| Morex x Barke POPSEQ 2013 | Oregon Wolfe POPSEQ 2013 | Morex Genome Release 2012 |
|---|
| No map location |  |
 |
Predicted Genes from contig_48722
| Gene ID | # CDS Predicted | Max CDS Length | Probes in Cluster | FPKM by Treatment | FPKM by Replicate | Top Rice Hit |
|---|
| MLOC_64395 |
3 |
2219 bp |
MLOC_64395.3 |
Available |
Available |
LOC_Os04g45470.1, FRAME:-3, EVALUE:0.0, 13104.m04561 protein vacuolar-processing enzyme precursor, putative, expressed |
| MLOC_64367 |
1 |
3530 bp |
MLOC_64367.1 |
Available |
Available |
LOC_Os06g18930.1, FRAME:-1, EVALUE:3e-91, 13106.m02020 protein cadmium tolerance factor, putative |
| MLOC_64374 |
4 |
4395 bp |
MLOC_64374.3 |
Available |
Available |
LOC_Os08g35440.1, FRAME:+1, EVALUE:4e-92, 13108.m03717 protein Ser/Thr protein phosphatase family protein, putative, expressed |
CDS Structure of MLOC_64395
CDS Structure of MLOC_64367
CDS Structure of MLOC_64374
Contig Sequence (6972 bp)
>contig_48722 6972 assembly3_WGSMorex_rbca.fasta
CATTGCAATAAAGTGTGTATTACCTTGAAAAGGAAATTCAAGGTAATAATCTCAAAACAA
TTTCCAAATAAAGTGTGTAAGCAAAAAAGAAATAATTAATAAGACTGGCACCGTATTGCG
ACAGGCTGATCATGCATGGTCATTGCTTCATCCAAAATATTTCAACACCTTTGCTTTCTT
TCCAGAAAAGAATTTCCACACCTTGAGCTCTTTGGCCTTGGCCAGCAGGGCTAACGACAC
CAGGACGTAGATAGTGATGAAGACGACCACCAGGGCGACAAGTGCGATGACGTACGCGGA
GGTCTCCCAATCCCTGCAACTGCCGGCGGCGTAGGCACCCAGCAGGCCGAAAAGGTCCAG
CACCACGGCTGTCTGCATCGCCCACAGTGGCGCGCTGTGCTTCTTCTCCTTCACGGTGTG
CTGCAGCACCAGCAGGATGACGACGATGGAGGCCACGAACGACGTCGCGTTGCAGTAGTA
GAAGGCCTGGTACCGTTCCGGGTTGGTGTTGAGCAGGATTGGGTTGCCGGCATGAGGGAG
GTAAGCCCCCGACGGTGATGGAGGCAACAACTGGGACTGTGATGGCGACGGCGACGGCAC
ATCGTCGTCGCCCCACGTGCCCCCGGGGGGCGCCAGTCCGGCCTGGTACGTCACACTGGC
TGCGAGGATGCCGAGCAACATCAGGGACTTACGTTTCGTGTAGTTCTTCCGGCGTCGTCG
TTGTTGTTGTTGCAGCCGCTCGGAGCCGGAGGCCAAGACCTCTGTGTCTTCATCCTCGTC
GGCCGACCTCATCGGCGCTGATGACAGCGGCTTGAGCAGCGTCTGCAGCCACTGCGGAAC
CCATGGTTGCTGTGACAAATTGCGGCGGTTTGCATACACGTAGAAGAGGATCTCCAGGAC
CAGGAATGCCACAACGGCTGCCACGAGCGCGAAGACATAGATGGAGGTGCGCAGCAGCCG
GCAGCTACCTGCGGCGTAGGCACCCATGAGGCCCAACAACCCCATCATGATGCAGACGTG
