Contig Data
morexGenes
Links



Map Locations of contig_48181 (3562 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_48181

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_63957 1 1409 bp MLOC_63957.1 Available Available None





CDS Structure of MLOC_63957






Contig Sequence (3562 bp)

>contig_48181 3562 assembly3_WGSMorex_rbca.fasta
TGTGTGTGTGTGTGTGTGGACGGAGGGAGTAAGACGTTTTAGGTTTGAACAGATGCCTAA
ATAAATCGTACGCTTGAAAATTTGGCTTTAAGTGCGAGACCAAATCAGCAGCTCCAGCAG
ACGCGTTAAAATCGCACGCGCTAAAAACTATTCCGTGCGCCGAATAAAACCGCATCACAG
GCTGCATTTTTCTATCGTCCGCTACCGCACGCTGAACAGTGACTCGCCCATATGAATGCC
CACCAATCGCCGGATCTGAAAGCTCCGCTCGCCCACGCGACTTCCCCATCCTCTCCAGCG
ACCTGTCGGCGCTTCCTCCCGCCATTCCTCACCGCACGCGTCGCTTCCCCCTCTTCCTCG
ATGGCCGCCGCTGCTTCCTTCATCGCGGCCGCTCCTGGAGTGCCTTGTTCCGCCGATAAT
CAGCGCCCGACGGAGGTTTGCAGCTCTGTGCCCACAAGGTGTTTGACAAAACGCTTGAAG
GTATATATTGCTACTAAACTTCATTGTAGATGATTTTTGTAGATGTTTGTAGTTTTAAAT
TTTAGTTTGAATTCAAATTTATAGATGAGTTCTTCTCATATTTTTTTATGAAGAATTTGA
TCCTCAAGAGGAGAAGGACCTAACAATGGTCATAGCTATACACATCAACAAAAAAATAAA
AGCACGGTGGTTTGGTTTTTGGTCGTTGAAAATTATGAAGAGATATGATGGATGTCCAAA
CAGATTGATAAGAAACTATTTTGCAGATATTCTCGCATACCGCGAATCGGTGAAGGCAAG
ACCTCAGATTCCTTTCTCCCTTCTTTTTTGTTGTTTCGTTTGCTCACATGATTCATCCAT
CTGACAGCGAGTGCCTCTGTTTTTCTGTAGGCCTACTCTGTCTTTCCACTCACAGGAGAA
GGTGAGAAGAAAATGGCCGACGCCGCAGACGGCAACGACTGGGAGCTCCCGTCGCCCAGC
ACTTCAATCTGCCGGCAGAGGAATCGCCTGCCGATCTTCTAAACTGTGGACTCCAAAAGT
TGGAATCCACCACCCCTGTCATGCCGCCGCTGGATGGTCTCGGTCTCGGTCTCGGCATCC
CCTGCGAGACGGAGGCGCTGGACTGTAATAACCAGCCGACGATGCCAAGGATGATGGCAT
TGCCGTCGGCTCCGCTGCAGCTTGCCCACCTGCTCCGGTGGCAGCGCCGACACCCAGGGC
CCCTTGCAAGCGTGGTAGAAGAAGACCTTCTCGTTTCTGCGCGGCAAAGCCAGTGAGTCC
CTCACCTTTTGCTTCGTCTGCAGCTCAGGCCAGGTCTGTTTTCTGCAAGTGCATTCAACA
GAAGTAAAACCTCTGTTTTGTGCAAGTGAAAGAATGCCATTTGCCTAGTCGAATAGACCG
TGCTGTCATTTTGTAGCTAGTAGGAGTAGATCAGGAGGGAGTGCTTATGGATTAACACTG
AACTGGTTTCGATGAATTTTTGCAGTGCAACCAAGAGTTCCATGCAGCTAACCCAACACC
CATTGAAATGAGTTAAACATTAAATCCATGGTAATGGATCAGCAAATAAAGTGGCTAGTC
ATGTATGCATATCTGCTGCATCATACTTGTTCTACCTATATGCTTGCTTATGAATAACCT
