Contig Data
morexGenes
Links



Map Locations of contig_48404 (6699 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012




Predicted Genes from contig_48404

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_64134 2 1486 bp MLOC_64134.1 Available Available LOC_Os03g10260.1, FRAME:-3, EVALUE:1e-28, 13103.m01145 protein expressed protein





CDS Structure of MLOC_64134






Contig Sequence (6699 bp)

>contig_48404 6699 assembly3_WGSMorex_rbca.fasta
TGCCTCTAGGGCATAATTCCAACTCGATGTGCAAAGCAAGGTGGACGACGTGGATGGCGT
CGGCGATGGGGAGGGCAGAGGGCGAAGCGAGGAAAAGGGAGGAAGAAAAGGGGTTGTGCC
ACCGACCGTGGGGGGGGGGATGGAAGGACAAGGGCACGCGACGCGCCCGTTCGCGCGTGT
TGGTTTGGCCGCAAATGTGGCCCAAACTTGTGCCGGGAATGAGTCGAAAGAGGACTGAAA
ATGGACATACGTTCGTTTGCTTCCATGCGTTGGGCCGCCTTTGGTGTCCATTTACTCTCC
CAAACGGACGCGGGCGGACGATTTAGGGTCGTGCGTTAGAGTTGCCCTTAGCACATGTTA
ATTTGAACAAAGGGAGACACACATAAACAAATTTCATCGTTAGAAAAAAATGAATCATGC
GATAAATTAAGCAAACATAAATTTTAAAAGGGGAAATCATATTGTGCACTTCCATTTTCT
CTAGCCTTGTCATGCCATCTATACTAATATGCTAAAAAGATGTAGTTTTTGAAGGACAAT
GAACTAGTGGCATTAGTATTAACCTGAAAGAGGAAGAAAAATATATAATATAAAATGAAA
AACAAGAAAAATTGCACACAATTTACACATAACTATTTTTTATAATACACAAGAATAAAC
ATATGCAGTAGATTTTGTAAAAAAAGGATAAAGGGTCAGTTGCCTGAAACTCTAATATTT
TGATGGTTTCACATTGAAGAATTCACGAACAAACAATAAATATAAAGATATAAAATTACT
ATTAGAAAGAAATGAATCAGTGGAAATACCAATGATCTAGTAGTTTCTAAGAATGAATGA
ATTGGTGACATTGTATTACCTTTTAAAAGAAAAAATTAAAGTAGTGACACAATTTACGCG
CAATTTACACAAAAAGTCCTTTTTAAAAACTATTCAAGAATAAGCACATAATAGTGTAAG
TTTCACAAAAAAAGTTTTTTTAAAAAGGATTGAATTACAGGTATTGTTAATACCCCGAAA
CAAGAAAATAAATGAACAAAAGCTAAAACTAAATCAAAATAATGGAATTTTTCAAGAAAG
AGTAAGTTAGTACATTGGTATTACCCTTAGAAAAACAAAATGGAAATAATAATATGAATA
ATAATTACAAAAAATAATTACTATGGGAAGAATGAATTAGTGGCATTGGTACTACCCTTA
CATAAGAAAAGAAAAGAGAAGAAAACTAAAACAAAATAAACACAATGAAGTTTTATAAGG
AAGAATGAATTACTGCGTTGATATTACCCTTTAACAAGACAAAAATTAAATAAAAAACAA
