| Morex x Barke POPSEQ 2013 | Oregon Wolfe POPSEQ 2013 | Morex Genome Release 2012 |
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Predicted Genes from contig_48168
| Gene ID | # CDS Predicted | Max CDS Length | Probes in Cluster | FPKM by Treatment | FPKM by Replicate | Top Rice Hit |
|---|
| MLOC_63939 |
2 |
7113 bp |
MLOC_63939.1 |
Available |
Available |
LOC_Os01g16960.1, FRAME:+2, EVALUE:0.0, 13101.m01900 protein pyruvate kinase, putative, expressed |
| MLOC_63940 |
3 |
2642 bp |
MLOC_63940.2 |
Available |
Available |
LOC_Os01g16950.1, FRAME:-3, EVALUE:4e-69, 13101.m01899 protein zinc finger, C3HC4 type domain containing protein, expressed |
CDS Structure of MLOC_63939
CDS Structure of MLOC_63940
Contig Sequence (9417 bp)
>contig_48168 9417 assembly3_WGSMorex_rbca.fasta
GGAGCGGGACCGCGGTCGCTATTGAATCAGATTTGGGGGGCTTCATGCAAATATGCGGTG
ACGTGGCGTGGGTCAAAGCTGGTCAGACGAGAAAAGGACCTCGCATGAATCACTTAACAA
ACGTATAGGACCCAGACGTGCATTTTCATAGAATAGGGACCAACTTAACACTCCTCCTAA
ACTTTAACTTTAAGGACCGCCCATGCATTTTTATCTCGAACGAGACCACCGCCGCATTAT
TACTCACCCCGCCTGCACCCGTCCTTGGTCTTGGAGAGCAAGAAGAACAGCACAGGAAAG
CAAACACTTTCCATTCCCCTCCCCTCAATCAATCCGCCGTTTGTTTATTTAACCTCGCCC
GTCCCATTCTTGGAGAGCAAGAAGAACAGCACGCCACCACCTCGCCCAAAGACACACACA
CACAGCCCTAGAAGGAATCCCCGTCCCCCGCCGACCCCTTCCCGTCCTTCACAGATCCGG
CGACCGACAAGGCATGGTGTCCAACGGAGAGCTGTCGCAGCCGCAGGCGGGGGAGTACGG
CACCGCCGTGATGCGGCGCCGGCCCAAGACCAAGATCGTTTGCACGCTCGGCCCGGCCTC
GCGCTCCGTCGATATGATCGAGAAGCTGCTGCGCGCCGGGATGTGCGTCGCCCGCTTCAA
CTTCTCCCACGGCTCCCACGAATACCACCAGGAGACGCTCGACAACCTGCACGCCGCCAT
GGAGCGCACCGGGATCCTCTGCGCCGTCATGCTCGACACCAAGGTCCCCCTACCTTGCTC
TTCTTCTTTTCCTCCGCGCCTCGCCGATCGGATCTGTGACCGCCTGTTTGCTTCTTTAAT
TTCGTTGCCTGCTCATGCTTGGTCTAGGTTTAAGGCTGGCATCTTTTCACCGTTAATTTG
TACATTTTTCCGATTAAAATATCTACATGGATTTGTAATAGCCAGGCTGCTGGTCTTCTC
TGGGTGGTCTTGTTTGGGGTTCCGTCGAGTGTTTTGTGTACTAGTACTAGTACTTTTTAT
GCCAGCGATTTGGCTATTTTTAGCCATTTCATTTTCAGGGGTCATTACTCGTCCGTGTTT
CTTCATCTTCTTTGTGGATGCGATCTCTGATTTCTTTGCTCCCTTGATTTTTTTCCCGAC
TGCTGCTTCTGCATGTTAGTACCTTGCGCATGTTACGACTATTGTAGATTTGCAGGCAAT
TAAAGCGACATATTGTAGTACACGATATTTTTGATATCCCAAGATCTACCAATCAATTGC
