morexGenes - Barley RNA-seq Database

Contig contig_48772
Source Contig contig_48772
Contig Data
|Contig Location|
|Microarray Probes|
|Predicted Genes|
|CDS Structure|
|DNA Sequence|
morexGenes
Links
Map Locations of contig_48772 (7544 bp)

Morex x Barke POPSEQ 2013	Oregon Wolfe POPSEQ 2013	Morex Genome Release 2012
	No map location
Predicted Genes from contig_48772

Gene ID	# CDS Predicted	Max CDS Length	Probes in Cluster	FPKM by Treatment	FPKM by Replicate	Top Rice Hit
MLOC_64400	3	4478 bp	MLOC_64400.1	Available	Available	LOC_Os04g38570.1, FRAME:+3, EVALUE:0.0, 13104.m03704 protein multidrug resistance protein, putative, expressed
CDS Structure of MLOC_64400

Contig Sequence (7544 bp)

>contig_48772 7544 assembly3_WGSMorex_rbca.fasta
CCCCACAACCAGCAACTACCAGCGCCCTTGTTGTCACAACGAGGCGCCGTCGAGCCACCG
CCGCCTACAACCACAACCAAACGACGGCAACTACCGGCTTGTGCCGCCCTCAACCCGCAC
TAGTGGGCCGAGCGCCAAATATTTTAGTTGTGTTTTGAAATTACATTTGAAAACATTACT
AAAACTGCGATTATTAATTTGGATCGGAGGGAGTAAATATTATAACATGACTTACACAAA
TTGTTCCTACATCCGTAATCCCTTTTCAAAATTTCTTGATAAAACTTCAAAAACAGGGTA
ACCAAGCTTCTGTAAATGCCAAGGCGTATTTGTAGCCCTGTCCTACCGTGTCATCGCCCT
GTCCTATATGCTCGCATTTGATTTCCCCCTCCCCCGAAAAGCGCGATTTTTTTCAAGCAT
ACCCCAGCACCCAACCCAAGCCCCCAAAAATTAGCACACTGCAACAGCCCTGCTCGCTTT
GCAGTATAAGAGAACAGAGTGAGGACCGCCGGGAGCAAGAGCAGGAGCAGGGGGGAGGGG
CTCTAGTGCTAAACATTTCGGCGTGTTTAGATCCAATGCCAGAGCGGTGAGGCGCTCTTC
TGGTTGCGGAGCTCGCGGCGGAGAGAGACAGAAGAGTGACAATGGCGGAGGAGACAGGGA
AGGCGGAGTCGTCGGCCGGGGCCGGGAGCTGCGGCGGCGGCGGCGGTGGCGGGTGCGAGG
CGGTGAAGAAGAGGGCGGAGCAGAGTGTGGCGTTCCATGAGCTGTTCAGCTTCGCCGACC
CGCTCGACTGGCTGCTCATGGCGGCTGGGAGCGCCGGCGCCGTCGTGCACGGCGCCGCCA
TGCCGGTGTTCTTCCTCCTGTTCGGCGAGCTGGTCAACGGCTTCGGCAAGAACCAGCACC
ACCTCCGCCGCATGACCGACGAGGTGTCCAAGGCACGTATTTCCGGAAAATCTCTCGTCC
TTCCTCTCCGCGGTTGCCGTTTCTATGCACGCTCTAGTCGCTGACGCTCAATCTGACTTG
CTTCACTCTGCGCGCTGCAGTACTCGCTCTACTTCGTCTACCTCGGCCTCGTCGTCTGCG
CATCCTCATACCTGGGTGAGTTCACGCCCTGCTCCGCTCACGCCTCTGCGCGCATTCTTG
CCGGTGTTGCGTTCTAACTGTGCGCGCGCTCACGTCTGCTCTGTGTGTCCGTGCAGAGAT
CGCGTGCTGGATGTACACGGGCGAGCGCCAGGTGGGTGCGCTCCGGCGGCGGTACCTGGA
GGCCGTGCTGCGGCAGGACGTGGGCTTCTTCGACACCGACGCGCGCACCGGCGACGTCGT
