Contig Data
morexGenes
Links



Map Locations of contig_48714 (4373 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_48714

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_64361 1 1607 bp AK356113 Available Available None





CDS Structure of MLOC_64361






Contig Sequence (4373 bp)

>contig_48714 4373 assembly3_WGSMorex_rbca.fasta
CGAGGACGAGTTCGAGGGCATCCCTGTCCCGGAAGCGGCGGTCTCCGGCGACTCCTCCGC
GCCGGCCGAGTCCGCCCCGTCAGATCCCTCTGCTGAGGAAGCGGCCGAGGCGGCGCCGGC
CACGCCGAGGGGCCCGGCGGAGCTCATCCGCGCGTTCGCCGTCGAGATCGCGTGCGTCAG
CTTCCTGATCTGCTTCGTGCTCAACTACTTCACTGGGAAGCGGCAGAACGAGGCGATCGC
CCTCGCCTGGGCCACCAAGTTCGCCACCAGAGACTCCATCTTCGACAAGAACTTCAGTCT
CCTTGGCACCGGCGACGGGAAGGATACACCTCTCCTCCTCAAGGAAGGACAGGACGTGTT
CAAGTTCTACGCCAGCGGCAGGCGGTTCTGCCAGGGGGTGCTCGCCACCATGGAGATGCG
TGCGCGGCATGACCTGCTGACAAAGCTGCTGGAGCTCGTCTTCCCCAGGAAGGATACCAT
CACGTTCGAGGTGGTGATGAACGAGGAAGCCATGGACCACGTGATGGTGGCCGTGGCTAG
GAAGAAGGCGGCCAAGGGGATGCAGAAGGAGGAGAGGGATCTGCAGAAGTTTGCCTCTGT
TCTCGCTTCTGCACCTGCTGGGAAGAAGTGGGTTGCAGATGAGCTTTCAGTGGTTGCTGA
GTCAAAGGAGGTTGCTGGGGATATGATCACTGAGGCTGTGCTGGATCAGGTGAGAGTTTA
CTTGCTTACCTCCATTCAGAATTTTGGTCTTATAGATACAGCTGAACTGGGTAACTGGTT
CCTTCTTAGTTAACATAGACACTGATTTAGATTTTCTTTATGGAAGCATCATAGATGCAT
CTCAATTAAGATTGGGCTAGTATTACTTTTGAATTGTTTAAGAATAACTCAAAAGCAGAA
AAACGGAATGTTTGTGATTTGAGAACCCAACATACTTTTCTTGAATGCCATTAATCACAG
ATATATGATTCAGATTATGTGCAAGATATATTTTAAAGTACTGAATTGAGCTTGAACTTA
CAGGGAGAATTAGCACCAATTGTTTCCCATGTTTATAACTAACATCCCAATGGGTAACTT
ATTGTAAGATAATATATTGGTGCTATATTATCAAGCGGTGAGAAAATCACCTGTTTTTAT
GCTAGCAATGATTTTATAACTGTAGAAGTAATGTATGAACATATCCTGTTAATGTCTTTA
AGAGTTTAAGTAAGGTTTTGTTGATTTTCAGCATGCCATATTTGTCTTGAGAATGGTTTT
TAGAGCAACTTTTGTGCCTATGATGATTTTGTGCATGATGAAGCCTCGTTTAGATATGGA
AGGAACATCTGGGACTTTTACTATCATTGTCAATAGTTCAATCATGCTAAGACTGTACCT
AGCAACCGTTTTGTGTGTGTTACTTAAGTAACTCTTCAATGTTAGTACAAGAACAAAGTT
ATGTGCGTCGTGTAGCCATTCTGCTTGAGAAACAGACGTTTGTAGTTAAGACCCTGCTTA
TCTTAGTTTTTTTTTTTGTATAAGCTGGCCTTGGTATGGAGCTTTATTGAAAAGGTAGTT
TTTGAACTCAAACAATATGTACAATAGAAACAAAGCAAAATTTGGCCCCTCACCCTTCCC
TGAGCTTAATGATCTTCCATAAAATCTGAAGAAAATCAATAGAACCTACCAAGAGGTTAT
TGTATTTAGTGTGATATTACCATGATTGAGCAATGCTACACGGTGCCCTACATCTATATA
ATGTTCTCATTTTTTTTTCTGCAGGTGCTTGGTGAGAAAGCATTCGAGAAAATGGGAAAG
TGGTTCATCTCACTTCATTTTTCAGATCAATTGGCAGGCTCTTACAAGAAAGTCCTCTCG
TTCAAGTTTGTGCTGCCAGATGCAAACAACATGGCTGATATGACAAAATTAGTTGCTCTT
GTGCCATTCTACATTGATTTGGTTGGACGTTACAAGCTGAGCTCACATGTAAGCACCAAC
TTTGTTTTTTCTTCCCCTTGGTTCACAGGATTTTCAGTCATATATTTTCTTAATCTTCCT
