morexGenes - Barley RNA-seq Database

Contig contig_48089
Source Contig contig_48089
Contig Data
|Contig Location|
|Microarray Probes|
|Predicted Genes|
|CDS Structure|
|DNA Sequence|
morexGenes
Links
Map Locations of contig_48089 (8017 bp)

Morex x Barke POPSEQ 2013	Oregon Wolfe POPSEQ 2013	Morex Genome Release 2012
	No map location	No map location
Predicted Genes from contig_48089

Gene ID	# CDS Predicted	Max CDS Length	Probes in Cluster	FPKM by Treatment	FPKM by Replicate	Top Rice Hit
MLOC_63893	10	2616 bp	MLOC_63893.1	Available	Available	LOC_Os06g44300.1, FRAME:-1, EVALUE:0.0, 13106.m04656 protein WAX2, putative, expressed
CDS Structure of MLOC_63893

Contig Sequence (8017 bp)

>contig_48089 8017 assembly3_WGSMorex_rbca.fasta
GGGGAAGGGTTGGTAGGTTTAACCATCGCGCGATCCCGACCGCCACACAAAGTGTTAAAC
GCATAATCCTAGAGGAAGGGTTGGAGACGTATCACTCACCTGCCCTTCATCTGCAACTGT
CACAATTATATTTTTTTGTGACGATGGTTCGATGAAAAACGGTGTGACCCCATAAACAAT
CACTAGCATGTTTTCGGCGAGGAAAATCGGTTTTACGTGATACAAGTGAACCGTCACTAA
AAGTGATCCGTTGTGTAGTGGTTATGTCAAAAAACCAATGGAGATCACTCATCTCATCTT
TGAGTGCCGGAGGAGGAAAAATTGTAAGGTCAAATATGTACCGAAGGACAACACTTGGGC
CCTAAAAGTCAACATCACCGAAATCGTATCCTTGGACCACGTCCGTCAACTCACCGCCCT
TTGGCTAGAGCTTGGTAATGTCAACCTTCTAGAAGGCATCGGCCATCACATATCTTGGAA
GCACACATCTAGCGGCTACTCGTAGCCTCCGCCTACATGGCTCAAATCCTGGGTGCAATC
CACACCTTCATGGAAATAATGGTTTGAAAAGCATGGCCCCCTATGAATGTCATTTTTTCA
CTTGTCTGCCATTTAAAATAGGGTTTGAACAACGAATAGGTTGGTTAAACCCGGTCGGCC
AAATTGTGACCTATACCCCCGTGCAAAAGGGAGCAAGAATCCAATTCACAATTGTGTCAG
TCAAAAATATTGATACACATTAAGGCTATGGGGTTTGGTGAAGGAATGGCTACAACTTGC
ATATCTTGGCACCACCGCTTGGTACTTGGGGCGCTCAACCAAATAAGAATGATGGATCAA
CATGTGTGAAAGCAACGTTCCAAATAGGCGCACCATGGGCTCGCTCACTATGCTTCTAAG
TTGGGCCATTTGGAACCAGACAAATGATAGAGTCTTCCACCCCAAGTCTGCACCTCCAAC
AATCCTCCTTAGGCTTTGTTGTGTAGAAGTGGATTGAAAAGGTTTGAGGACGAGGGAATT