CTTCAGTGTCTCCACGGACACGCTCCTCGTCCAGGACGCCATCGGAGAGAAGGTGAGAAC
CTAACTGGCAACGCTCTGGTGCACCGCAGGCATATAGCTCCGGTCACCGCGTGTGACTGA
CGACGGACACATGTCTACGCAGGTCGGCAACTTCATCCACTACCTGGCGACGTTCCTGGC
AGGGCTCGTCGTCGGGTTCGTCTCGGCCTGGCGGCTGGCGCTGCTCAGCATCGCCGTCAT
CCCGGGCATCGCGTTCGCCGGCGGGCTCTACGCGTACACCCTCACCGGGCTCACCTCCAA
GAGCCGGGAGTCGTACGCCAACGCCGGAATCATAGCCGAGCAGGTAGTAACTCTCAACCA
CGTACTATTTCTGCAGCGCCATTATCATCTCACAGGGATACTAAAGCTGGCCGGGTGGGG
AAGAAGAAAGCTGCAGGCTCTAGCTCGGACCGCTTGGTCAAAGAGTCAAATGTGGATGCA
CATGCCCTGAGAATGATTTGATTTTGGATTTCCGCCGGTTTCTTGGTAGATCCAATCGGC
CTTTTTCCAATGGATGATTTCTTGTTTCATGTCCTTTCTTGCCCTTTTCTTGAGACATCT
GCTGTCAAATGTCAATCATGCTGTACTTCTTTTTACCCAATGCCATAGCTTCCCCCGATT
TTGATTGATGTAAATAAGCGACTGTAAACGATGAAATGTTCATCTGCTGTGCAGGCGATT
GCCCAGGTGAGGACGGTCTACTCCTACGTGGGGGAGACAAAGGCCCTGAATTCCTACTCG
GAGGCGATTCAGAGCACCCTGAAGCTGGGGTACAAGGCCGGGATGGCCAAGGGGCTCGGC
ATTGGGTGCACCTATGGGATTGCCTGCATGTCATGGGCGCTGGTGTTCTGGTACGCCGGC
GTGTTCATCCGGAGCGGCCAGACGGACGGTGGAAAGGCGTTCACGGCCATCTTCTCTGCA
ATCGTCGGCGGCCTGTAAGTCATGACTTTGGACAATTCTCACAGTTCTGCAGCTTGCTTT
CAGCGAGAAAAATTTACCCAAATTCGTGAACTGCAGGAGCCTTGGACAGTCCTTCTCGAA
CCTTGGTGCGTTCAGCAAAGGGAAGATTGCCGGTTACAAGCTGTTGGAGGTGATAAGGCA
GAGGCCGACAATAGTCCAAGACTCAACTGATGGGAGGTGCCTGGATGAAGTCCATGGCAA
CATTGAGTTCAAGGAGGTGTCCTTCAGCTATCCGTCCCGCCCGGACGTCATGGTGTTTCG
TGACTTCTCGCTCTTCTTTCCCGCCGGGAAAATGGCAGCTGTGGTCGGAGGCAGCGGTTC
TGGGAAGAGCACCGTTGTGTCTCTGATAGAACGGTTTTACGATCCTAATCAGGGTAAGCA
CATGAATTGCACGCCTAAATGACTATGTAAGTCGGCTTTACTTAACTGATGAGTGTGATT
GTTGTTGCAGGACAAGTTTTGCTTGATAATGCGGACATCAAGTCGCTTCAATTGAAATGG
CTGAGAGATCAGATTGGTTTGGTGAATCAAGAACCAGCCCTCTTCGCCACCACCATCATT
GACAATATTCTTTATGGCAAGCCTGACGCCACAATGGCTGAGGTTGAGGCCGCGGCTTCG
GCTGCCAATGCACATAGCTTCATTGCTCTTCTTCCTAATGGGTACAACACTCAGGTGGGT
TGCACTTCTGGCTCAATTGCAGTCTTATTGTTTACAACCTGTATTTTGTGATTTGATCCG
ACTAGAGTGAATTCTTAGTTCATACTTCTGTCCATGCTACTTGAATTTCAAATCATGTAT
GCATTTTATAGTGTCCATGGTATTTTTACCTTGCAAAAACTTGTTGAATCCAATGATAAA
TCAACTTTATCAACAGGTGGGAGAACGGGGACTTCAGCTGTCTGGTGGCCAGAAGCAACG
AATTGCCATTGCCCGTGCAATGCTGAAGAACCCAAAGATCCTTCTCCTTGACGAGGCAAC
TAGTGCTCTTGATGCTGGTTCAGAGAGTATCGTTCAAGAAGCACTCGACCGCATAATGAT
CGGTAGGACAACTGTGGTGGTTGCACACAGGCTCTCAACCATACGGAGTGTTGACATGAT
