| Morex x Barke POPSEQ 2013 | Oregon Wolfe POPSEQ 2013 | Morex Genome Release 2012 |
|---|
| No map location |  |
No map location |
Predicted Genes from contig_48461
| Gene ID | # CDS Predicted | Max CDS Length | Probes in Cluster | FPKM by Treatment | FPKM by Replicate | Top Rice Hit |
|---|
| MLOC_64181 |
2 |
1039 bp |
None |
Available |
Available |
None |
CDS Structure of MLOC_64181
Contig Sequence (5163 bp)
>contig_48461 5163 assembly3_WGSMorex_rbca.fasta
ATTCTATCACACATATCCTTCTTCCGAGCCAAAAGTGCGGGTAGATCAGAAAGTGATGTC
TCACCAGGGTCGCGCCCTTCAGATGATTCATAACTTTCCAAGACTGCAAACAGACATGTC
TATGTTAGTTACAAAACCAATACAGGGGAAAATACGGATAGGTAACAGTCAAAAGGGTTC
TTGGTGGCAGATCAAGTGAACATGCAAATCAGTTATTTTTGGTGAAAAACAAATATAGAA
GTCCTCAAGAAAATCTCACAGAACCAGTTGAACATGGTCCGCAGAGGAGCAAGTTCATTT
GCTTTGTGAGATATGAAAAAGAAAATACCTAGTGAAACAACAATCCAATTTGATCTGTTC
CACTAAATATTCATTGATGTACATACAAATGAATCACATTGATCCCAGTTTTCACCTGAT
ATTTTCCCATGAAAAAATACCAAGAAAGTAAACAAAAACAGTTGCCATTATTAGACAAGA
TAAACCTTAGGAACAGTATCTTAGGTTCTCATATCATCACCTCTCATCGCGTAGTACAGT
TTAGTTGTTTTTTTGGACAGATCCTTCCAGGGCACAGAGATAGCTTCCTGTATGAAAGAA
AACCAAATGTAAATGCAGACATTGCGATTCAAATTGTAATAATTGCCACATGAAGCATCT
AGAAGGGTGTTATATTGAAATTTTTTAAGCAAATCATAAGGAATTGAAATTTTATATTTG
GCAATCGAAGCATCAAATAGGGGGTGATATCAGTTCCTGCAGGTAAATCGTATGCAGGTA
TTCCAGCAATATTGTACAACTGAACTACAGGAGAAACAGGACAGGAGTACAATAACAAAT
TGAACCAGTACTTAAGTGGCAACAAACACATAGCAAGCACGCATAAGTACTTGCATGGAA
CAAACAATTTAAGTTAGTATACACTATACAGAAGCAGTATAAAAAGAACCAATGACCAGA
GCTACCTTCAAGGCTTCAACAAATGTATTATCCAAAATAGAAATTGCAGGCCTTTCCAGA
AAAGGGTAGATGGGCATCACAGAGCTACATCAGAACTAGAGGAAAACCGAATTTATCTTC
TTTTTTTCTGCTGCTACAAAACACTAGATGTTCTATCGTAGAAGTTATCAGCATGAATTT
TATACTCCCTCCGTTCCTAAATATAAGTCTTTTTAGGGGACTACATACGTAGCAAAATGA
GTGAATATACATTATAAAGTATGTCTATATACATCCGTATGTAGCCTCCTAGTGAAACCT
CTAAAAAGACTNNNNTTTAGGAACAGAGGGAGTATTATATAATATTGAAAACATAACTTG
AATTGCTTCTGTGTATCATGTAATTTGAACAAGTTGCATACTAAATACTCCCCAGAAAAG
CACATGGCAGAAAAACAAAGGATCGCCAACTTGAGGAGTACTCCCTCCGTTCCTAAATNN
