCGACTACTACTTGCAGAGGGTGGAGGGCGAC
CAGCAGGCCGGAGACCTCACCGACATCGTCCGAGCCGGTGGGGCCATGCCGGCTGGCTCT
GCCGATCCCCCGTCCACGGCCACCGAGTGGCTGCAGCTCCCGACTGACCCGATCCTGTCC
CCGCCGCCCCAGTCGTCCTCAGACGGCGCCGGGCCGAGCGGGGCCGACGCCGACGCCTTC
GGTGACCCGTTCTCCGGCCTCCCCGACCCCTTCGGCACGGACTACCCTTCCTCTTCCGGA
AGTGCCGCCGCCGACTTCTTCGATGCCGTCCAGAACGCGATGGATGTCGGCATGGCCAAG
CAGGTTGGCTTCGTCGGCACGACCGGCTGCGGCGGCGGTGGAACAACTGCTGGTGCTGGT
GGCGGGTTCCTGGACATGAGGAATCACCATATGTTTCCAAGGGAGATGCCGATGTGCGGG
CTGTCCCCGAGGGCCATGGGGCCGTACGCGCTGATGGGCGGTGGCGCGGCGAAGCTCGGC
GTGCCGATGGCGGGGCACGGGCAGACGGCTGGCCCGTGCGCGTTCGACTCCGTCGCAGGG
CTGCAGATGTCGTCGTCCCCGCGCGGCGGTGGGATCAAGCGCAGGTTCGACACCGGCCAT
CGTTAGCTAGCTATCTGTTCAGTCAGATCTACGCAAGTGCGCCTTAATTTCTTCGATTCC
TCCCGACAGGTGTAGTTAAGCATGGAGTTCCTTGTCGTGGGGGCACTGTTCAGGACTCGT
AATTTAGGAAAGTTTGCAGCTCCATTTCCTCCTACCGTGCTTAGTTTTTCCTCATTCTGC
ACCTCCCAAGAATGTAAGGATCGAGATGCATGAAAAAAGGAAACTAAATGCATGGCTAGT
TTTGGGCTACTATGGCAAAAACAGCAATATTTTGTAGGAGTAACAAGAAAGAATAATAAT
ACTTCTGATAGAAACTTAATCTTTACACTACACCAGGATACAAGATACCTAGACTATATC
CCCCAGCTCCTTGTTATTACAGCAAACCCTAGTTTTCAGTTTCCTTTAGCTTTAGATATT
GAAGCGCATGTAGTAGTGGTTGCTCAAAATTGTTCGTGGATGCTGGATGGATAGCTAAAT
TAAGGTGGTGGTCTCGTGTTTGATGCAGGAAGAACCAGGCAAGGAAGGTGGTCTGCATCC
CAGCACCTGCAGCAGCAGTGGCCGGGAAGACCACTGGGGAGGTTGTTCCTTCTGACCTGT
GGGCTTGGAGGAAGTATGGCCAGAAGCCTATCAAAGGCTCCCCCTACCCAAGGTACGACA
TGGAGTACCCCATTAAACTCTCTCTGCTGGTCTGGTATATAGCTGCATCTCTTCCACTCA
GTCTTTCTCTAGCTCCCTTCTGCTCCATGTATGCATCAGGCCAGGGTATGTGTGCCTGTA
ATAATATGGCGATCATGTAACCATAATACCAGCATATGCTCAAACTCACATAGATTCCCC
TCCTCAACGAGAAGAGAAAACACTGAACTTCGTTTAAAAAAAAAAACTCGAACACATCTA
TCTATATATATACCTCTCTTTTCTGTAAAATTTCGATCTGTTTAGTTGCAGAAGAATATG
ATCAGCAAGATTGCATCTATTTCCAAATTGCAAGTGGGGAAGCTAATACCGCATTGAACT
GTTATGTCTTCTTTTTTGTTGGAGTTGTATTCATTACTTTGTCCTTTCAACATGACATCT
CCAGTTTAATTGTACAGTTCACAACAATGTTTATTGTGCATTCAAGTAGGCTCACACTTT
CATATATTGCTTTCTCACAACAAGGATTATGTGTTGGGCTGAACAAACAAACGGACCAAA
GGTCCAAGGCTAAATGCATGTATGGAGCTTTCCTTCATACATTCATCAACCTTTTTGCTG
CTTCAAGTTTAGTACGAAATTAGTTTGTCCTATTTAAAATTAATAATGCATGTCTAGGAA
AAAAGTTTGACCCATGCACAGTTATAAGAATATATGACCTTACTTACTACTTTGTCAAAT
TAACTCAATGTTCCATTCATCCAAAAAATATATACATAAGATAGCGAACCGTTGAATTAT
GATTAATAATATTTTAGTTGGTGGCTACATCTGGCATGATATATGCTTACATGTACGGTT
CTCTTGTAAGACGTAGGGTTCATCAACAACTGAAACTGATCAACTTTCCTAGCATTGGTT
GAAACTAATCTTTTTAAAATTAATAGATAAGAAATGATTAAGATTGGGAGGTTGGGGACA