CGCGGTGATCCAGCAAGGGCAGGTTGTTGAGACCGGTACTCATGACGAGCTCCTTGCCAA
AGGCAGTTCTGGTGCTTATGCAGCTCTCATCAGATTCCAGGAGATGGCCAAAAACCGCGA
CTTCCGTGGGGCATCTACCCGCAAGAACCGGTCATCTCGCCTGAGTAATTCCCTGTCAAC
TCGGTCACTGAGCCTCAGGTCGGGAAGCTTGAGGAACTTGAGCTACTCATATAGCACCGG
TGCGGATGGCCGCATTGAGATGGTCTCAAACGCCGACAATGACCGTAAGTACCCGGCGCC
AAAAGGATACTTTTTCAAGCTTCTCAAGCTAAATGCTCCGGAATGGCCTTATACGGTGCT
GGGGGCGATCGGATCCATCATGTCTGGCTTCATTGGCCCGACATTTGCCATCGTGATGAG
CAACATGATTGAAGTGTTCTATTTCCGGGACCCCAACGCGATGGAGCGCAAGACTAGGGA
GTATGTGTTCATCTACATCGGAACCGGGTTCTACGCGGTTGTCGCCTACCTGATCCAGCA
CTACTTCTTCAGCATCATGGGCGAAAACCTGACCACCAGGGTGCGGAGGATGATGCTTGC
AGGTATGGTGACCGAATTCGCAGGCTTGTTCCTAGAACTTGTATTCTTTTCCATGACCTC
TGCAGAGAGAGAACTGGCATTGCTTTATCTAAGGCACCACCTATAACCACTGCATCTGCA
TGCAGTTATCTTGAGGAACGACGTGGGGTGGTTCGACGAGGAGGAGAACAACTCGAGCCT
GGTGGCGGCACGGCTCAACACGGAGGCCGCGGACGTGAAGTCGGCGATAGCGGAGCGGAT
ATCGGTCATCCTGCAGAACATGACATCGCTCCTGGTGTCCTTCATCGTCGGCTTCATCAT
CGAATGGCGCGTCGCCATCCTGATCCTCGTCACCTTCCCTCTCCTTGTCCTCGCCAACTT
TGCCCAGGTAAAAATCCAATGAACTTACTCTCGCACTAAGGCTTCGTTGGGTTGCATATA
AGGGCTGGCTAGCCGAGTAGTTCTTGACAGTAAAGCAAGTTCATTCGGGTGTCACGCCGT
TTTGGGCGCAAGCAGCCGTTGCAGGGCCGGCAGCTGAGTAAGTTGGAGACGGATAGTACA
ATTGAATTCTCCGGCATGGTACGCGATGGTAGCTAGGATTCGTGTTCCATGCCGTTGCCA
CTGCGTCTGCCATAAATTACTGTGCGCAGGAGGCATGTGCCGGAGCTCGTTCCCCGCTCC
CTGATCCCTTGTTTAATTCCGGCCAGATGCTTCCCACTCTCTGGCCCGTGTGTCATCTAC
AGCACCCGCCGTAAACAACTCCCTGAAACCTCCGGACCACCCTTACGTTACGTTAGGCTC
TAGGCCCCGCCGTGTTTCTTCAATTGTGGATGGGATGAGATGGTCGTGTTTGGGCATAGC
CCTGTTGCTCGTTGGGCGCCCGCCATGGTCCCGGTGACGCTGTCGGTTGCGGGCTTGCAC
GGCCGCCTCGTGCAAGGGAATCTGGGGCCTTGCTCCAGGCCGCTCGCAGTGGCGCACATG
GCGGTCTTTGCAGGCCCTGACGCCGTGCTCTGGTGCCGCCCCGGAACCAGAGCGCCGTGC
CGGCCTTTTTGTTCTCGCTGCGGCATCATTTGCTTTGCTCGCGCGCAATAATTTCCTACT
GCGATTCGTAAAGATTGCATGATGCCATGCTGGTGCCTGCGCGTGCATGAAGCCTGTCAG
TCACCACGTGCCCAGCCGCAGCTCTTGCATGCACAAACGGATAGCATCGCTCATCACTCA
TTACTCATCACTAGCAGTAGCAGTAACGTTATTAACTCATTATTATGCATGTGTTCATTC
TTCTGCGTACTGTCAATTCAATGACGATCGATGATCTCTCTGTGTGTGTGTGTGTTTTGG
CAGCAACTGTCCATGAAGGGGTTCGCCGGGGACACGGCCAAGGCGCACGCCAAGACGAGC
ATGATCGCCGGGGAGGGCGTCAGCAACATCCGCACGGTGGCGGCCTTCAACGCGCAGGAC
