Contig Data
morexGenes
Links



Map Locations of contig_48305 (6705 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_48305

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_64049 1 240 bp AK372888 Not available Available None
MLOC_64050 1 1979 bp AK371230 Available Available None
MLOC_64048 1 253 bp MLOC_64048.1 Available Available LOC_Os06g40360.1, FRAME:+3, EVALUE:2e-18, 13106.m04195 protein OsFBL30 - F-box domain and LRR containing protein, expressed





CDS Structure of MLOC_64049






CDS Structure of MLOC_64050






CDS Structure of MLOC_64048






Contig Sequence (6705 bp)

>contig_48305 6705 assembly3_WGSMorex_rbca.fasta
CGCGCCTCCGAGATCAAGCGGGCCCATGCCCACGCCGTGCCAGACCTCAACCAGGTCTTC
GTCTGCGAGGATGAGGACGAGGACGAGGCCGGGGCCGAGGCAGCCTCCGCGCGCCCGGGC
CGCTCTGAGAGGACCCTCGAGGGCGAGGTCGCCACGGACGTCTCCCTAACCGCGGCGCCC
GCTGGTCACCGACAAGGGCCTCGTCACCGTCGCTCAGGGCTGCCCGGATTTAAAGATGCT
CACCATTGAATCATGTTCTGGCGGTGCCAACGAAGGACTCAAGGCCATCGGCAGGTACTG
CTCCAAGCTGCAGGCCATGAACATCAAGAACTGTGCGTATGTTGGTGACCAGGGAGTGTC
TGGTCTCATCTGCTCCGCGCAGCCTCGCTTGGCAAGGTCTGACTTTAGAGTTTGAGCATC
ACTGATGCTTCTCTTGCTGTGATTAGGTACTACGGAAAGGCGATCACAAACCTCACCCTC
ACTCGCCTGTCATCGGTCGGCGAGAGGGGTTTTTGGGTGATGGAAAACGCCCTTGGCCTA
CAGAAGCTGATGTATGAGCATCACCTCCTGCTCAGGAGTCATCGAGCTGGCACTTGTTTC
CATTGCCAAGNNNNNNCCGAGCTTGAAGCAGCTTTACCTCAGGAAGTACAGCAAAATTTC
GGATGGTCCTCTCAAGGATTTCGCAGAAGCATCCAAGGTTTTGGAGAATTTGCAGATTGA
GGAATGCAACAGGGTTACTCTCACAGGCATCCTTTCTTTCCTCCTGAACTGCAGCCCAAA
GTTCAAGGCTCTCTCTTTGGTTAAGTGTACTGGTATCAAGGACATTTGCTCTACACTTGC
ACAACTCCCCGTTTGCAAATCACTTCGGTCCCTTAACATGTTTTTTGGCTGGATGGTTTT
GTGCTCTGCTCCATACAGTCCAAGACTGAGGCAGCGTTCCCACAGGCGAAGGGACAGCAA
GCAGAGAGCCGAGCAGAAGCAAAGATGAGACGAACCCAAGGTCTACAATGCCGGATCTCA
TAGCAAAGAGGTAATATTACAATTTATACATCACAAGTTCAGTACCTCTATAGTAGTACT
CCGCATCACAAGTTTCACATCAAGAACGTCCATCTTTGCGCACCGTGTAGCATCTTCTAC
CTGAACCAGAATTCAGCGCCACAAACACATTCAGTCAGACCAAGAGCAGCTTCTTTTTTG