GAGCGCTTTGCTCCGAATGCCCGACTTGGACAGGGTCTGGTTCATCAGGAGCAGAATGAC
GGTGACGGACGCCATGAACCCCGTTGCATTGCAGTAGAAGAAGACCTGGTACCTCACTCC
ATAGTGGTCGAGGAGGATTGGGTCTCCGGGAGTAACCAACTTGTCCCCGTTGTTCTCCGT
CCAGAACCCTCCCGGCGGGTTGAGCCCGGTCTGGTACGTGACGGTGGCGGCCAGGATGGC
GAGCTGCAGCAAGAACTTGCGCTTCCTCTCGAAGTTTTTCTTTTCTTCAACAAGAATCCG
CTTCCTCTCGGACTCGGAGCTTGGCTGGTTCTGGTGCTGGTCGTAGGGAAGGATGCCAGA
TGGACTACCCTGAGCTTCTTGCTGGGGCGTCTTGTCGGAGGTGAGATGGAGAAATCGTGC
AAGCTTATCACACATGCTTTGCGCCCACCGTGCCAGCCAGCTGCTTTCCATGCCTTGGCC
GCGATTGTGGCCGGAAGCACCAGGAACTTTGCTTCCGGCCACATCTTGATGTCGTTGTGG
TTGTGCTTCTTCTCCTCCCTTACCGGAGGACTCGCCGCGAAGGTGGCCAACACCAGCAGC
CGGAACTTGCTCCCATCCTTGAGCTTCTCCTTGTTGCCGGTGCTGGGACGACGACGCAGC
GTCAGATGTAAGGTGGAGCAACCGTGCAAGCTTATCGCGCGCACCTCGTGCCTTCCGCGT
AGCCCAGCTGTGCTTGCCCTGAGCTGTGTACGCCATGACCTTGGCGACGGCGTAGGCGAA
GACGGCGACGGCGAGGGCAGAGACGTAGATGGTGGTGGTGTTGTCCCGGCAGCTCCCAGC
GACGTAGGCGCCCATGAGGCCGAACAGGTCCAGTATCATGGCAGTCTTGAGCGCGGCACG
CCCGACGGCGGTCAACTGCTTGCTCTGGACGATGATGATGACCACCACCGACGCCACGAA
CGCCGCCGTGTTGCAGTGGTAAAACGCCAGGTACCTCTTGCGGTGCATGATGTGAAGAAC
CGGATCGCCTGCCGTGCGCGGCGGATCCCCTGCCGGCCAGACTCCGCCGGGAGGGCTCAG
GCCGGCCTGGTAGGTCACCGTCGCCGCCAGCGTGGCCAGCAGCAGCACAAGCGACCGCGA
CTCCTCCACCTTGTCTTCCTGCCCATTGTCATTGTTGATTCTACTTGCAACATCTTTTTG
CGGTGCATTAGCATTGCCCGGCTGCGTGTCCGATAGAGTCGCCGGCTTACTTTCTTTCCT
ATACGTATGCAAGCGACAATAATTAGCTCACATCATTAATAAAGGTGTGGTTAGATCTCA
ATCAACTCAGACTTCACCAAATCTTATTCAGATGAAATAACATGCAAAACGAAAAAATAT
TAAAAAGTATTTTTTGCATGAATTTACAGGTAATATTTCACAAATATAGCATATCTACTA
AGATTTAGCAGACCCGAACTCTCACCCCGTTACTATTTTTTACTATAGACTACATACGAA
AGGAAATAAATAAATCTATATTCTAAAATATGTCTATATACATCCTATGTATTCCCTCTG
TAAATTAATATAAAAGCATTTAGAACACTACTTTAGTAATNNNNNNNNNNNNNTATTAGT
TTACAGAGGGAGTAGTTCATAGTGAAATAATTACAAGGTCTTATATTTTAAAATGGGGAA
AGGCTAATATAAAGTTATATTAAGCTTAAGACAGTTATTTTGAAACGTAGGAAGTACTAA
ACTTGAGACATTTATTTTAAGACGGATGGAGCAATAGTTATGTAAAAATGCTGACGGGCG
AGGGAGAGTGTGTGTGTGAATTACGTACGGGTCCTGAAGGTTGGCGCAGGTCAGTAGGCG
GCAGATGGCTTGCCCCCATTGCTTGAATGTGCCCATGGTGTACCCTGCGATGACCACCTG
GAGCACGATGTACAGGAACACCACGCCGACGAGGCAGACGATGTACACGGTGGTGGTGAG