AGACAAAATGATGAATTAGTAGTTACTAAGACATGGAAATGTGTGTTTTTCAAATATGCA
ATAGTTGGCACATAACGGTTATAGTTTCAAGAAAAAACATTTTTTTCTAAAAATGAGTTA
ATTAGTGACATTGTTATTACCCTTAAAGAAGAAATAACATGGAATTAAAGTCAAAATAAA
ATAAAAATTATGCATTTTACAAGGAATAATGAATTAGTGCAATACAACCTTAAAAAGGAA
TAAATGAAATAAAAGTAACACGTAATCCAAAAAATAAAGTCTATCCCTACGCCGCCGTGA
AAAATCCCCACACCTCACCACCGACGCCTCAAATCCGCCGCTGCACGCCACATTCCGCCG
CCTAGCCGCTCCAATCCACCGTCCAAGATGGCCAACTCCGGTGGCCGTGGCAACGACGAC
CCCGAGAGGGCTCGTCGTATCAGATCCGACGCCACGCGGAAGGGCGCCACCCGTCGGTAC
ACGGAGTGGAGCCTGACGCCGTTGTCGTCGCTCCTCCGTCCCGAGACAGAGGACCGGAAG
ACTTCCTCCTGCCGACGGAGGCGGACAATCTTTTGCCCGTGCTGTAAACAGCTTTTATGG
ATCACAAAAATACGGAAACTGCTGGAGATGCTCTTACTGAAACCAAACTTCATCAATATC
CTCCTTCTTAGAACACTCCATTCAGTAAACCTGATCCTCCACCCCGACAGGAGGCCAGTG
GGATGAGTCTGACACAAGTCGCCTAAGCTGCTGAGCAACCTTGGAAGCTGGAACCGTGTC
ACGGTTCAACAGGAACCATGCACGTCACGGCACCTGGCTGCCACCAGCAAAACCTCCGCG
GAGCTCGTTCGTCGTGCCGCCGTGTCACATGGGCCATGGCCATGGGGAGCCGACATGAAC
GGAGCACGTAGGCTAGTAGCACTTGCCTTTCGCGCGATCAGCAGCCTCAGATCCCGGCGC
CTCGCCCGGTACGGAGGGAGAGGACATTCTCTCCCATCTCATGACTGCTCGCTGGCCGCC
CGGCTGCGTGCCCGGCTGGCGCACCGTCATCGCGCGCCGGGCGGGAGCAGGCAGCAGTAC
AGCCGGCCTAGCTGTTGCGCGATGGCGACGGCGCCGGCGCCGCGCCAGGACACCCTTTCC
GGGCCAACGGGGTCGGCGTCCCCAGTTGCGGAAACATCCGTCCATCCCCATCCCATCCCC
CGTCCCACGGCGCCAAACCCCGACCCGGCGTCTGGCTCTGGCTGGCCATACGACCATCGC
AATCGCATGCAACGCGCGTCTCGGCCACCCTGGTTACGAAAGCGACGGCGGCGGCCATTC
TCATGCTCGGTAGCAGGAGTAGCACAGTGGGAATGGATGGAGAGACAGACATCCCCGTGC
TTTGGCATCGTCCTATGCAAATGCAATGCAATGCAATGCTGGTGCCAGGAGATAGCGATC
ATATGCGTACGTGTAGTTGGATTTGCATCCACGCCATGGCCACTTGGCCAGCGCATGCAC
CATGCAACTAGCGATAATGCAAGACGGCCCTTCTGTTATGTTCTGTCTGCTTTACTCTAT
CTGTGTGGGAGAGAGAGTGAGAGAGAATCTGTTTACTTAAATAAATTATTACTACTTATT
CCCCGCTCAGACACTGGTACTCGGGGCGCACATGCCGTTTTGGGTGCAATAAAGAATTGA
TCAGAGATCTTGCGCCCCTGAACCACATAAACTGTCGACCACGCTGCTCCTGCTAGTAAT
CACTCGCTATAAAGCCATCTGCGCGATCTCTCTCTCTCTCTCTCTCTCTCTCTCTCCCGT