TCTGAAACAAGACCAAGAGCAGTTCTTAATCTCTACGCTATTTCTCATGCTCTCGGTGAC
GTGATCCATGCCGCGCAGCCCGTTTGTTGTGGATCGTTGTGTGGGTTTCAACAGATGAAA
ATTGCAACAGAAACTGTTCAGGGTACCTCTGTTGTTACCGACCTGCTGTGACTGAACTGC
AACCGTCCCATGGAGAAACCCCAGATTTGTAGACTGCTACATAGTACATCTATCAATAAA
TATCCATTTGCGGATGAATGAGAGGATTATTTTAGGTGAAAATGATGGTCGTTCAGTTCA
TGATTGATCCCGCTATAGCTGCTGTAATATTTCAGGTTTAGTTTGAAGAATGAATTTATG
TTATCAGTGATCTTTAACTAGTAAGTACAGTACTTAGTATACTATCATGTTTGCAACACT
GTTGGTGGCGACTTTCATAGCCTTCAGTTTGGCAGAACTGCAGATCTCATCAGTCGCCAC
CAACAGTGTTGCAAATTGTAAAAGTGTACACATTGTAACGTGTGTTGTAGTCACTCCTAC
TTTGTAGGATCTAGAGTGTTAGTCGCATGCGTGCCACAATTGTAGGGGCTCTTGACCATA
TATACTTGTACTCCGTAACAGATTGAATTATGAAGGGAAACTATTCAATCTAACTTCTGC
AGAACCAACCATAACTGATCAAGGACACGCACCAACCACAAAAAGGTCCCCCACTCCAAC
TCAAAATAATACATCTATGCAACTTACTTCTCAAACTAAGCAGGAATGCAGGATACAACC
ACAGCTCTTCAAACAAGAACCTTAATTATGACTGTCAACCACTCTACCTTTCCCCTTCTC
ACAAGTCACAAGGGAAACAAGAACACAGACCGATCCATCAGTCAGCCATACGGCGACTCA
GGATCACACGTAGTTGTAGAGACTATGCAATGAACAAGAAAGGAGTAACAAAAAGAGAGA
ACAGATTTTTCATTCTTCGATAAAGGAGAACACAGATTTTTCATAGAGGAAAAACAGAGA
GCATGGCTTGATACATCTTGATCTGCAGCTTAAGGAGGATATAAGAGTACAACCACCGTT
CTTAGCGTCTCAAAAAAGGCAACCAAAAACACATAGACCGATCCATGGATGGATCCAGCA
GTTAACCATGCAGCAACTTAGCATCACACACACGCAGCAGCAGTTCATACATGCACAAAT
ACGGCATGTGATTAAACAGTACACACCTATATGCAGCAACTTGGGGGCCATGCCTGCACG
TATAGCAGCAGCAGCAGCAGCAGCAGTAGCACACACACATACACACTCCTTCATGCATAT
GCACGTATATGTAGTAGAGGTTCGGTTCATGGAGGGTTCGTTGGAGGCTGGGAGGAAAAA
GTTTCAGAGGCCACCGTAGCGGACGTCGGAGAGCTTGGACTTGAGCCACTTGAAGCTGCC
ACGGACGGAGGACTTGAGCCGGGCCTGCGAGGCGAACACGTTGTACGACGCCACCCGCCG
CCGCCGCTTCGCCTCCGGGTCGTCGCCGGCGCTGGGGCCGTTGAAGCTGTACGACTTGAC
CGCCGTGCCACCGCCGCCACGGCCCACGTCCTCGTAGTCGTACCCGCCGCCGCACCCGTA
GTACGCCGCCGCGTGCTCGTGCGGCACCGATCTGCACTTCTCCATGGCGACCGGCGAGCT
TGTTGGTGGTGTGCTTGTGGTTGCGGGTGTAGAGTGTGAAGGAGAGGAAAGGGTGCCGGG
GGCAGCTGGGTGATGAGGGCTGCTGGCAGTGGTGTTATAATTGAGCTAGCTGAAGGAGGT
GGGCTCAAGCTTGATTTATCAATTAGCCAGGTGAATGTGCAGGGAGCACCTCGTGTTGAG