NAGTCTTTTTAGATATTCCACTAGGGGTCTACATACGGAGCAAAATTAATGAATCTATAC
TCTAAAATATGTCTATATACATCTGTATGTCTATATACATCTGTATGTCTATATACATCT
GTATGTAGTTCCTAGTGAAACCTCTACAAAGACTTATATTTAGGGACGGAGGGAGTACAA
CACAAGAGAGCACGCTACTGAAAGACTTTATCTCTATCTCTACCTAATAATAAAGCGGCT
ATTGCTTCTATCAGAAAACCCGTCGCGGCCGTTTTGCAAAAAGGTCCCTATAGTTTTAGG
TAATCAACCCGCAGTACGCTTTTAAGTCAAAACGAATCGTTTTTTTTTTTTGTTTTGCAA
AAAAGGCCCAGTGGTTTGGGGTATTCATCATGCAGTCCTTTTAAGTGGATAACGCCCCCC
ACGCCCGTCCTGCTCCTCACCTTTCGCGGTGGTCCGGTGGCTGCGCTCCGCGAGGTGGAA
GATGGATGGGGAGAAGAGGGGCGGGGGCAGGGATGGGGAGGGAATGGTACAGGGGCGGGG
GTGGGCCGGAGCTTGCGGACTTGTGAATCGGGTATGCAGCGAGGCTGCTGGCCGGATCTG
AAGCACGATGCCATGGCACGTCCTCTACTTCAGCACCGACAGGGGGGTGTTGCTGCTCTG
GCCAGCCACCACGGCTGCACACTCCAGGAGACCCCCACGGCCTGCTACGTAGCATAGGGC
GACGACAACGACGGGTGACGGTTCAGCAAGAAGCCGACGAGAACAACCCCTTCTACGAGT
TGATACAAATTGGCTGCCGGTTTGTGCAGGCTGCTGCTACCACCTGCCAACGAGGAAGGA
ACCAAAGAACAGAAATTGGTTGCCGGCTTGTGCAGCAACGGAGTAGCCTGAAGACCCCTC
CGACACTACTAGCAGTCTTTGTGTAATAAAAAGAGGGGAGGGAGAGACCGACGGAGGAAG
GAGGAGGAATTAGTATAGCTATCCTTCCTATGGCACAACAATCTGGTTGGACGCCATCTC
ATGTTAGTAAATCAGTATGCTATTGTTGCTATCAGTATGCTTATCTAAAGATAGGGTTGT
TCACCAAATTAGTTGACTAGGATTCATGTCCCCTGTTCCGAACTAGCACCCCAAGTAATT
CTATTCTTAATTGATCCATTTTTATGTCATCATGAAACTTAACCTCTACCAAATGTAATT
GCTTTACAACGAAGAATGTCAACTCATTTTGTCCCGTTGCAACGCACGAGCATTTTTGCT
AGTAAAGACCAACCTAAAAAAAAATCAATACCTGCAGACTAGGATATTTCAACTCCTGCT
GTTCAGGTTCTCCTCCAGGCTTCTTCTGAAAAATAAAAATCAATTTCAGGGATGTACATT
TTAAGAATGAACTGAAGACAAAAATTTGCATGCCACTAGTTATCATAAATATGGAAGGCA
TTCTAAGCATTCTGAGTATCACCAGCAGTAGCCCCAACTTTAGAGCCCCTGAAAGCCAAA
TCCGAAATGTGGGCTCCCTTATATCCTGAGCCCACAAATAACGGATCCAACTCCAGCAGC
AGCGCCCAATTCTCAGCCCCCCATTATTTCGTGTACTCATTGACACATGGGAGTGATTGC
CATTGAGCCCAGTATTTTTCTTAAGCAAATAAGAAGGCATACATGTTTTGGCTTGTGAAC
AAAGGAAGTAATACAATGCCAACCAACGGATCTATAGACTAGATGACACAAGTCCTAAGA
AATACATACCTGAAGATAGCTATGGTTCTGCAGATCAACAAATATTTCACCACAAGAATC
CTTGCACTCTACAGAGTAGAAGGCAATATGCTTGCTTCTCTTCCGGCAGTTGTCATTAAT