CCACCTGCAGCTCCCGGCGGCGTAGGCGGCCATGAGGCCCAGCAGCTCCACCAGAACGCA
GACCAGCAGCGCGTTCGATCGTGCGAGGCGGCCGCTCAGCGTCCGGCTCATGAGCAGCAT
GATGATGGCGAGGGAGGCGACGAAGGAGTTGGCGTTGGCGTAGAAGAATGCGTGGTAGCG
GATCTTGTAGCGCCCGTCGTGCAGCAGCGGGGCGCCGGCGCGGTGCTCGTCCCTGTTCTT
GCTCCAGAAACCACCCGGCGGCGTCAGCCCCGCGGCGTACGTCAGCGGCGTCGCGAAGGT
GGCGAGCAGCAGCAGGAACTTGCGCCGCTCCTTGACGTACTTGTCCTCCTCGGCGTCCGC
GCCCGCCGCCGGCGCTTTCCTCCTGAACAGCACCAGACAGGAAGTTTCGCCGCAGGCGAA
AAGCCCTAGACACGAACGGGAGGAGGCGGAGGCCACGACGAGGTGGAGGGCGACGTAGGC
GAAGACGACGACGAAGAGCGCGGAGACGTAGATGGACCCTGAAATGCTGCGGCAGCTCCC
CGCGGCGAAGGCGGCCATGAGGGCGAGTAGGTCGAGCAGCATGGCGGAGCGGAGCACGGT
GAGCCCGACGCGGTTGCCGCTGATGCGCCGGTCCAGCAGGAACATGATGGTGACCAGGGA
CGCGACGAAGGCGGCGGCGTTGCAGTAGAAGAAGGCGGTGTAGCGGCGGGAGTAGGTCGA
CACCAGCACGGGATCGCCGACGCGGAACGGGTAGACCGCCGGCGCCGGCGCCGCGGGAAG
GAGCGGCGCCGGCGGCTCAACGCGGTGTTGTCGGGCGTTGCTGCTGCTGCCTCCCTTCTG
GTCGTCGGACCACACGCCACCCGGCGGGTTGAGGCCGGCGCCGTAGGTGACGCTGGCGAC
CAGCGTGGCGAGCAGCAGCAGGTACTTGCGCCACTTCCAGAGGAACTCGATGTCCTCTGT
CGGCTCCATCGCCATGATTCCCGGTCGATCGGGAGCAGTATACCTCACCCCTGCCCACAA
TCGGAGCAGCATATATACACGTAGGAGTACTCCTATTATATAGTGATCCGGTCCAGTCCG
GCCCGCCGTCTCCAGGACAGGACGAAGAAGAAGAATAATGCCCATGGAGTGCCCGTAGGC
GTCTTCTTTTGGAAACGAATATCACTGAAAGGCACACACACGTTGCTTACACATCTCGTA
GCTAATAATATATCCATTGCTGAGTATTCCATCCCCATGGATACCTCCCTCCCTCCCTCT
GTGCAAAGAATGTGATGCTCACTCAGACGAAGCTCTCTCTTTGATTGGCCCCCGGTCCTT
GTACCTAACTTGTTTCTCTCTTTCTTTTTCCATTGGCATCACACTCATGACAGCAACCGA
GGAACGAGCCGGGATGACTGCACGCGACGCACTGTCGTCCTGGTCAAGGCCAAGACATAT
TGTCTTGCCAGGCCAGCAAGTAGCAAGTGAGACCACACCGGATGACTTCGATTTCGAGAC
AATAGCCAAAATATCACTATGGATCCTTGCACGGGTGTCTCTCAAACCATCAAGACCTAT
TGGCAAAGAATTGAAGATCAGTACTTTCAATTGATGGCCAAGTATCCTAGCAGGATAGGG
CGGACCTTTCGGTCACTCCAAGGTCGTTGGAACGTGATCAAGCCGACTTGTAGCCGCTGG
GCAGCTTGCTTGGAACAAGTTCACAATGCTCCTCCAAGTGGAACTGTCAAATCCGACTAT
GTGAGTTGATTGCAATCAAATGGTTCTATTAGTTTACATAATGTACAATGGTTTCATTAG
TTTGATGTTTTTATTGTGTAGGAAAAAATTGTCCAACAACGGTACAAAGACATGGATGCT
TCCGAACGAAGATTTTTTAAACTAGAGTATTGTTCGGAATTGCTCAAAAACTGCGATAAA
TGGGTGTTGATTTACAGAGAATCCCCACCGAAGAGAGATTCACTTACGGAAATGGATGAA