AAGATCCTCTCGCTCTTCTGCAGCGAGCTGCGCGTGCCCCAGATGCACAGCCTGCGCCGG
AGCCAGGTCTCCGGCGTGCTCTACGGCCTCTCGCAGCTCTCCCTCTACGCCTCCGAGGCG
CTCATCCTCTGGTACGGCGCCCACCTCGTCCGCCACCACGTCTCCACCTTCTCCAGGGTC
ATCAAGGTCTTCGTCGTGCTCGTCATCACCGCCAACTCCGTGGCCGAGACCGTCAGCCTC
GCGCCCGAGATCATCCGCGGCGGCGAGTCCGTCCGCTCCGTCTTCGCCGTCCTCAACAGC
AGGACGCGCATCGACCCGGACGAGCCGGAGGGCGAGCCGGTGGAAAAGGTTCGCGGCGAG
ATCGAGCTCCGCCACGTCGACTTCGCCTACCCGTCGCGCCCGGACGTGATGGTCTTCAAG
GAGTTCAGCCTGAGGATCCGAGCCGGCCAGAGCCAGGCGCTCGTGGGGGCGAGCGGGTCG
GGGAAGAGCACTGTCATCGCTCTCATCGAGCGTTTCTATGATCCCATGGCCGGCAAGGTC
ATGATCGACGGCAAGGACATCCGTCGGCTCAACTTGAAGTCGCTGCGTCTCAAGATCGGC
CTGGTGCAGCAGGAGCCCGTCCTGTTCGCCACCAGCATCCTCGAGAACATCGGCTACGGC
AAGGACGGCGTGACGGAGGAGGAGGTCGTCGAGGCGGCCAAGGTGGCCAACGTGCACGGC
TTCGTCAGCGCGCTCCCAGACGGGTACAGGACGCCCGTGGGCGAGCGCGGCGTGCAGCTC
TCCGGCGGCCAGAAGCAGCGCATCGCCATCGCGCGCGCGGTGCTCAAGGACCCGGCCATC
CTCCTGCTGGACGAGGCGACGAGCGCCCTGGACGCCGAGTCAGAGTGCGTGGTCCAGGAG
GCGCTGGGGCGCATCATGAAGGGCCGGACGACCGTGCTGGTCGCGCACCGGCTGTCGACC
ATCCGGTGCGTGGACTCCATCGCCGTGGTGCAGGACGGGCGCGTCGTGGAGCAGGGCAGC
CACGGCGACCTCGTGTCGCGGCCGGACGGCGCCTACTCGAGGCTGCTGCAGCTGCAGCTG
CACCATGGGTGATGATGGATGGATGGATGGGATGGATTGGCGTCCTGCTCCGGCATGGCG
GCTGTAGATACAGAGTAGACCGAGGCGAGCTTTGATCGACACTCCGATGAGCAACAGAGA
TTTGCTGCCCAGATGGTGATAGGTGTTAGGCCGGAACTAGTGTTTTATTTTCTCTGTAAC
CGATCAGGATTATGCTGAAGGCCATGTTACATTTTGTTCCAACTTGTACTGATGTCCGGC
TTCGGCACAATTTCTTTTCCCCGACGGAATTTGTCCTTCTCCTCGTTATCTGTTTCAAAT
AGATGGGAAACACGAGCGGAGGTTCAGATACCGAAGCACGAGATTCGTCTTCTTCGCAAC
CAAAATAAGATAAGATTCGAACATAGAAACCATGAAGTCGCGAAAATGAACTAACAACTA
CCAGCATCCATGACATATCGCACCCAAGATGATTCAACGAGCACCAGCGGGACGACTGAC
AAACATATCGGCCAAGATTCAAGATGTGATCTTCACTCTCAGTATATACTCCATTTTCTT
CCGAAACTCCAAGTGGACGAATAGATGAGTGGGGAAAAATGGAGGTGGGTATACGTATGA
CTGTCTGTATACACCCCCCTCGTCGCGCACACACAAAACGCATAAAGGAGAACGTATACC
CATCTTATATTATACACTACAAGCCGTCGTACATATGCAATACGAGGTGGTTATACGTAT
GATTGTCTGTAGTGTATAATAGTGTATAATATGAGGTGGGTATACGTTTCCCCTTTTACA
TTGTGTTGTGTGTGTGTGTGTGGGGGGGGTACCGAAGCAAAAGAAGCACATATGGTGGCT
ATCTTACAAAGAACAGAAATAAAATGTGATGGTCCACGTAAGACGGTCGAAGACTAGATT
CATCACTAAGTGATCCTGAACACCTACTTACGTCATTCATAACCTCATCATGTTCTCGAT
CAGAGAAGGAGCTCTGGACGAAACAGTCATGATTACGCACACAG