AAACAACTAGAAACATAACACAGATGCAAAAACAGCAAGGATAAGAAACAGAACGTGACA
GAAGAAACTAAAAGTTATGAAAATACTACTTCAGAGAAGGATCTACACCTTTGTTTTAAG
AGATGCGCAGCTGACTACAATAATGTCGAACCTGTCAATGAATGTTCCATCATTTAGTGA
TGGGTCACCTGGAGAAAATAACATGATAGTTAGAACTTTTCCAATCAATACTGTAAAAAG
AATCTCAGATTTTATAGCCAATAAAGAATGGTTGAAAATTTATCTTGCAGAAACAATATT
AGTAGAACAGTGTACAATACCATAACAACTGATTGTTCCCATCATTAAATGATTTTTCTT
GCAAGAACTTTCTCGCCAATAGCAGCGTTATGAGTGTTTTATCATTTAACACAATAAATT
AAACACACTCCTGCCAGTAATTTTGGAACAGACCAATTCATGAATACAAGACATGATCAC
TCTACACAACGTATATTTCTTAAATATAACCAAACTAAGGAAAATGTGCATCAAACTATA
CAGCTCACCTTTTGCAACAGCAACTCGGACCATTGGATTGAAATCTTTTAAGGACTCGCA
GCAAACCTCTGCCCGTGATTTACCACCATACATACTCTCATCATGAGGAATTAGGAAGTT
TGAATTGAGATCATCCTCCGTGACTACGTGATCGTCCATCAAGGATAAACTGCCAACTCC
TGCTAGAACAATATTTTTGCAGAACTGCGGAGTAGGAGAGAAATCAACTTTAGTGTATGT
GATTGCTTTCACTGAATTAACAGACTGTAGATATCATATGAAAAGTTAAAACATTGAAAT
TTAATTGATGGCAAGAAGAATTGGGGACCTCTGTTTGGAACATAAGTGTGGTTTGACAAT
ATGGAACATGAGTTGAGAATCAAAGGAACAGTAAGTTATAATTTAATTGTTTCGATCTTG
CAAAGAAAACTATTTAGCACTTACAAAGAAAACTGCTAGCAGGCTAGCACATACAGTATA
AAGAAACTCAAAATGACATAGTTGTGCATTTCAACTATGCAAGATACAGAACAGTAGCCC
AATCCACAGATATTAGTTATAACAACCTTGAGCCGTAATAATTACTCCCTCCGTCCCAAA
ATNNNTGTCTTAGATTTGTCTAGAAATGGATGTATCTANNNNNNNNNNNNTGACTAGATA
CATTCATATCTAGAATAAGACAAGAATTTTGTGACGGAGGGAGTACTATAGTAACACCTT
GAACCCAAATTTACATGCTATATTTTCAGATATAATCAATAGCAGACCATTAATGATTAA
AAAAAAGATAAATTGTCAGTGAAGCACAATAATAAAAGGCAATTTCAGTTACCCACCTCA
ATAGTAGTACCGTTCACGCCGCACACAAGCACATGCGCTTTACTTAGCCTGCTCCAAGCA
AACACAAATATAGCAGTCAGGTAAAAACAGAAGCAATGTTACAGAAGAGGCAGAAATTAC
GCATGCCCCCAAACAAAAGCGAAATAGAACAAACAACATTTGCAGGAAAAAAGAAGCCCA
AAATTTTTACCAAAACCATGAGACCGGGTTCACATAATCATGGGGGAAATCCAGTCATAA
CAGAAGAAACTTTTTGGTACTGTGCAAAAGGTTGAATCTCGTTTCGAAGCTCGCGAGAGC
CCCAGAAGACGAAAAGGTGGATTCTCGAGACAAGAACAGCATGCGCTAACCCGGCAGGTA
AACAAAATTAATGGAGTAAACGAGAGAGAAAAAGAAGAAGGAGAGGAGTTGGGTTTTCTT
GGGAGGGGGGGGGGGGGGGGGCCCTATCGGGGGGCCGCGCCCCCCCGGCGGGGCCGGGGG
GGG