TGAGGGGATTTGGTGAATCCCTTTCTTTCATCCAATCCTCTCAAATCTTCAGGGTTTTGC
TTCCATCAGTCCTTCGAAGAGGATTCTGAAACACGTGGATAGGAAGAGATTAAAGGGGAA
TGGAGGGGATTCGGCTAAGCAAACCCTTCTTACCAAATGGGCGTCCGAGGTTTTGTGGGG
TTTCTGGCCCTCTCGGGGATTTTTTTCTCGAAACTTCCTGAATCCCTTCGTGTCAAACGA
GGCCTTAAGGGTATAAAGAAAAAGGGTAAACTTTACGTCATGGCAGGGGCAAATCACTTG
GGTCTAATCATGCATGAAGAGTAGTGTCCTTGTTCTATGTTGGTGGATGCTTGAGCGTAG
TTTGTAACCAAAACACTAAATTGCTCGCTTAATTAATGGATAAGATATTTTTTACCTTGG
TTTAAAAAGAAATTTTTATGCATTAATGTGTACTTTAAATATGTTTAAGCTATGTTTTTT
TTCTAAGAGCAATTAGGGTAACATCAACGGATCGACCCAAACGGACGGCGATTTTGTTCG
TTTTTCGTTCAATTGGGTTAGTCGGCCTGTCTGTGTCCGCTTTTTTAAATGGGTCATCAC
AAGCACCCAACGGAAAGCAAATGTACAGCAACACTGTGGTAATATAATAATGGAAGAAAG
GTGGGTGGGAATGGACCTACGAATTAAATAAACAGGCAGAGGTGGGTGGATAGCTGTGTG
ACAAGTAGGTCAGGCCGGCCACATGCGGACACAGAGAGGGTGTGCGTGCGTCCGCTTCGG
GTCCACGCAGACGTATTTTAGTCCCAAATTTGAGCCAGAAATGGGTCGACGCGAACGCAA
AGCGGACGTGTTTTGAAAATGAATCCGTGCGTTCAGCCATTATTTTTATCCGCACGGATC
CAACCGGACGATGGTGAACAAAATAGATCAGTTCATTAAAGTTGCTCTAATTATTTACTT
ATTATGATATTTTATGTGTACGATCAACCGACGTCCATAGATTTGCATGTACTTGAAGTT
TTTATATGAAAAATGTAACTGTACAAGAGTACATTGAAGGAGCCGTTTGGCGCTGTTCAG
ACTCGTATCTGAGTACGTCCATAAATATTTAAGACGTCAGATTTGTCAATTCCGACCGTA
GATTCTTTTATAAGAAAAGGTTTATTTTAAACCATGAACTCATAGAGGTTCGGCGAAATG
AATTTGAAAGTCAAAATCTATGTCGATTGCATCCTGAATTATGCAATCCTGATCTAAATC
AAACTCTGTAATTGCTTGTCAAACCGAAACTGCAAAGGATGTCCGGGATTGTTTTTTTAA
ACAATGGGCAGGGCCTAGTTTATTGGTTTTCTTTTCTTTTTTTTTTCTTTTTATAAATTT
TAGTTTCTTTTATGTGTATATGTTCTCATTTTTTGAAATGTCTGTGTTTCTAAAAAATGT
TCAAGTTTTTCAACACCATGTCGCAATTTGCAAAAAAGTTCATCCTTCTGAAAAATGTTC
GCGCTTACAAAACAAGTTTCCAATTTTTAAATTTGTGAACTTTTGTTTTCAACAATGTTC
TCGTCTTTCAAGTTTTTCAACACAATGTCGCAATTTGAAACAACACTCATCTTTTGTTTT
GGATTTTTAAAAACTGTCCATGTTTGAAAAAATGTTCCGGGATTTCATAAGAAATGTTTG
TATTTCAAAGAGTGTCCAAAAATTTCAAAAAATGTTCTTGCTTTTAACTTTTATCACTAC
