Contig Data
morexGenes
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Map Locations of contig_48662 (3604 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012




Predicted Genes from contig_48662

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_64334 1 2298 bp MLOC_64334.1 Available Available LOC_Os02g32030.1, FRAME:-1, EVALUE:6e-119, 13102.m03460 protein elongation factor, putative, expressed





CDS Structure of MLOC_64334






Contig Sequence (3604 bp)

>contig_48662 3604 assembly3_WGSMorex_rbca.fasta
TACTGTTCTACAAACCTCTGAACTTGAAGGCCCAACAACGTCTACAANNNNNNNGTTGCG
TAGTAGACATCAATATGCAAGTCAAATTCTTGGAGTAATAGCACCCATTTGATAAGCCTA
GGTTTAGCATATTTCTTTTTCATAAGGTATGTAATAGCAGAATGGAGAGTCGTCGCTGAT
AAACAGTGATTTCCATATCATCTATGAGGCTTGCGACAAAAATAACCTGAACGTGAATAG
GAGGATCATGGGAAGGTTTTGAGCGGCAATTGACAGCATCGGGCTACACGGGAGATCAAA
TGTAAAAAAGAGAAGATATACGTGATCAAATGAGTGCAAAGATCCAACAATGGTCAGTAT
TGAAAAAATGTTTTCTAACCTAGAATGGGAAGCCCTATTCCCCTCCTACATGCTGATGGC
TGCTGCAACGGCTTGTTCGGATCATTGCCCCTTGCTTCTCTCAAACACTATGACACCACC
GAGGAGAGCCACATTCAAATTTGAATCCTTGTGGCCACGCTTCCCGCGTTTCTAGGAGAC
GGTCGCCCGTGCATGGCAACACCCGATGCATCACACTTGTCCTCTCATCAGGCTCAGCAC
AAACATGCGTCGAAGTGCTACAGATTTGAAGATTTGGGCCAAGTCCCTCTTCAGCGATGC
AAAAGTATAACTCCATCTCGCCTGCGAGGTTGTTCTGAGATTGGATGTCGCTCAGGAAAA
GAGAAGCCCGTCTTAGAGTGAATTCCTTCCCCGCAAGCAGCTTAAACAAATTTTTTTGGG
TCTTGCGGTTGTCGAGCGAGCTCGTAAGAGGCAAGCTTCAAGGATCACCTGGCTTAAGCG
GGTGATGCATTCGGTATTAACTGAATACCACACCGAATTAGTCGGTTAACCGAATTTTCG
GTTTTCTTTTTTATGTTGGCATTTTTGGTTTTTAGTTTTGTAAACCGAATTGGAATAAAA
ACCGAACGGTAGAAACCGAAAATTCGGTTTATACCGAATGCCCACCCCGAGACATGCCAA
CTATCCCAAATGAGGGACTTGATAACCCCTTCTCTGAGCCAGAGGTCTCGGTTGCGGTCA
TGGCATCTCCGGTCGAGCGTGCTCTGGGCGTGACGACTTTTCGACAACGTTCTTCCAGAG
CTGCTCTTGAACATTTCTATCGGTTGTGTGGTGGCAACTTTGCTGATCAGAATACGGCTC
TCATTGCCCTGATCCCCAAGAAAGATGGAGCAAGGAAAATGAGTGATTTCCAACCAATCA
CCCTCATCCACTCAATTGCAAAGCTGATCTCCAAAAAACTATCTATGCGCCTTACTGTTG
TCATTTACAAGATTATCAGCCCTGCCCAGACGGCGTTCCAGAGAAAAAAGTGCATCCACG
ACACTTTTTTGTATGTGCATAACACTGTCAGAGCATTGCACCAAGGCAAAACTCCAGCGC
ACCTGCTCAAACTTGACATTGCCAAGGGCGCATAAACCTTGGGTCCTGTGCAGTGCTGAT
CGGTCTTTGTTCGCGACCTCCACCAGCGTGATCATCGGCGATTGGGCAACGACCTCGTTC