GATGACGATGATGATGGCCCGAAAAACTTGAACAAGCCCGACGGTGACAAAAAAGACTAA
GGAGAAGATCAAAAGGGAACGGGAAGCATCGACCTTGCGGGACAAGATAGATTACATGTT
GCAATCAAACGAGTTATTGCTAGTGAAGTCTTTGAATGCAAAGATAGAGTTGGCCGAGAA
GAAGGCACGAGAGAAGCAAGAGAGGTGGAAATTGTTCAAGGAAGTTGAGGAGCGAAAAGC
ACGTGCCGCTGAGAACAAAACCATGGCCAACCTTCTTGCCGAAGAGAACATGATCATGAA
TTTGAACCGCAATGACATGAACGACATCAGCAAAGAATGGCATGATATGACAAGGAGAGA
AATCTTGAANNGGAGGATGCTTGCGTGTTACAATGGTCGCGATGGTTTCTCCTCGGGAAT
CGGAACCGATGATTTCGGTGCCGGAGTAGGGACAAGTGCCGGCGTAGGAACAAGTGCAGG
CGATGGATTCGGGGGAGACGGCGGATTCGGGGGCGGCAGTGAACTCGATGATGCAGACTG
AAGAACGAGGATGGATGAAGTCCTTTTGCGTTCGTCCTTCAAACTATGCTCTCGTTTCAC
GCCCAAACTATGCTTTATTCTTTAAATTCGAATTCATTTGCCGGAATCAATGTCAAATTC
CAACTATGCTTTATTGCGTGATTTTTCGGTTTGCGGCTCGATGCAGTGGCGCCCAAACAA
CCCCCGCATTGACGACCAATATATTAGCATCTTCTGCGAATATGCTTCCATATGGGTCCC
TTCTGAAGGTCTACCTCTGTCCACACACGCACCGACCCGTAAAATCCGTTTTTCACGAAA
TGTACACGGCTTTTGCGGATCGGCATTATACGAGATCTCCTAGAGATGCTCTAATATGTG
GTCTGCCTACCAAACGTTGGACACAGTTTCATAAAGCGCTGGATTCGGAAGCTATGACTT
TTCTGCCGAACCAAACGCGTCGTCAATGTCTTGGAGAGTTGTAACTTGTATCACTGATGA
TGAACATAAGTCACAAGAGAAAAAGGAAGAACTGAGAAGGAGATTAACAAACGTAGTTGT
ACATAAGTTACATAAATTTGCATCTCTTCTCACCATGTTCCCAGTCTGCAATATGTTGTC
CTGCTGTCCAACTTGAACTCACAGAGAAAGTCAGGGGCCCACCAGGAATCATCCAGAAAT
CCGACGGCCCGACGGACATCCCCTCAGGTGAGGATGTAAACGACGGTCTGGCTCGCCGCC
CGAGGCCAAACCCGATTACTTAAGCCGGTTGACGTTCCCTAACCCTAGCCCATCCACCTC
CTCCCTCTCCGTGCCACCAGCCTGAGCCCATCCACCTCCTCTCTCCTGCTCCGACGCTCT
CTTCCAATGCTCTCCGGCTTCACCATGGTTCTGCTATGCTCACGTCGACGCGCCGGTATC
AGATCGAGCAAGGGATCCAAACGAGGCGTGCCTCCCGCATCGCTGTCGGACTGCCTCCGG
ACTCGCGAGAGATGAACGGGGAGGAGGAGGAGGGAGAGGAGCAGCAGCCGGCTACGATGG
AGTCGGCGGATCCGAAGGACAACAAGGAGGTGGAGTAGCCGGAGCATGAGAGTTGCCACC
ATCTTCGGGCTTTAACATGGAGCATGAGGAGGCAGAGTTCGCCGTCACCCAAACGGATGA
GATGACGGAGCAGCAGGTCATCCTGGAGTCCATCCAGGATGATGCCTATATGAAGGCTAA
CCCACGCTTTAGCCGGCAAGAGCAAGAGACGACTGACGCACTTTTCGCCGAACTCGACGT
GAAAACGGAGGCGGAGGCGGAGCAGCGGGAGGAGCCACAGGATCCGGAGCTACGGCTCCT
GCGCATGTACCCGTCGCCGGGCACGAGATAGTGGATATCTTCGATGAAGACTAGGCCAGT
GTTGGAATAAGCCACGGCGACTGGTACGGTCGGGCTCGTCGGGTGTGTCGGGTGCGCGCG
GGACGTGCGGGA