CTTCATTGGTCATCTAGCTTGATTTGCATGCCAACTTTGCTACCGAATGGGCCAATGTAG
TAATACCCTGTACCAGTATCCCTCAATTTCGATTCGCTAGATTGCAGTTGTCGATTTCAT
TTCTCTGTCGGGTGTGGTCCTCATGCTCCAACCAAAGTTCCTGGTATGTCAATGTGTTTT
GTTTGTTCTGGTGTGTTTGTGACTACCCTGCCAATGGAGAATGTGTATTATTCTCACCTC
GGGCAACCTAACTGAAATATGGATCAACTGCCTAAATGCTACTCCCTCCGTGCCATAATA
TAAGAACGTTTTACAAGCTGTTTTTAGCTTGCCAAACATTCTTATATTATGGGACGGAGG
GAGTAGCAAAATTAAAGAACTCAGCATAATTTCGAGTACTTTAACCTTTAGCTCAGTTAA
CACAAGAAGCCAAAGTGTAATATATATAAGCCAAAGTGTAATATACATAGCTCCTTTTTT
CTCCTCACGTTTTTGTTTTGACCTTGAAATGGTTTAGTGACGGCTCACACTTCTGAAAAC
AGTATTTTTTTTTCAAGTTACAGCTCTTGTGAATCTACTACCAACTATTATGTTGCTGCT
GCAACAAATTTTATGAATTACGTGTTTAGAATCCTTAGATTTATTTTCTCTTCTTGTTAC
CCACACAAAGATGTCCAAACAGTATCTCACTATCACATCCGAGGGGTAAGTAACTTTGCA
TGATCACTTAACATATGATCTGCATTTTATTTTATAGAATGCCCTGTTGCAGGAGTTGTC
TGCAGAAATAGTACAGTAAACTACTCCCTCCGTCCCAAAATNNNNNNNNNNNNNNNNTAC
TAGAGCTAGTACAAAGTTGTATTAAGCTTCAGACACTTATTTTGGGACGGAGGGAGTACT
TTTTAGGAGCAAATATGAGCACATTTGGATGATGAAATGATTAAACCATACTGACAGAAC
CTATGATCTGAAACAAATCTTAAGACATCACAGAGTTAACTTCAGGTCCTTAGCAACTTT
CAGTGGTTATTACTTTTTTTTATGTTGTTATTACTGGATGTGATCTCTGATATTCCTTTG
CTCCCTTGAACATTTTTTGTGATCTTCTTTCTTTTTCGCTGCTTGTGTATTTTAGTACTG
TTTTAGTAGTATGGTAAATTTTCCAGCAATTAAAGCAATAGATGGCAGAAGATATTTCTG
GTATCTGAAGATCTAGCCATTAAATGTCTGCATTGACATATAGCTTGATTTGCACGTGGA
TTTTGCAACTGACTTGATCAATGGAGCAATACCAGCTTAGCTGGACTTTGATTGGCTAGC
TTGCTGGTCTTGAGTTTGTCGGCTTGTGGTCCTTGTGCCACAGCGAGAGATTCTGCCTAT
ATTAATGTGTTATGTTTTGTTCTGTTCTGTTTTGTCACAGTGCCAATGGATAATTGTATG
CTTCTCACATTGTGCTACCAACATAATATGTTTGAATTGCCAAACATGTTAATAGTATCA
TTTTGTGAACTTTAACCTATAGCTCAGTTGAAAGAAGCCAAAGTGTAATATGTAGTTCCT
TTTAATCCTCTTGTTTGTTTTGACCTGGTAATGTTTTAGTAGTGGGCTAGTGGCCCACAC
TTTTAGAGCAGTATTTTTTTGGTTATCGTGACCAAGTTTCGGATCTACCAACAATTATTA
TGCTGCTGCTGCTACAACAAAGTTTATGACTTGCCTCATTACAGTCTACATTTTCTTCTC
TTGCGTATCACCCACACAAAGATGTACAAATAGTATCTATGTAACTGCCACATCCAAGGA
GTAAGTAATTTTGTATGATCAGCTAGCAATGTATTATGAAATTTATTTTGAATACTCAGT
TGGAGAAGTTGTCTGCAGAGAAATGTGAATGCATATTTGGATCACAAATGATTAAACTTA
ACTGGCATACGCGTAATCTGAAACAAACCTTACCTGGGATTAGTTGACCATATTCTCGAC
AATATCATAATGCATTCACATTTCTAACGGCTTTCTGGTATGTATGTTTCCTTGTCTAAG