GGGAAATTACTTTTGCTTGCTGCAAGTTGCAACTATTGTGCACTCGTTATAAATTCAGAA
CCTATGACATCAATGTTTGTCATGGTTAATTATTTCAGAAGATAAGCTTCCCGGCGAGCA
AGACACTTGGTCAGGTGAAAGTCAGCATGCTTGGTGGAAGCCCTCTCGCTCAGCAGGGGG
AAATAACTACATAAGTTGCACAATATGCTGATCATGATGACGACAATGACGAAAAACTAA
GTATGGTAGCTAAGAAGTTGATGAGGATGATGAAAAGAGTGGTCAATCTTTCTGCATTGC
TGCTTACTCTGGTATGTAAGCGTACTATACTTAATTAGTAGCTAGGCAATGTAATGAACA
TGTATGGGTGAGCAGTAGTGCGTATTGTTTTGGACTAGCAGCATGCAAGTAGCATCTGGC
CAGCCAAGGTGGTTGATTCCATCTTCCTAGTATAATCAATAAATTCAGCTCTGAAATATT
GATTTCAAATGCTGTGGTGCCAATATGATAGTGAATCATCTCTATTGATGTTCAAATTGT
CCCTGAAATGCAAAATGTGCATGAATGGTGCTAATGTGCATTAACGGTGCCAATATGATA
GTGAATCTTCTCTATTGATGTTCAGATATGCGTTCTTTGGCCTGAATGCAAAAAATAGCC
TGATCTCAATACAGTTTCACTGCTCTTCGGATATACAAGTACTCCCTCCGGTCCTTTTTN
NNNNNNNNNNNAGATTTGTGTCAAGTCAAACTTTACAAAGTTTGACCAAATATATATTAA
AAAATATCAACATCCACAATACCAAATATACATTTCATGAAACTACATTTCATAATGAAT
CTAACAATATTAATTTGACATTGTGAATGTTGATACATGTTTCTATAAATTTGGTCAAAG
TAAAGATACTTTGACTTCGGACAAAGCTAATATGCAGACTAAAAAGGACCGGAGGGAGTA
CTAACTGGCTGTTTATATATCATCGTACCCGTTTGATCATTTCAGGAAGCCTGAAATCTC
AGCATTCAGGCAATGATAAAGATCCTTGGATGCATGAAAACATGGGAAACTGTAAACCAA
GCCCACTAGCCATGAGCCTAATGTATGCACCTTGAGCTGCACCCTGGTCCATCTTTTCCA
TCTGCAACCAGGTGATATCTGCAGCCAAAGAAAACAACAGCTTCTTATCATGATTTAAAA
ACTAGGGTCGGGTAGTCAGAAATCCATGCTGAGCCAAAAAAATCAGATGCCTCTTATCAC
AATTAAAAATGCATCAGATGGTCAGCATTTATGTTCAAAAAGTGGCAAAACAAAAAATCA
GCTGCTTCCCGTGCACTTGTTCAATTGCAGAGGACTGAAACATTTAAATGTTGAAATTGG
GGAAAGGTGAGACACCAAGGTCTTAAAAAGGCACCACATACACATTTGTCACGCTTGGTT
CAATTTGCGGAGCACAAGATGAAGTGGTTGCGGCTATGTAATTGGGGAAAGTTCCATCTG
AGCATCGAATCAGCTCATGGTGGGCATTTGACAGTTGACATTCAGAGATGCAGGGATGGT
TCGAGCGTACTGCAAACTGAAGCCAACACGGTCGATTTTGGGGGCAGAATATTAAAGCAA
CGAACAATGGGAAATGGGGAACACAGTGACAAGATTTAACAAAAGAGCAATAGATTGAAG
GCGAATTCAGGGATAAAGCGCTGAGATTTCCATTCCATGCTAGCGGTACCACATCGAAAC
AACACACAGCAGCGAGATGCGGCCATTCCGTTACACTCAAGACAATGAACACTGAACAAC
AACCATGGCTAGCTACGAATCCGACGGCCGCGAGGTGGATCCGACCGGAGCGGCGCGGAC
TAGCCGCCGAATCCGTAGAGGGTTCGCCCCTGCCGCTTGAGGGCGTAGACGACGTCCATG
GCGGTGACGGTCTTGCGGCGGG