Contig Data
morexGenes
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Map Locations of contig_48276 (4896 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_48276

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_64016 1 1531 bp MLOC_64016.1 Available Available LOC_Os07g44780.1, FRAME:-2, EVALUE:1e-135, 13107.m04714 protein GDSL-like lipase/acylhydrolase, putative, expressed
MLOC_64015 1 571 bp MLOC_64015.1 Available Available None
MLOC_64017 2 1073 bp AK375707 Available Available None





CDS Structure of MLOC_64016






CDS Structure of MLOC_64015






CDS Structure of MLOC_64017






Contig Sequence (4896 bp)

>contig_48276 4896 assembly3_WGSMorex_rbca.fasta
TAATGACCCATTACCCTTGTAAACTTGGAGATAATTACATTCCTACCACCGTCACCCTCC
TCTTTTTAAAAAAACCAGAGGACAGACAGGTCATTATGCAATGTAAAACCTGGAATACAG
TTTATATAAACTGGCCTTCAAACATGATTACCTAGATTATTTTTATAAACCANNNNNTAT
AATCTATCTTCATAATCCAGATTANNNTAATCTATTATGGTTCCAAACAGGGCTTAAAAT
TGGTCAGCCTAGTTTAAGTTGCTTTGCTCGTTTGGTATGTTCAATTGGTTCCCATTTCGT
CGCAACAAGTGACAAGTATAGATTATTTCAGGCGTCGAGGAGACACACCAACCAAGAATG
TCGACTGCAAATCAATCTATGGTTGGATGGTTATGTGGATAGACGTAATCCTAGCCCACC
AGTGTCAAGTCATGATACTAGCATTTATTATTAGACCTATTTAGAATTTTAACAATGCAC
GTTCAGTAGAGAGGAAACGTTTACATTGACTATGATGCGTATATGTCAATCTCAGTATGA
TATGCTGATTGATTTTTTCGGAGGTTCTTATAAAGCTAGATTGTGCGTGTGTGCTGATAG
GGATTGGTGAATGTGTATATATAAGCGTATGCGTATGTATTGTGTTGGAAAACAAATAAT
GTCAATTCAAATCAAATGCTGATTTTATTTTTTGCGGCCAGATGGTGATATGATCCTGTG
GTTTGGCAGCAGCAACTCGTAGATACGGTACATGTACAGTACGCAGGCCTAGCAGTAACG
GTTGCATGTGGACATGATGGGCGGCGCGGCGAACGGGCCGTCGAGCACCCCGCGGGCCAT
GATCTTGTACGCGGCCTCTGTCATGTGCAGGCCGTCAAACGACACGTACGTCGACGGGTC
CGGGCACGGTACCGCCGCCGGCCCGGCGTCCAAAACGGGGTAGCACGCCTTCAGCACGGT
CTCCCCGCCGAACCCGTTCTCCGCCGGCTTGGTGATGAAGGCGAGCACGTCGTCGTAGGT
GTTGACGTAGGTGATGGACACGCCTGGGTGGTCGCGGCGCAGCTCCTCGAGCTTGGCTTT
CAGCATGTGGTTGTGGAGGAGGACGAGGTCGTTGAGCCACCGGAGGCAGCCCGTGGCAGG
GTCGCGGTCGTCGCCGGGGAAGAGGAAGAGGAACCGCGGGGTGCACCCCAGCGGGAAGAT