CGACCGATCGATCTGGCTTGGCTTCTGGCAGGGTGGCTGGCTGGCTGGGGCTAATCCAAA
TTTGAGTGCCCACGTGTGGCTGTGCCCTGCGTCTGCGTGCCACTTTCTTTTGTTTTTGTT
ACCATCAAACACGACAAACTAAGAAAAGTCCTACGTGGAACCCGAACGAATGCAGTCTAG
TAGCTAACAGCTTTGCTCTCCCTTTCATTATTACAGTAATTTGCTTCTAGTCTTGTAGTT
ACTCAATTTTCAAGTATCAATTTTCTAGTGGATGGCGATACTTGGTTGACATTGATCATA
CGTGTTCCTCTTCTCTGAACCTTCTATTCAAAATATCTAGTTCTAGAAGAGGAGAGGGCA
GTAGATGCTTCCATCGTCAATCAACTCAGCTCAAAGATGGTGGATGGAGCGGTTGACTTC
AACGCTCGCGAACCTGAGAGAGAGATGGAGATGGAGATGGAGATGGGGCGCCATCATGAC
AGTGCAGGAGACGCATGTGGTGCAAAAAAGATGTCACACCCGCTTGTTTTTTTTCCCTCA
GGTTTTTGTTTCCCACTGCGCTGACAGCTCAAAAGCGGGGAGCAACGACAGGTACTGCAG
TCATGGTGAAGCCAACACAGGACGGACACAGGCGCAGAGCATCGAGGAAAAATGAAGTAG
CAGCAGCAGCAGCTAACGAAAACTGAACTGAAGAAAACTCAGCCTCAAGACTTGAAAGAG
AGACTCTCGCGACGCGACGCGACGCAACGCAAACTCGTTCTATTCTATTCTCCTAGCTGC
CCGCCTCCTCTCGGCTTCCGAGAACACAACGGAGCAGAGCAGCCGCGTAACGGCGGCCAA
CGGCGACGGCCTCACCACCTCCCGATCTTGTCACCTCCGTCTCTGCACCCCTGCGCGAGA
AAAAAAAAACAGAAACAATTAAGTTTCTAGTACATAAGATTGTAAAAGATTGCAACTTTG
CAAGGCTGCCAGTGTGCATCAGAGAGTGGAAAAAGGTGGGGATAATAGTCACCTGTCTTG
TGGGCATTGGTTTGGTAGGGGCAGGGGAGTACTGCACTTGCAGGTAGCTGCCCAGAGGAG
ATCCGCTCAAGGGAGACTGCAATGCCAGAAGATACATGCTACGCGGATTAGCACACAATA
TAAGCAAGGAATTAGTTAGGCGACGTTAATGCGGCTCGACGCTGGTGCGCACCTCGAAGC
CCGTCGTGGAGAAGAAGGTGGATGAGAAGTCGGGTGTATTGCTGAACTCCATCGCCGACC
CGGCCGCGCCGCCGTAGACATTGGCCTCCGGGGAGCCCATCACCTGCTGGATGATAGCTA
ATGCGCGTCAGAACAACTCACGAGAAAGGAACAAGGAATCAAATCAAGTGCCTTACGTTG
GAGTAGTTGAAGAAGGCTGGCGAGCTGGCCGTGTCCTCGAGCAGAGTCGAGGCGGCGGCG
GAGGCTGTCTTGCCCTGCCGCCTCGCCGCCGCAGGCTCCGCCGTCCGACGCCTCCTCTCG
GCGCGCTGCGCCTTGGCCAGCGCGGCCGCGCCTTGGTCGGAGCCGGGCGAGTACTGAAGC
TGGCGCGGGCCGGAGGAGGCGTCGGAGATCATGGACAGGTCGTCCTCCTCCTCCGCCTCC
TCGGAGTGGCAGGACGAGCGGCCCTTGGCGTGGAGGTGGAGCCGCGCGTGGCCGCGGGAG
TAGGAGGAGCTGTCGTCCTCCAGGTAGGTGGTCCAGCCGGACTGGCAGCCGCTGCTGCAC
TCGGAGCTCGCCGCAGCGGCCATGACCGCGTCCTCCCCCGTCATCTCCTCGCCACGGACG