TTACGAAAAATGTTCGTGTTTCAAAAAAAATCGTGTTCATGTAATTCAAAACTATTTTAA
AATGTTCTGCATATTCAAGAAATTTCTTCGTATTTTTGAAAAAAATTCTTTGCATTTTAA
AATGGCTGGTTGTACCTGTAGGGTTTTAGAATATATCTGAAATCAGGAAGGAACATGGAT
AAGGCGGCAGTGTTGGGCGACGGGATCGAGGGCTCGATGACTGCTGATGGCGGATCCTTG
CTTTGTGACCGCTGGATCCGACGTGCAGCGCTTGGGAAGGGTGGACGAGGCTAGCAGCGG
CGCTTGACCAGGCCAGAGGCGACGAGGCTTGACGAGTGCGCGACTGCGACGGAGCTTGAC
GATGGCGTGACGGTGGGGCTCGGGAGGGGCGCGACGGCGACAGAGCTCGACGTGAGCGCG
AGGGTGAGGCTCGAAAGGGCGTGACGGTCAGACTCGGGAGGGCACGGCGGCGGCGGAGCT
TGACGAGGGTGCGGCGGCGATGGGTCAAGAAGGTGCGGCGACATAGGAGCTTGACGACGG
AGCGGCGATGAACCAGCCCAGGTTACCCGCCCCTGCACGAAACGCAGGCATTTGGAAAAA
TTAAGTGGGCCGGTCCAGCAGGGAGTAGGGTGTGCACGTGTTGGAATTTTTTTCGAACGA
AAAAAAATTAAAACAGGCCGGCCCATTAGAGGAATCCCAGCTAACACGTTGCTAGGGTTC
GATTTAGACCAGAATTACAAAGTTTAAGGTATAATCAACCGGGATTTTGATTTAAGATTT
ATTCGATCCGGTCAACACAAGTTTAAGGTTTGAATCGAACTTTTTCCTCCTCTTATACAT
CACAGGGCGGAGCCACACACACAGTGTAGAAACGAGCTCCCATCACATTTCTTTCCGGTG
TCACGGAGGAACAAACAAAGCCGTCTCCTGTCGCTCTTGCATGCGGTATTCGTACTACGT
ACACATTACATAACACGTGACCATCCAAGGCTATATCACCATTCAACTTATCAAGTATCA
ACACACGCACGCACGCGCACCCATCGTTCCAACGGGCAGCCGGCGCGTTATTCCGGCCGC
GCACGCACAGAGGCTCGTCGTCTTCGCCGGCCGGCCCGGCATCACGGCGGCGAGAGGCCG
TGCCTGAGCGCCGCCTTCCAGACGACGTCGATGCGGTCGACGTCGATGGCGCCCACCTCG
TGGTGCTCCCACCCCTCCAGGCAGTGCACCACCCCGCCGGCGTGGCACGCGTGCACCACC
CCGCGCTCCATCGTGTACTCGCAGGACCCCAGGCCCTGCACGTCCTTGGGCAGCCGCATG
GCCGCCAGCTTCCCGTAGGTGCAGTCCCGGCGGAACTCGATCACCGGCGGCACCACGAAC
TGGTGGAAGTGCGTGCCCGCCGGCGCCCACCGCTGCTCCCTCGGCGACAGCCACTTGCCC
ACCAGCCACGTCTGAAAATCCAGAGACAACCATTTTCATGTCACAAACATGTATCGATCT
GAGTTCCGAAGCAAGACGAACAGTCGGTACCTTGACGGTCTTGGCGGCGTGGTACTTGGT
GACCTGCACCAGGTACTGCTGGAACTCCGCCGGCGCCTCCCTCTGGATCTTCAGGAACCG
CTCCGACGACAGCGTCAGCATCTGCAACAGCGCCGCAATTCATGCCATGAATCATCCGTG
TCTTTTACTACTAACTACTGATGATCGCCGGTCAGCAATCTGAAGAAGAGTTGTGACGAC