GCCCGGAACGTACATGGTCTTGGCGCCCAGCTCGATCAGGGCCTCGATGGAGAGAGCGAT
GGAGCTGATGACCTCGGGCACGAGGGGTCTGACCCATTCGAGTGTCTTGTTCTGGAAGAA
GGGGTGGTTGTAGTCGTTGGCGCCGATCTCCCCCACCAGGAACAACGAGCTCGCCATCAC
CTCCTTCCTCTCTGCACGGCCGTGATGTGATGATGTTTTCACTTGGTGAGGAGTGCGTAA
GTAGCCATGGCGTCTAATTGCACTGACTTTGTCCTACCCGTAAGTACGGTACGTTACCTT
GGTTCGTGGAGCCGAGAATGGCGAGCAGTTTCTTGAACAAGCCGATCTGCACGTCGAGGG
AGTACGGGGGGATCGGGGGCAACTGGTCGACGCTGAGGTTCTTCTTAATGAAGAACTCCT
GGCTCAGCGCCGTGGCGGCCGCCACAGCGAAATTGGCACCGTACCGGAACTTCTCGGCCG
GCGACTTCCCGGCTGCCGCCTGCAGGTATGCCGGCCAGTACGGGAACCCCAGCCTCTCCA
CTGCATGTATACATATCCATTAGTATCCTACTACTAAGATTGGTAGTGGTAACAATTAAG
CACGTCACCCAAGCACTTACCGATGAAGTCGACGACGAGGCGGCCGTCGGACCAGCGGCC
GGTGGGGCGGCCGAAGAAGGTCTCGCCGTAGGGCAACGCCAGGACGGGTCCCGACGCATT
GGCGTAGTGGACGACGAAGTTGCCGGTGTCGATCAGGGAGTCGCCGAAGCTGAACAGACG
CTTGTAGCACCTGCTCCGGTTCGCCGGCGCAGGCGACGCATACGCCGTCGTGGCCACAGA
CAGAGCAAGGAACGCGGCCACCAGGAGCTGCAGAGGCAGAGCCGACGCCTCAGCCATTGT
GGTGGATGGATAAAAAGTGATGGTTCTGATCTCGAGCTAGCTATATATTGCCTCACCCAG
TTCTGCCGCTGGCCTGCAGCCCGGACTTGCAGCCGGAGCTATATGTAATACGCACGCAGC
TAGCTTATCTTATCTCCATGATGATTATTTGAAAATAAATTCCAACAGTGATGTGGCACT
GGGGTAGGAGATAACAGCTAGCAAATCGGAACTCGTGTCAAACGAGGCAATGGAGTAACG
AGATTTCAAGTCGAGGAATGGATTGATCGACTGTTGGGGTAGTTGACTTGCACTAAACTT
GTATGGTAAACGTGCCTTGCGTACACGCAGGGCCAATATCGGTTATTGGATAACATATTC
ATTGTCGGCAACTGCATTTCGGCACGGTCAATGCATGGAATTCTATCAAGGCAATTAAGC
CTCAAGATAATTTGTCAACTTTCTGTCGAAGATGCGGTAGAGAGCGGATGCGTGCGTTCA
TTTGCAGCGAGCACGTTACAAATACCCTATCTATGAACGCCAGTAGTGATCAACATACTG
GTAGTATCCTGCTTCCACATGCCATAAGTGAGGCACATAGTAGCGGCGTTCGCCTACTCG
CTGCTGGTAAGCACTTACCAGACGCATCATACTGGTGATGTGCCAACTGAACACGGCTAG
TGGGCACTTACGAACGCGGCTAGTAAGTGAATCCTGAACTAGTGATCAAGAGGAGGTAAA
AACACGAACTCGATTTGGTGTGTCATTCACGGTGACTGATAGGTCATATATGTAAGAGAA
CAAGAGGTCTCGTGTCACCATGCCTTTGGGGATGAGATTAAAGATTGCACCTCCACCTCT
TGCCATACATGGACATTTGAAATTTATATTACCCGAAGGGACATGGCCGACAGTGTTTTT
CATCAAGAAGATACAAAACAGTGACATAAAAGGCAAAAACTGAAAAAATACAGGGATGGA