CACGTACGCTGGCTGGTACGCCACTCGCTATCTAATACTCCTACTACTGCACTGATGAGC
GAGCTGCTCCCGAGCTAGCAGCAGTACGCGAGTGTTAGCGCGTACTAAGTAGAGGGGGCG
GGGGGAGGCGGCCCCGCGAGTCTGCGACGGGAGTAAAACGTGATCTCGGTGATAGGTCGG
GGTTGTGGGTGATCCATCCATCCATCCAGCCAGCCAGCGTTGGCGACGGAGGGGAGCGGG
AAGCGAGGCATCACGTGGGGTGGAGTACAGCCAGGCGCGCGGCAACGGGGGGGTGGGACG
GGAGGCGGTACTGTTGCGTGGTCCGCGCGGGCGACTCAATCCTTCCCGTGACGGGGAGCA
AGCGCGCGCCTCCACTTGCCGGCTTAAACTCCGCACTCCTCTCCGTCCTCTGGCTTGTGC
CTGGCGCGTTGTGGATGCTGGGCTGGATCGGTGTTTCCACAGTGCCGAGGTTGTCCTGCG
TCGCACGGAAGCACGGTGGATGTTGCCCCGTTTCGTCTCGCCCGCGCGACGGGTGCGAAC
TGGCAACTTTTTTTTGTGTGCCTGGTAGAGAATTAGTTGATGGCCTTCTGTTTCTGAGCG
ATGATGCTGGCTGCATGAAGATGCCTGACTGCACAACAGATGGTGGACTGTGTGAGGTTT
GTGGGGAGTGTTAGAAAACAAGTCCAGTAGGGTTGACGTGATTGGATCTTAAGCCTAACC
ATTAGACCACCTAATTGCATAGATGAGAGAGATGGGTTATGATCTTACCATCAATGGAAG
CAGTTATTGGTGTAGGCGATGCGAAGTCCCGTGATTGCTCGATCCATGCGTTATGTAGGC
TCGGAGTAGACGATAGCAGCGGGTAGCGGCGTCCCTCCGGGCGCCACTCACATTGTCTTT
AAACATGGGCATAACTTGAAGTTGATCTTCCTGTCGCTGCAGCGCTCTTCGAGACCGGTT
AGGGTTTTCGGATATGGGAAGCAGGAGTAAACCGTATGTGAATTAGCCTCTCGTAGGTGC
CGGTTGTTTCTCCATCTAGTAATGTGCGCTCGCAAGAAGGGACCAAAACCATTGTTGGTT
AGGTCGCCCTTGATCAGGACACATTAGTTGTGACAAGGGCGTTAATACTTATCCTTTATG
TTTATCCTTTCAGCCCGTTAGGCCTTGATCAAATACCAAAATTCTCCCTCTCTATCGTTA
GGCTTAATAACTTTTGTCAATTCTACATAGGAATGATATACCAGAGTAAGGTGTTACAAC
AAGAAATGAAGTGCCATTGAACCATAATATTCATAGCACACATCCTATTTCAATGTGCAA
TACATCTTACTTTAGGGGGAGAGGTTTATTTTTATTGTCCTATAATTCCAGAATCAAGAG
CCTTCCAATAATCCCATGCCGGCTACATGCTCATGAAATATATTGGGTGGCAAGTTTTTA
GTAAGCGGGTCCGCAAGCATACGTGTCACACTGATATGCTTAACATTAATTGTGTGATCC
TCGATTCTATGTTGAACAACACCATACTTTAGGTCAATGTGCTTGGCAACAACACTTGAC
TTGTTATTCGCATAGAAAACTGTGGGTTCATTATCGCAGTACAATGTGAGCGGTTTGAAA
ATGTTGTCAACCACTTCAAGTCTGGGAAGGAAATTCTTTACCATTAAACGTGCCAAATGG
TAAAACATGCTATAAACTCTGCTTGCATCGTAGATGAGACAACTATCGTGGAGTGGAGTA
CAGCCAGGCGGCAACGGCCGGGGGGGGGGGGGGGCGGGG