AAAAGCATATTGTATGGAATTCCAGCAACATAACATGAGGCTCGAGCGTTTGTCGTGGCA
CACACTTGGTTTACATTACTGCTTTTGATCAAGGTGTGTAATGTATTTGGGAAAAAATGT
TATCATCATAATTGCAAATCTGGAATCCTTGTTTGGATGAAGAGAGTTGTAATATGTTTA
AAATTTTCTCTACATGTGTTGAGAGCAAACTATGACAGACCAAACATTGGATGTCAAATT
TCTGTCTCCATGATCAGCTTGATAGTCACAGAAATTAAATACAAGTGATCTTGTTTGTGG
TGTTTGTGTCTGGGTGTGTGTCAGTGATGAAATGATTATTTGTCTCTCACGTGTCATATG
GAGAACCATTTACCTCATTTTGGGTACACTTGCTTGCTTGATGGAAGCTTATTGATCAGA
TATTCATTGGTTTTCTACATTGCAGGGTCCAGAGATCCGTACTGGATTTTTGAAAGATGG
GAAGCCTATCCAGTTGAAAAAGGGCCAAGAAATTGTAATCTCCACAGATTATACCATAAA
GGGGGACGACAAGATGATATCGATGAGCTATAAGAAGCTAGCAGTTGATCTGAAGCCAGG
CAGTGTTATATTATGCGCTGATGGTACTATCACTCTTACTGTGCTTCACTGTGACAAAGA
GCAAGGTCTCGTTCGTTGCTGTTGTGAGAACACTGCTATGCTTGGTGAGAGGAAGAATGT
CAATCTTCCAGGGGTCGTTGTTGATCTCCCAACACTCACTGAAAAGGACAGGGAGGATAT
CCTTCAATGGGGTGTCCCGAACAAGATTGACATGATTGCTTTGTCGTTTGTTCGCAAGGG
TTCAGATCTTGTGGAGGTCCGGAAGGTACTTGGGGAGCATGCCAAGTCAATAATGCTGAT
GTCAAAGGTACGCAATTCTCTTTTTTTGGTATTACACTTGTGCACTTCCACCTAGCAGAT
CATTACAAGTTCACTTGAATGTGCAGGTTGAGAACCAAGAAGGAGTAGCTAACTTTGACG
ATATCCTGGCACAGTCTGATGCTTTTATGGTGGCAAGAGGTGATTTGGGAATGGAAATCC
CTGTAGAGAAGATCTTTTATGCACAGAAGGTGATGATTTTCAAGTGCAACATTCAGGGCA
AGCCAGTTGTGACTGCAACCCAGATGTTGGAGTCTATGATCAAGTCTCCTCGCCCTACCC
GAGCGGAAGCAACCGACGTGGCCAACGCAGTTCTTGATGGCACTGACTGTGTCATGCTCA
GTGGCGAGACAGCTGCCGGTGCTTATCCAGAACTGGCAGTGCAAACTATGGCCAAGATCT
GCTTGCAGGCTGAGTCATGCGTGGACTATTCTGCTGTTTTTAAATCAATCATGTCATCAG
CCCCGATTCCCATGAGCCCATTGGAGAGCCTTGCCTCATCAGCTGTCCGCACAGCGAACT
CAGCTAAGGCGACGCTTATCTTGGTACTGACCAGGGGAGGAACAACTGCAAGGCTTGTAG
CCAAGTATAGGCCATCCATGCCGATACTGTCTGTCGTGGTTCCTGAGCTCAAGACAGTCG
AGTTTGATTGGATCTGCAGCGACGAGGGGCCTGCCAGGCAAAGCCTTATCGTGAGGGGCG
TGATCCCAATGCTGAGTGCTGGCACTGCGAAGGCGTTTGACAGTGAAGCCACGGAAGAGG
CACTGAGGTTTGCCGTGAAGAGCGCCAAGGAGACGGGGCTTTGCAACGCTGGTGAGTCCA
TTGTGGCCCTTCACCGCATCGGGAATGCATCTGTCATCAAGCTCTTGACCGTGTAAGCTT
AGTGGCAGCGGCAACGCAACACCATTTTGCCTGGGGATTTTCCATTTTTGTGAGGCTACG
CATACCCACAGTAATTTGCTGCCAAGATTGCGGCAGTGCAACCTGGTTAAAACTTTGTGT
TATCAAGTTGTGGCTGTTTACTCTTTATGAGAGGGTATGGAAACACCAAAACTATTATCC
TAGCAGCTTGTTTTGCTACTGCTATAACTTGTGTAACGATTGAACTACCTGATGGTTGCT