GAGAAATTAGATGCTCGAGAGGAGGAAGGAACGAAACCGGAGGAGCTGCTCATTCGCCCC
GGCCTCAAATTGTCTCGAATCTCGACCACAACAACGTGTCTATGGTCGTGCATCGGAGAA
CATCTCCAACCCCACAGACGACGGAGTTGAAAAAACAGTTTTGCTAAGTCTTAGTCGACT
GAGACTTCCTTATGTCTCAGTCGACGCTATAATCCGTTGATCTTGTATGGAGATTTGTGC
AAAGGCTTTTTTAGCTTTTTACATACTATATCACTTGACTAAGACTTGATTAAGTCTAAG
TCGACTGAGACCTAGTCACATCCTTGAAAAAAAACATCATTTCTAGCCTTGCAAACATGC
CAGAGAAGGAATTGGGCCACACCCAAATATTGTACCAAATATAATTCCTTTTGCGGTGAA
TACAATATAGTACTTGATATCTCCAGCTCATGAGGGTTCAAATCCAGATGCTTGCATTAT
TTCTGGATTTATTTCAGCAATTTCGCCGATACGGACGTTCCCGTCGACGACGAGGCGTCT
ACGATGACTTTGTAAATCTCAAGATAATATGTCGGTCCAGTCTTTTGGAGGTGCTCCAGT
ATATGAGCGATTGCGTTTGTACTGTATTCAAAAAAATAATATAATATTTGATTTATTTGG
AAATATTTTTTTTACCGGGGAAATAGATTTATTCAGCGCACCATGTGAAGCTCGCAACAG
AATGTAAACCCAATAAAATCCCAAGCAAATGAAATGGACTTGTAGCACATGATGTACTGT
ATAGGTGCCCAGCTAGCTTAGCTTGCATGTGGACATGATGGACGGCTTGGCGAAGGGGCC
GTGGAGCATCCCGCGGGCCATGATCTTGTACACCGCCTCCGTCATGTGCAGGCCGTCCCA
CGACACGTACCTCGACGGGTCCGGGCACGGCACCACCCCCGGGTCCGAGCAGTGGAGGGT
CAGGTTGGCGTTGTACGGCCCGCCGCCGCCGCAGCACGCGTGAAGCACCGTCCCCGGTGC
GAACCCGTTCGCCGCCGGCCTGGTGATCAGGCTGAGCACCTCGTTGTAGTAGTCCACGTA
GGTGATGGACACGCCGGGGTGGGCGCGGGCCAGCTTGCGGAGCCTGCCCTTGAGCATGCG
GTTGTGGTCGGCGGTGAGGCCGTTGAGCCACCGGAGGCAGCCGGCGGAGTCGTAGCCGCC
GGGCTCGCCGCCGCGGTAGAAGTAGAGGTACCGCGGCACGCAGCCCAGCGGGAAGATGCC
CGGCACGTAGACGTTCTTGGCGCCCAGCTTGACGAGGGCCTCCACGGAGAGCGCGATGGA
CCTGATCACCCGGGGCACCAGCGGCCGCACGAACCCGAGCGTCCTGTTCTGAAACAAGGG
GTGGTTGTAGTCGTTGGCGCCGATCTCCCCCACCAGGAACAGCGAGCTCGCCATGATCTC
CCGCCGCTCGACGTCGGTGGAGGCGATCGCGGCGAGCACTTTCTTGAACCACCCGATCTG
GATGCCCAGGGAGTAGGGGGTGATCTGGTCCACGTTGAGCCGCTTCTTCCTGAAGAGGAG
CTGGTTGAGCGCTGTCCCGCTCGCCACTGCGAAATTGGCGCCGTAGCGGAAGTCACCCTT
CGTCGCCGGCGACTTGGCCTGCAGGTACGCCGGCCAGTACGGGAACCCCAGCCTCTCCAC
TGCATGCACGTACGTGCTCACATCAATCATGCATGTCTATGTACACGTGCAACTGCTATA
ACATGCATGTGAACTGTGAAGTGAGGATTATTTACTAAGCGTGCGTGCACGTACCGATGA
AGTCGACGATGAGGCGGCCGTCGGACCAGCGGCCGG