TGGTTCTGCTCGTGGCTTGGGGCAGACATCTGTGTCTGGCATATCTAACGGTCTTCGTCC
TGTCCATCAAAAAAAAAACAATAAGAGATGCTCTGCTGAATATCTTTGTCATGTCAATAA
GGAAAAACAGAACAATAAGAGATGCTCTGCTGAATGATCGTTGGATTCTAACTATGGAGC
AAGGATCAGCAGACTCCATCAAATGGACGTTGTGCAGCTTTGGGCAGTACTCCGCATGAA
CGGCTTACATGGCCCAGTTTGAAAACTGTCAACCAAGCAACTTCGAAAACTGTCAACCAA
GCAACTTCGAAGAGCTCATCTGGAAGGTGTGGGCGGCAACCTGCACTGGCTGCTGCGCTC
TCAGCCCAGAAGTGTGGAACGGAGGCTCGACGACCGACCGCGGCAAATAGGTGTGGGCGG
CAACCTGCACTGGCTGCTGCGCTCTCAGCCCAGAAGTGAAGGGCGCAAAGATAATGATCG
CACTCAGCAAATGGACACCATATAATCGAGGCATGTCATAGGGACGTGGAGCAATGGAGG
ATGGCCGGCGCAAAATGCATTGAACAGCTCTTTGGGGAGATGACGACGTGAGGAGTTAGC
TTCTGAAAAGGATCATAGGTGCCGAAAACAAAGCTTTTCTCAAAATGCTGTAATTTTCTT
TCACCCACCGATCGCTTGATCAACATTTTTCATTCCCTCCTCTAAATCAATTGAACGCCT
GCGATGCTGGATCTTTCAAAAAAAAAAAACTAAGACAGAGAGGAATTTGAGGTCAACAAA
TTTATGCCATGTGGCAGCTACAAAAAGATACCAGTGCATATGCTAAATTCCAAAGAACCT
ACAGAACTGCAGCACAAGTAAAACCATCAAGCAAAGCAGCCTCGACTTCCATCAAGACAA
CTCCTTTTTGTTGTAACTATTTCAAACAGACACAAAGTGAGAGGAATATCAAGGACATAA
GCCCCGTTTTTAGAAGCCACAAACAAAATATAGACAGTAATCTGTGAACATATGGGTGGG
AGACAATACCAGGTGAAGATAACAATAACAGGGACGAACTGTATTAAAATACTGACACAA
AACCTGGACGAGTGCATCAATCAAGGTAAAAAGAGCAAGCAGAAAAACTGCGAGTAGAAA
AGCTAGTGCAATGAACCAAGAACACAACAAGATGGATTGCTGGACAAACATGAAAAATAT
AGAGCAAGACTAGCAATAAAGAACCAGGCAGAGCTCTCAAGATCTAACACAAAAGCAAAC
ACAAGACATAAAAAACTACCAGGGTATAACAGATATATGATCTAAGTTTTAACATCGAGA
GACATCAAAACAAAGTGCCAGTACCACGACAGATAGGACATTGCAATAGCAATACAGCGA
CAGACTCAATTGACAGAAAATAGCGCAGCTCTCTTAGCAGCATAAGCAAACTAGACCATG
TAACAGAATCAAAAATTTAGAGCTTGTCCTCAAAATCAGATAGAGGGGTCATCTGTTCCT
TGAGACCCTTGCGCTTGCGGATCTCCGTGACAAGGGTGGCAGACTGGGAGCCAGCCTCCA
AAGGATCAGAAGACATGATGTCCCAGTGGTCAAACACACACTGGGGGAAAGCCTGGCCAG
AAGTAGCTGCCCTGAGGGTACTTGAGAACCCGAAGGACTCAATGACCGGGAGGTAAGCCT
TGATGTTGTACAGCGGGGTACCAGGTCTCTGCATCTCTTCAAACACGTGCCCTCTCTTCT
GATTCAGAACACCATAGATACCACCAAGTGCATTCTCAGGGGCCTGGATCTCAACCAGGT
ACACAGGCTCCAGCAGCCTTGGCTTAGCCGTGAGCTGAGAAGCGTAAATGACCCTCCTGG
CTGTTGGGATGACTTGACCACCACCCCTGTGAATAGCATCAGTGTGCAGAACAACGTCAC
AGACCTCAAAGCAAATGCCACGCATGTTTTCCTCAGCCAGAGCACCTTCCTTTGATGCCC
ACTGGAACCCAGCCACAACAGAGTCCTTGATTTCATTAAGATACTGCACTCCCTTACACA
TGTC