TCACTTTTACTCCATCTGTTTGCCAGTTATTTAATTTGTTTGCGCTATATTTCCAACGTT
TGCTACTTGCTAGTTTATGGAGGTGAAGGAGGATGACACAGTATATGCGTTTGGTCAATT
ATGCTCAAGCTTGTGGTTGATCACCGCCGTGTAGAGTCTGAAAACTGATGAACATCAGTC
GTATATTTGACAAAATGTATCGAATTTAAACTGTACAACCTTTGTTTTTGTTTTTGTTTG
AATTACACCCAAATGACTGATTCACGCGAAGAAGAGACACGAGAAAAGCTCCAAATTTTG
GCGCAGCAGCAGACCCTTGCGTGAGTGGTATGTCAATGCACCCAAACGGAGCAGAGTTTT
AGTCCTCAAAGTGCCGCGAGCTGCCGCCGGAAGTCGAAGTGGAAGTGGACGACGGTGATG
TCCCCTGCGGGGAGAAGAGGCTGTTGAGCCACTGTATCGACGCCGGCAGCCGGCTCACGT
TTCCTTCAGCCCCCACATCGCCGTCTTGGCGCTCTACGGCGGCATTGCCCTCTGCCTCAT
CTCTACCATCGCCACTCTCATTGCCATGATCATCGACATTGTCGTTCACCTCACCACTGA
CATAGGTGACGTAGGTGGTGGTAGTGGTGCTCACGCTGCCGCTGCCGCTGCCGCTGCCGC
ATGAGCTCTTTGGGTCGTCGTCGGCCGGCAGCTGGAACCGACAGACCGGGCAGGAGCTGT
GCATCTCCAGCCACGGCACGATGCACTGGGAGTGGAACCTGTGCCTGCAGGGCAGCTCCC
GGGCGCGCTCGCCGGACGCGTAGTCCTCCAGGCACACCGCGCAGCTGGCCGCGTCCTCCT
CGTTGCCGCAGCCCACCACCTCTACGGTCGGCAGCGCCTCCACGGCGTCCTTCTTTGCCG
GCGGCGTGCCCTGCCGGCCCGCGTCGCTGTCGGCCAGCTGCTGCATCAGGGCGTCCAGCC
CGGGCCCAAGAAAGTAGTCCCCCAGCGCCATGCCGTGCTCCCCGAGTGGGGCGGCGGCGA
AGATGCTCCGGCCGAACGGGCTGTAGTGCTCTGCCTCGAGGCCGCCACCGGCGCCGAGGG
CGGCCGCGGACTCGAGGCGCTGCAGCTGGCGCTCCCGGATCGCCTGCAGGAGCCGCAGGA
ACGCGGTGGCGCGCCGCCGGCGTCGCGAGAAGTCGACGTTGTCCAGCTCGTCCTCTGCGG
CGGCCACGGCGTCCACAGTACGGCGGTTGCTGCGGCGGCGCCGGACGGGGTCGCCGACCA
TGCTGTCGATGATGGGGGCCCAGATGGAGATGGCGTTGTCGGCGCTAGGGTAGGTGCCGC
TGGCGTGGCCGGTGCCGGCGGCGACGCTGCTGCGGGCGGTCTCCATCTCCTCGAGGAAGC
CGCTGCCGCAATACGGGCACTTGATCTCCACCCCGGCCTCCGCCACCACGGGGCTGACAG
CCGTGGCGCACATATGGCACCAGTACCTCCGGGCGACCACCAGCTCCCCCATTGCTGTCG
ATCTCTCCCCCGTCAATGGACTGGAGCAGCTCTAATTCTTGGATTAGGCACTGATAAATC
AATCAAGAAGGGGAAGATTAGAGCTCGACACCAGCAATGGCCAAGGAACCTGAAGAATCG
GAAGCCAATGCAGGTGCAGCACCAACTTTTTGATGGATTCATGTTCTCCACCCGTAGAAG
TAGAATGCAAGCTAGCTAAGCGCATGAAGAACATGGGCCTTTTTTGCTTTTTGACATGGA
ATCGAATGATGGGATGCATATCTTTCCAGGCTCCAAAAACAACATGTACCCAACAATAAG
TCCAATCTCATAAAGAACCAAATGCTAAAACAAATTCCAATTACTAGCTATCAGGGAAAG
AAGAAACTGCATGATGAACAGAGGCGGCAAAATGACCGGGATAGACAATCAACAAGCACA
AGACCAACCAAATCCGAGGAAAATGATGAAAATCTTAAGGCATCCATGGATTGATGGATG
GTTGAAGAATAATCACCTTGGGCAGGGCATGTGGGGGGTGGGGGAGAGAACAAGGCCAGA