GCGTACCAGGACTCTGATCCTCTTCCGGCAGAGGTAGAGCGCGATGGCGCGGCCGAGCTT
GGAGGTGGCGCCGGTGAGGAACACCTCCTTAACACTGCCCGGGATCTCGTTGAGGATCAC
TGCCGCCGTGAGTGTGTTGCCGTGCACCACCCGGACCCTGAGGTCGGGGTGCTTGTCGAC
GAACAGGGTGCCGCCGCCGTTGAGCGCCTCGTTCTTGTTGAGCGCGGCGAGGCTGAGCAC
CTTGACGCCCATCTTGTCGGCGCGGAGGATGGCGAGCTCGATCTGGCGGTTGATGCCGTC
CTTCATGGGCGGGATGAAGTACTGGAAGCTGTACCTGGGGATGGTCCAGGTCTGGTGGAG
CGCGCCGCGGAGGCAGTAGAAGCTGACGGTGAAGGTCTTGGAGCACAACACCTGGAGCAC
CATGAGGCAGAAGGCGATGGGCCAGAGCGGGAGCAGCACCAGCCGCGTCGCCCACGGCTG
CGAGCTGCACGCCCGGAACGCGAACGGCACGTGCATCGACGACACCACGTCCACCACGTG
CGCCAGGAACACGAAGTCCGGCACCCGGTCGTTCTTCCCTGCAATTCCCCATTCCATTTC
ACTCATCGGTTTCACTGCTGATGAATTTTGACTGAAGCTTGCTGTAGTAAGGATTTGTGG
CATGGTGGTCGGCGTGTGTGTACCTTGGTCGACCTCCTTCTGGAGCTCCCATGACCTGGG
GTGCACGGTGCCGCCGAGCAGGTCGAAGAGCGGCATGAAGAGGCAGAAGTTGGAGTCCTT
CTCCTGGTGGTGCAGGCTCAGGTACCTGTCAATGGCATGACACAGATGATCAGTCACCAG
TCTCATCAAGTCTGAAGCAAGCAACACATGCACTCATTCGTCAGCCTTGTCGGCAGTACA
TCGTCAGTTAAAGCCATCCAGATTCGATCTCAAGCTCAAACCGCACATTAACAAGGGATG
GATGTGACGCACATTAACCCCCCTCTGCCTGCTAATCAACCTGCAGCCCACTAATTATAG
AGACACCACCATGAATTTCTGTATCTGTATTTTGGCAAGAATTATTATTGTGATGCCGAT
GTTAGTTAGTAGCATTGTTCGTCCGTATCTAAGCATGGTTGATCGGCACCGATAAAAAAA
TTCTAAAAAAGGCATATCCTTTGACAAGCAGATGCTATTACCGTACAAGTTTTTTTTACC
GAGGTAGTAGTAAAAAAGAGGAGTGGGCACTCACGTTGGGGTGTAGATGAGGTATCGGAG
GAGGGGGAAGGCCCGGAAGGTCCTGTGGGAGATGACCTCCACGTTGCTGTACCCCATGCA
CCGGAGGTAGTCGAACACCAAGATGTGGCCGTAGACGAGGCTCACCGACCCGGCGCCGGC
GAGGAAGGCGCCGGCGAGCGGCGCCGCCATGGCCAGCGTCAGGACCAGGCTCTCCAGCGG
CGTGCCGTACGCGGCTGCAGTCAGGTTATCAGCACAACCCTCATAAGTCATGAGAAGAAG
AAGGCCATTATTGCAGCTGGGGTCAGGGTACGTACAGGTGAGGGGCTGGGTGACCGGCGA
CGCGTGGTGCTTGGAGTGGTACCGGCTGAAGAGCGGGCCCCGGTGCAGCGCCCTGTGTGC
CCACCGGAACCCGGGCTCCGAGACGGCGACGTGCAGCAGCAGCGCCACCGCCCACCCCCG
CGGCTCCCACACACGGAGGTCGCTCACCGCCGGGAACACCGGGCTGCTGATCGCCATGGC