TGGCTAGCCAAAAGCAGGTCCCTGCTGCTTCTCTTTTCTGACCGCAAAGCAGAAATGCAC
GGTGGCCTAATGGCTTTTTCATCACCAATTATTTGTCTGGTGCTTTTTACTCCCTTTTGA
ATTTTCTGAGCAGAAAGGATAGAGTGATAGATTTTAATCCAAAATGATGTGTCCTCTATA
TCATTTCACCTCGAGACCTTATCGTTGATAGTCAACTTTCTATTTGCTAACAACCAACTT
TCTACTCCCTTCGTCCGGAAATACTTGTCCTAAAAATAGATATATTGAATGTATCTATAA
CTAAAATAAGTCTAGATTCATCCATTCCTAGGACAGGTATTTCCGAAGGGAGGGAGTATT
TGCTAACAACCATGCCATGTATCATACACACTACTCTAATGATGTTTGTTATTTCTGGTC
TATTTGCTTCGACGAAACCTCTGTATCCTTTTGGCTTTTTAGGATTATTGATTAATATGC
TTGTTGTATCTCATACAAATGATTTGTTTTGTCGGTGTCATACGAAAGATTCAATTGCAC
TATATTTGAGAGGTCAAATTACATTGGCCCAAACCCCATGAAAATTTAATATATTTTTTT
ACGAAACATATTATATATTATATATTTGTGTTTCTCTTTTTTGATAAAGGGTGGATTTTA
TTATATTTGTGTTTCTCTTTTTTGATAAAGGGTGGATTTTATTATATTTGTGTTTCTCTA
TGATGAAATTAGACAATTTATATTTTATATTTGTGTATTTTCAATTTCAACACAACATGT
TTTTAATTCTCATCTGTCTCGTTGTGCTTGTATTTTAGAAATCCTATTATCCACAGTAGT
TTTCACATGTGATCTAATTTCTTGTGTCAAACACTAGAATTTTACAAAGGTACAAACGTA
TAAATTACATTTATTTATCAATAAATTTATATTCAAGTCTTGTTGAAGCCTACTTTCCAC
AATAGATGTCTAAACGCCGGGTCCACAAATTGTATGAACAAGGTGTTTCATTGATTAACA
AGATAAATATATGCCTTTTAAAGAAAGGCGGAGAAAGAACTCTCGGATTGCACTAGTGTT
CATGAGCGAATTCATGCCTAGTCTCCTAGATTTTTTGAAAAAAAAAACACAACTTATTAA
AGAAACAATTTATATAATCCCATGGGCTGATAAAGCACGGTGAGCATTTTTTTTCATTGT
CGAATTTAATCATCTACTCTATTTTTTTGTGGCTATATTCCCTTGTTCCACCAAGGACAG
TACAACAAATTAACCAGATTTTTTTTCATCATGTTTGATTCATGGTCACATATTGGAAAA
CTTAATTACCACAAAACAGATCATATTTTTGATACATTCAGGCGTACCTACAATGGGTTT
CCCGCTGGTGCTACACTCGTTCTCCCCTTTCCCATGTCCTTCTAGCCTCATTCTGGGTTG
GAACTGATGTATTTTCGTTATTCAATTATTGCAAAGGGGCGATGATCGGTCCAAAAACTA
TTCTTGTATTTTCGAGCTCAAAGCATTCGCCATACTCCCAAGTCCAAAACTCTAACGCTA
GAAAGTACAAAGAAACCCAAGTAAATCATATCTCATAAAATTCATTTGTTATGTGATCAT
GAACCAAAAAAACCACGCAGGACTTCTTTTCTTTGTAGGATTTATTTAATCATCTTCCTT
TTTTTTGTTTTCTTTGAAACTCACCGCTCCATGGAATGCGCAATGAAAGTTGTTCCTCTC
ACAACGAGCAAAGTAAAAAAAAAAAAAAAACTCGGCATCGCACGGAGCTCTACTATCCCC