ACCCATGCTGAACTGCAGGCACGCTCGAAAACTGATGCTGCTAGGACAAAGGCTGCCCAG
GAGGCTTTCAGGGAGCTTCAGGGTGTGAGGCAGGAAACCCTGCTGAGGAAAAAGGCTGAA
AAGAAAAAGCTTATGGAAGAGGCAGAGGCCAAACTGAGCGCCGAGGTACTCCGGAAGAAA
GAGGAGAAAGAACGGAATCGGCAGATGAAGAAGGGGGCGCCCAAAGTTAAAATGCTGCGG
TCTTAATAACATGAAGAATCTGTCGTAGTTACTGGCTTCGCTGTTCACTCGCTTATTAGC
CAATCTATAGTTCAGCATTGTCTAGACTCTTTTATGTTCCAATTTTGGGCCATCAGGGTC
CGTGTTACGAGAATCAAGCGCAAGGAAGAAAAAAAGAAATGCTGACAAAGATGCTGCGGT
GCACTTTGGTTCACTCTTATCCGATTCGTGCACACAGCACAACAGCTCATTTGTAAGGAA
AAACTCAAGAAGACACTTCCCTGATTTGCTGTGTAATACGTTGATAGATCTGTGGTCAGA
AACTACACTTGGATCACGTGGTTTTATGTTTGAGCCGACTTGCTTGCTGTTAATGTTCGG
TTTACGCGGATCTTCTACTTGCAGGATAACCGTGGCAGCATGTTTTATCTGTTTCAGGCT
TATACCTTTATAGATATATTTATAAATAAAAGAAAATGCGGTTTGATCTGTGGGTTGATG
ATTTCTTCCGTAGGTAAATAATACTCCCTTTGTATCAAAATATAAGGTGTTTTGTGGGTT
TAAATCTAGACAGGAAACGTCTTATATTGTGATCATACTCCCTCCCTATCAAAATATAAG
TCAACAGTTGATGCTATGCGTGTTGCTCTTGAGGCGGGCATTCTTTCTCTCCTCTTTCAT
TTCCTGCAGCAGCGTCTCGCTTCCTTGCCGTCGCTAATGATCGATGGCAAAGCCAAGATC
GGTAAAGACCAGCCTGCATTTTCCCTCCAAGTAGGGCCCACCTCTCCTGTATAAACTTCC
CTTCAAGCAGGACCCATCTGTCATTGGATCATAACTTCTTCCCCAATAATCCCCGTTTCA
GAGCAAAGCGCGTTTCATTTCAGAGAAGCACACATTTCAATCATAATAGGGGGCAAAAAA
TTAGTAGCATTGCAACTTACAATAATTGAACAACTTTGCTTAGAACTAAACTACTTGATT
TGAACTAAAATACCTGCGTCTACTGTTAAATAGATAAATGTGTGGATGTTCTAACAGCGG
AAGCTTGGGCTCTTAGATTCGGTCCATCCCTAGCGCATCGGGCGGGGACGCGGGGTGAAA
TCCTCGTTATTAATTCTGATAATCCAGAGGTCACTGAAACCATGAATAATGGCGGATGGT
CGACATGAGCGGCGGCGGCAGTTTTTTATGATTGCCATTCTTTGGCTCATGATTTTTCTA
TTTCTAGGTTCAAACATTGTGATTTTCCTATTTCTAGTTAAGTTGGCTAGATTTTCTTTT
ACTGTTGATTGGTTTGAGGAGCTATGAATGAAATTATACCATTCCTCACAAATGATGCAC
TGTTATCTCGGTTTAATAAAGTTCATATGTCATTAAGAAAAACTTGTGTCTACAGCGGCG
GCTAATAAATAGCCTATAACTAAACTACATGCCGATGTTGGACGTGCCAACTCTCGCTGA
GGCACTTGGACTTGCGGCTATAGAAGCGTCGTCAGGATGTGCCGATGCTGGAGAGGCTAG
CTTGGAATGCGTTATTCGATGCAAAAAAAGCCTAGCCAAAACTTGCCTTAACGACCTCGT
CCCATGCCAGCCATGCGCGGGTGTCAGCCATGCGTGGGCGACGGTATTGCATGCCGCGAT
GGCACAGAAACGGGCATATGTGGCCTCACCCACGTTGGCATTCACCATAGTTAGTGTCGG
GGGTGGACGCGCAATCCGAAATTCGTCATTCCCGCTCTGAGTCCACCCTCCGACCAACAA
CCGGGGCGCGGTCAAAGTCGGCCCCAAATGACAACAAGTCTTCCTGCAGCATTGATAAGT
GAAAGTGTTGGATGGGGAGGCAAGAGAGAGGTTTATTCTATGAAAATAAGGGAGGGCATC
AAAGAAGGGATTGAATGAGGGTGAGAGTGGGGGCCGCCAGCCTTTTGTAACCACGAGTGG
TGGGAGGTGGCACCATTGAGGGGGTAGTTGGGCGAGACGGCAGACGACCATTAAGGGGCA
CATTTCCCAGTGAGAAACATGATTGCGCCATTCACATGGGCTCAGAAGCGAGGGGGTGCG
AGAGGAAGTGTAGGATCCAAAGTATGTCTAGAGGGGGGGGGGGGGGGGTTAGA