CCCCAGCAGCGTCTGCATGATCACCATGTTATCCCTGCACAGCCACGGCAACAGCAACAG
ATAAAACGTCAGCCGGAATTACTCGCAGCGTTCCAGTGTCTCGTCTCGTGCTCCAGAATA
ATTGGAGAGGAGGACGAAAGCGATGGCTCTGGCCGCGGCCATCACGCAGTTTGAATGCGT
GTGGGCAGTTGCCTGCCTTGCCGCGGCTCCATGGAGAGACGGGCCGGTGCTGCTCCTGCT
TGGGGCATCGACCAACAAACACCCAGATCGGGACGCAATCACTGCGGCATTTACTGCGTG
CGCCCTCGAAGAACGCCGTGCGCGTGCCAGCTCGTGGTCACCACCAACAGAGCTGACCAG
AACTCATCAAGTTCAAAAGAAACAGATCCCTCTTCCCCATGGCTACGGAGATTAAATCAC
ACACTACTACACGCGAGACGAAACCAACTTGGCCAAATCAAACCAATCCGCAGCGGATGT
GGAGGCTATCCACGAGCTGTAGCGGCGCGTGACCGTGTAGGTGATTAATGGCCTGCTTAC
TTACTCCGTACAGTGCGTGGCATGAACGCGGACAGTGAAGTCAAACTGCGTAGGTAGGTG
GGTTGGGTAGGTAGGAAAAAAACCGGCGGCCGGCCATGGCCATTGGCGGGCTGGAGCGTG
CGTGCGTGCGTGCATGCATGGGCGAGCAGTCGTAGTAGTAGAAGCAGTGAGTAGTACATA
CGCACCAGTCCCACTCGGCGTCGATCTGGACGAAGTCGACGCCGTCCGGGACGACGCGGC
GGCGGCGGGTGAAGAAGAGCATGTTGGCGTAGGAGAACCAGAGCTGGTGGGTGAGCGAGC
GGAGCGCCAGCAGGAGCAGCAGGTGGAGGCACCACGAGTCCGTCGGCGCGCCGCCCTGCT
CCCGCCACGCCTGCGCCACCCCCGCCACCAGCGGCCCGTACAGCAGGTACTGCAACGTCA
AAGATCAACACAGACGACAGAGCAAGATCGATCGGTCAGCACGCGTGTCTACAACTCTAC
ATATCTCGAATCAATGGCGACGGGAAGAAGAAAGAAGAGCTTGATCGGTGCTTGCCTTGT
ACGCGCCGAGGCCCGCCCATGGCCAGGAGGAGAGCGGGGAGCCCATGGCCGCCGCGGCCG
GCCGGAGAAGACGAGGGAGAGGGAGAGACAGTGCCCTTCTCTTGTTGCGTGGTGTGGGTG
GGATGTTTGTCGCCTGCTCTCGACTGTGCGTTGTGCTGTGGAGTCCGGATGCCGGCCACC
GTCGCGCTACTTATAAAAGACGGGGGAGTGGAGGGAGCACGGAGCAGCGGAGCCAGAGCA
GGAGTAGGAGGAGGAGAAGAATTCAACGACAGCCATCCCGTTTGGTGTTGGTGTTGGTAA
TACTCGACGCGTTGGTGGTTACCGGTTAGCCAGCCATGCCATGCCATGCCATGCCGATGC
CGGGGAGTCACTGGGGTGGTGCTTTCGCGCCTTAAAAACGGCAGTGCCCACAGTAAAGTG
ACTGTGGCCGTGTCATGCCCATGAGCGCAGGCTAGCCGGCCGGTGGATCCCAGGTAGAAA
TAGACCTAGGCAGGGTACGTACGCGCCGGGTCCTGTGAGCGCCCATGCTTTTGGGTGAGT
GGCTCGTCCAAAAGTCCCCATGTACAATAAAGTGCTAGCTCAAAGGGGTTAACCACAGCT
CATGCATGTGATTACATGAATCGGGTCTGGCTTCGATCGTGTTACTCCAGCGGCCGTATG
CGTATGCACTTCGGGCGTCTTTTTTTTTTTTTTTTTT