Contig Data
morexGenes
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Map Locations of contig_48593 (3368 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location No map location




Predicted Genes from contig_48593

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_64287 1 834 bp None Available Available None
MLOC_64286 1 612 bp AK354520 Not available Available None





CDS Structure of MLOC_64287






CDS Structure of MLOC_64286






Contig Sequence (3368 bp)

>contig_48593 3368 assembly3_WGSMorex_rbca.fasta
GTGAGATAGGGGGGGGTGTGGGGGGGAGGAGGGCGGGGGGGGGNNNNNNNNNNNNNNNGG
GGGAGGAGGGAGGAGGGGAGGGGTGCGGGGGGTGAGGGGGGGGGGAGGGGNNNNNNNNNN
NNNNNGGGGGGGGGGGGGGGGGGGGACCTCTGCTGGACAAAGGGGCGAGAAAAAGGACAA
TGCTAGCCCAAGAGAGCGCTGCACACTATTCTTCTTGTTTTCTGGGCAGTTGCTTCGAAG
TTCAAACATCAAACAGACCATAAAATTTTCACAATCGCTTTCCCCAGATCACCCAGGAGA
CCAAAACCAAGCTCATGACGCAGACAGTACATGGTCACCGACATTGTGAATGATTCTCAA
GTCCATATCAGCAATGAAAATGGTAAAATACTACAGCACAGTACAAGCATTCAACCAGGA
AAATGTTTCCACCGTGTACTCTATTCCAAGAGGGCAGCCCATCAATGCAATGCTCACACA
CGATAAACATAAAGGAGATTCCTAGCTAGAGGCAGCTGTAGCCACCAAAATGGCCTGAAA
TGCTGAGATTTGTCCATAAATAAATACTGAAAAAATTTGTATTATTTGTAATGATGATAG
GACTTTCAGTCTTCCTTGTCCATGTATAGCCAGCCTTCATAAGGAATACTGATCTACAAA
TGCCAGCGCTTAACGCCGTCGCTTTGCCGGGCTTGGGACGGTTGGCAAAACCGTCGTAAA
ATTGAAGTTGCCAGAGAACATAGCTTCTTTATCTGTTGTTGAAAAGTTTAGGAAGTGCAG
AATTTAGTGAGTTTAATATACAACAATAGGTTTTTCAATGTAAGGAAAGCGAGAAGAAAA
GGAAGCTAGTTTGTGTGTGTGTGCACGGGCGTGTGCATTTGTATGTGTTTGTATCGAAAG
GATGTGTGTGTGCATATGCATGGGAGATAGAGATGGGAGAATTAGTCAGCACTGACCTGT
CAATGATAGACAAGTTGCCTCCCTCCGAGTATATCTTGCCAATGCCTGAGATCCAACAGA
ACAGGCAGTCTTAGGTTTTGTAAAATATGATAGGTAATCACCTATTTTCTAAAGCTGTCT
CCATCAGAGAAGGAACTTGCCTGGACAGCAGGGGTAGCAGCTGCATCCATAGGCTCTGAA
CCTTCGTCAGCATACACATTCCTAACCATTCAACACAAGTAACTATCATACATAACATGG
CAGTGCTAGATTATGAAAGAAATACAGCCCACAATTTACACAGCTACTGCCTCTGTTCCA
AAATATAAGTATTTTTAGAGATTCTACTACGGACAACATACGGAGCAAAACGAGTGATTG
TACACTCTACAGTATGTCTATATACATNNNNATGTAGTCCATAGTGGAATCTCTAAAATG
ACTTATATTTAGGAACGGAAGGAGTACATCACATAATTACTATAGTGCCATAACCAGAAA