GGGGGGCTGGCCTGTCCACCTCCTCTATATTAGCAGTACCCTTTCCTTGGGTTAATTGCT
GTGGGCTCCTAATATATAGATATAGATAGATAGACAGACAGTGATTAAAGGCTTTGCTTG
CTCAATTATTGCCTGGGATGAGGACGCTCTGGCATTCTAATTTTAAACTGCCTTATTTCT
CCTCAAAACAAACTCCCCCTCCATTTCTGCTAAAAGTTCGGTGGCGTAGCACCTGCTTTG
GTTCCCAAACCAACCCAGATATAGGACATCCCCAAGGGTCAAGGAAAACATTTTTAGGAA
AAGAAAAAAAAAAGTTGCGAGAGCGAGCCTTCTCGCTCCCACGATCATCGAGCATGTGCA
TGTGACGGACAAATGCAGCTGGTCGGATGCACCCAACGCACCAAGCATAGCTGGGGCAGA
CAAGTTCGACGGGCACGCTATGGAGGGGATGCTCCGCCACCTGCTCTGGCACCACGCTCG
TCGTCTTCTCCTGCTCCTCCGCGCCCTCGACTGCCGTCGTCTCGCTCCTCTAGAATCGCT
TGCGAGAGGACCACGAGGCGGCCTCGTCCTTCCGAATCACGGCACGACTGCGACAGCGTC
ACAGAACAGCGACGCGACCTGGTGCAAGATGGAGATGCACGCGGCCGACGCAGACGCTCC
ACCTGCATGTGCTGTACGTGGCGAACCAGCAGCAAGATCCGGCGCGGAGGGCGCACTCGG
CGGCGGGATCTCGTCGGAGGCACTCTCCGACGGCGAGCTGTCGCGGCGCGCTCGGACGGG
CTGTGGGGCGAGCTCGTGGGACAGGCTGCAGTGGTGTGCGCGGAAGGGCTGCGGGTATAC
GTGGGGGCATGGGCACCCGGCCCGACCCGACCTGACCCAAAAATCCCGGGCCGGGCTGGG
CCTATTTGTGTCATCGGGTCCGGCTTGATCGGAAAGTTGAGTCCGATTGTCAGGCCAGAC
CGGGCTTGGGTCTATAGAAAAACAAAATTAAACCGGGGTCGGGTCAGGCTGATTGGGCCC
AGTCGGGTTTTTTTGGTCTCGGGCCAGACTTAAGCCCAACATCCAGTCCCAACGGTCGGG
TCGGGCCAGGCTCGAGCCTGGGTTTTCAGAACCGGGTTTTTTTGCCTGGCCCGAAACCCG
GCTCAACCCGAAGAATGCCCACGTATAGGTGCACGACGAGCTTGCGTGACCGAGCTCGTG
TGGTCACTGTTTTATGGGACAAGGATCGACATGTTTCTTGATGCCGGAACATTTCAGCTC
GGCATTCGTGAAGTGCATGGGTACGATTTCCGTTCGGCCTTTTGCTTTTTATGATTCGAT
GTAATTTCGGTAGCTTATTATTTGTTTAATATTACATGTAGGATGGATGCAGTTTTGATA
TTGGTAAGAAGAATACATTGATCTATTGATCTCACAAAATTTACTAGATGTTCGTGTACT
TCTATCTAGAATTAAAGGTATAGATGAGACTGAAGAAGCGACCAAAGGAAAAGCAACATC
TAATTCTTTAGCATCGAAGAAGAAAGACGTTGTAAACTCAAAAATTCACACATCAACAAC
GAAAACATAGAGAAGACCTTAATCCAACTAGTAGAAACAGTTATGGAAGTTAGACGTCTT
TTAAAATGTCTAATTGTGGTTCTTGTCTTCTTTGGTCTTGTATTCGTAGCGGAGAATTGG
TAAAAAAATCCCCTCCCCGGTGCACCGCCGGTCTTATATTCACACATACTCATCCCTTTC
AAACCCTAGTTACTCCATCGCCAAGCTGTTTTGGATTAGGAAAGACCTCTTTCGATCTAG
AGAGTTCTCGCGAGATGATTGCTTCCCCGTTGAGCGCGTAGGGCGTTATGATCCTACCCC
GACCATCTTCAAGCCTTCGGTGGAGGGGATCGGGCCGGGCTCGCGATTGTTTGCTGAGGT
GGTCAAGACCAAGATGGACAAAGGTCGTGAGCAGCATCAACCACCACGTCGCTTGGCTAA
TTGGAAGACAACGCCTGCCCAGGGAGTGCAGGCCCAACCTGTTGGAAATATGCCCTA