CTCTGGCACCATGTGTGTATGCATCCAAAATTCTTAACATCCTTTTGCAACTTAATTTTT
ATTTTTTATCATGAAATTATTGCAAAACATTTTAAATTATATGATGGTTAAAATAAATTA
ATATTTAAATGACATAAGTATGTGGTATTGTTTATCAAGGAATTGACATCCCATTGCCTA
GTAAATGCATACCACAATGTCAAAATTTGCACATGCCCACCCGTCTCAAACAAAAAAAGT
TCCGCTGTTTTTATTTTCCCTCTTATTAAACTACCTCTCATCTGCCAATGCATTTTTATT
CCTATATCACTGTCATAAAAACAGAGCTATCTTTTTCACAGGGAATAAAAATCTCCGCTT
GTACCTCCATATATCTTGTTTTAGTTGGCATGTGTGATGGATGAAATGTTCTTTCAATTC
TCTAATATTTTTATGGTTTTACTTATTAACTTAGGAATATATGTGTGTGTGTTAGTTGCA
TCCATGATGTTTTGTGGAAAGATTGAAACACTTTATGATGCACTTCAGCAAATGGGGACA
CCAGTGTGCCCCTGGTCATCAAACAATTCCCAGTGATGTAACTAGGGTGTGGTAGTACAT
ATCATATGCTCTGGAATCCACAATAGATTTCTGACGAAACTTTTTACCATGCATTGCATG
TCCAGAGGGTACTACAGATGCAGTAGCTCCAAGGGATGCCCTGCACGGAAGCAAGTGGAG
CGCAGCCGGACGGACCCCAACATGCTGGTCATCACCTACACATCGGAGCACAACCACCCG
TGGCCAACGCAGCGCAACGTGCTCGCCGGCTCCACGCGGTCCCACTACGCCAAGAACAGC
AGCAACACAGCTGCAGCTTCGTCCAAGAACAGCAAGAACTCTTCGCGCACCCAGCACAAG
CCAGTCGTCAAGGCAGAATCAAAGGATCTATCCGCCACCACCCAGGCCGTCACGAGCACG
ACCACCACGGCGACCACGAGCACCGGCAACAATACATCACCGATGCCTGTGAAAGAAGAG
GCAGAAATGGAGAGAAGGATAGGCGGTGAAACTCCAGCAACGGTGGGTTATTACAGTGAC
CATCTCCTGCAGCAGATGTTCAGCCAGAGTTACAGGCCGATGACGCCTGAGGAGGCCGGC
GGCTACCATCACCAAGACGACTTCTTCGCCGACCTCACAGAGCTGGACTCGGACCCCGTC
AGCCTCATCTTCTCCGCGGAGTACATGGAGGCCAGACCTGACAAGGAGAAGGCAGCAGCC
ATGGACGGCGTCGATTCCTTATTCATGACGGACTGGGCGCCTGCTAGTGCTGCTGCTGTT
ACTACTTCTGCAGGGAGCTCATTTGAGCAAGGGGGCATAGGTTTTTGAGTTTTGACATCA
GTTAGTTACCTTAAAACATACCAGCAGGCTTGGACAATCGATGCATGTGTAAGTGCAAAC
ACCACATTTGAGGACATCTCTAGCTAGATACAGGCTTGAAATAACCTTGATGATGACAAT
AGCAAAAGAAGAAGAAGAAAAGAACATATGGGGTTTCTCTCTTAAACTCCTCTTCCAGGA
GCCCGGTCCGTGCTCCTTCCTGATGTTATCGAGAGTATGGTTTTGTTCAAGATGATATGG
ATATGTATTACGCCCTCCAATCCAAAATAAGTGTCGTGATTTTACTTTAAATCAGAGATC
GTACTATTTTTTAGGAAAATTCGCACGAGGTAATATAAGACAAACAGTCTTTCAGAAAGG
ACATAATATCGAGCCGGGCATGAAGGTTTTCCCAATAGAGTTTTACATGGACGCGGAGTT
TTGGCTCCAGGAAACATGAACATTCACTACGGGAAAATCCTGTTTTCCCATGTGTTAAGC
TATAAGCCGTGAGCTATTTTTCAGGGATTCGGCCTATGTTTATATAAGCCGAGTGCTGCC
GTAAAAACACCCGACAAATAAACAGCTTTCGGTTTATAGCATCATCTAAGCCGAGTGGTT
CCGAAATGCCCTCGGCTTACATGGCGCACACGCCTTATGCGCGAAAAGGTTGTCGGCGTT
CTGATAATGGGGTATCCATACCTGCCTGCGTGTGGTCCAGGATTGACCCACTTCATCAAG
CAAGCACAATCGGGCACGACACCATTCAAGGCAAGGTCCTCGTGAGGGGCCAAGCCTCGC
GAAGGGGGAGCAACATCAAGACCCGCAGGGGGCCTTGCCAGGATCCC