GTTACCGCTTTGATGTTAGAAAGCTGCAGTACTAATACATGTGTGTGGCGGCTCACATAT
AAACCTATTAAACTTTGTCAAATACAAAATCAGAAGTAACACAACACTTGGCACAGTATG
TTCTTGTGCAAGTTTCCTAGAGTAGAATCCACCATACCTCCTGTTGAACCGGCAAGGGCC
CAAGCCCATGTGAGCAGGCTGACCTAGAAGGGGGCATCCAGTCCTCCCGTTTCCATGTGA
GACACCACACACGTGAGTCCTCGCACGTGCCACCAGACACGAGAAAGAACCCCGTCTGAA
GGTACTCCTCTCCCAATTCAACATCGTATCAAGCCAGGTTATGGTGGCGCCGGCGTAGTC
GCTCATTGGCGAGGCGATGGAGCCCGGCGGGGTCAGGAGAGGGGAGGATCCTGCTCACAC
TGCTGCGGCGAGGCGGCGGGGCGCGCGGCTGCGCAGGCGCTGTTCGCGCAGAGGCAGGGA
TGTGACGCAGGGCGGCAGCACGGGTGCTGCTGTGTGGCAGAGTAACAGGAGTCGGGCAAG
GTGCAGCTGAACCAAGGGAGAGAGTGTGCTGCTGCTGCGTTGCACCAGGGGAGAGAAGAA
GAGGTCTGCTGCTGTGTGGCACCAGGGGAGAGAAGGGTAGCTGCTGTGGGTTTTTTTTTC
CTTTCTTCTTCAAGGATCGATATGTTCCTGCTGGAGCTGTTGATGTGCTGTTCCTGCTGG
AGCTGCTACTATGCATCTGAGTTGCTGTTTTGCTGCTGTGCGCGGGTACTGCTGTGGAGA
AGAAGTGTGGCTGTGGTGCTGCTGGAGCACCAAAGATAGCTGAACCAAATGCTCTTGCTG
AGGCTTTAGAGAAGCTCGCTAAGATCCTCGCAGAGTCCATCGTTCCTTGACAGGAAGTGG
CTCAGAAGCTCGAAATTTTGCCCATGGACATGAAGCTAGAGGGGGCCACAAATTATTTGG
GTTCATCCAGGAGGGCTTTGTGGGCTGTGGAGCAGAAGGAGCTTGATGGACATTTGTTGG
GCAACGTTGCAGAACCAGAAGACAAGAGTAGTGCAGAGGGAAAGAGGTGGAAGGTCATCC
AGTCTGTACTTATGGTGTGGTTGTTGAACTCCGTGGTGCCCTTCACTGGACGCTCTGTGG
AGGGGCTATCCACAGCTGCTGAGATATGGAAGATTCTATCCATCCGGTACTCTGACAAGG
ACAATGTCATGCTCATTGCTCAGATTGAGGACAAGATTAGGTTGCTGCGCCAAGATGATG
GCATGTCAGTGATGACATACGTGGCAGAACTGCAGACTCTGTGGACAGACCAGGATAAGT
TGGAAGCACTGAGCAAAAATAAGACGTGGGTGCTAACCACACTGCCGGCAGACCAGAAAG
CAATGAGTTGTGAGTGGATGTATACAGTGAAGCAGAATCCTGATAGGAAGGTGTAACCAT
ATAAGGCCAGATTGGTCGCCAGAGGATATAGCCAAACTTATGGAATTGACTGTGATGAGA
GTTTGCTCCCGTGGCAAAGATGAACACAGTAAGGATATTGGTCTCCTGTGCTGCAAACTT
TGGGTGGAAGCTGGATCAATTAGATGTCAAGAATGCCTTCTTGCATGGTGAGTTGCAGGA
AGAAGTGTACATAGAAATACCAACAGGTTTTGGAACTTTGGAGACCACGGGAAGGTACGT
ATGCTGAGGAAATCCTTGTATGGACTAACGCAATCACCGAGGGCATGGTTTGATAGGTTC
AGACGTGTTGTCCGTGGTATGGGGTATGGTCAGTGAAGCGGTGAACACACGATGTTCTAC
ACGCACTCTGATCGGAAGATCACCATTCTTGTTGTTTATGTGGATGACATTATCATCATT
GGAGATGATAAGGAGGAAATATCGAGATTGAAGGGTTGTCTAAGCAAGGAGTTTTGAGGT
AAAGGATT