ACGAGAATGTATATAGTACGTACCTAAATATAAGACATTTTTTGCAGTTCAAATATGGAG
GTGCTTCTTTCGAGCCTGAAGCGTTCCTGGCACGGTTAACTCCAGATTTCCCACGCTGAT
AAAAACACGAAAAGAATCCAGGAAACTTGGATGTTCCTCTAGACGCATCCGCTAGACAGT
AGTGCAATTGAAAAGGCGTTCGGCGATCATGCCCGTGGAGCCCGGGGCCGTTTGCTACTA
ATAAATAAAGTCGATGAAACTTGACGACGGGAGCATCCCCTGCCTACAGGGTCGAGGAAA
TGATGGCGCGTTGTAGGGGGGGTGTGGGTTGGGGTTGGGGTGGGGGCGGCCCTCACCCGC
CCGTCTGGCCCACGCGTGCTGCTTTTCCTTTCCCTTGGCCAAATCCCGAGCCCGGATCAT
CTGGTGGTCCTGATGAGTAGACTAGAGATCAATCGATGGGAAGAGAGGTTTACTGGGACG
CCGGGGTTAAAGTGGCCGGAACGCAAAGGCGGCCGGAACGCAAAGACGCCGGGGTTTCTG
GCATAGTAATAAACTACCGCCGGAAATCCCCGTCGATCGGCGACGGATCTCGAACCGGCC
AGCGGTGAACCCGTTGCTCGAGCCGGCCGACCCGACGGCGACGCGTCCAGATCCAATCCG
AGTCCAGTCGAGCAGGCCCGGGCCACCATCATGTCAGATGGTGGCATGGTGCGGTGGCGC
TCTAGACACCTCCCACTCTGCTGCCCTGCCCCCCGGCGATTCGACCGGCCGGCCCCGGCC
CCGGCCCCCACGCCCACTCGCTTTCTTCCTCGTAGCATCGTTTCCGGTCGATCCATCCAT
CACCAGCGCCGTGATCGCACCACCACTGCTGCCACTACGGTGTTGCCGCTGCCGCCGTGT
GATGCCGTGGCCTCGTCTGGCCGTCGTCACCTGCTCTGCTCTGCTCTGCTTGGCGCGTTC
CTCCGCACAGCCGTCGTCGAGGCTGCCGCGCACGGCCGTGGGAACGCCGCCTCCGACATG
TATGCATGTATAGATTCCTGCTCCTGCTTGGATGGATCGTGCCAAGTCGGCGTCGCCTGG
TCTGTTGTTCTGGTCCACGTCGTGGGCGGTCTGGTCGGGGAGAGGGTTCGTGGGTCGACC
GATCTGGACGCACCTCCTGCGCTGCATCGAGTGGGAGGAATATGTTGCTGTCAGCCCTAT
TCTATGGTTAAGGTGGCCGACGTGTACGTCCAATCTAATCTTCTTTATAATAACACTAGC
AAAAAAGCCCGTGCGTTGCAACGGGAAAGAAAATAACACACATTTTTAACCCAATAACCA
CAACTCAAGACCTTAATAGGTCCATGTCTTTTAGTTTCACATGGCATCACATGTCTGTTC
CCGACAATGACCTCAGTGCTCACACAACGAAAACATGTTTGAATGTGGTTCGAAGGTTTG
TCTCTCCCTCCCTCTCTCTCCTCGAGTAAATAACCATATGTTTGACACGATAAAAGATCA
TCTTGATAACAGGACAAAAAAGATCTGATAATTGTATCTGGCTTAAGCATTATTATGAAC
AGACTTGCATTAGAAAAATAACATTAAATTCAATTAGTTGGTCTCTGGTACTGCATATCC
AAATTATACAAGTGAATTGTAGCCACATAGATTGACTGATAAAGCATTTTAATTACAACG
TCGTATAATTCTTGTGATCTAAAGTGTTAGAATTTAATTAATTATGTAATTAATTAAATA
ATCCCTACTTGTAACCGCACATGGATCTCTCCCACGATGCGGAACCGACATATCCTTCCT
GGAGCGTCGCCTCCAGGAACCGCCTTTCCCCTGGCATATAAGTGT