Contig Data
morexGenes
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Map Locations of contig_48038 (4354 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_48038

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_63857 6 1786 bp MLOC_63857.4 Available Available LOC_Os08g20420.1, FRAME:+3, EVALUE:0.0, 13108.m02129 protein MGD2, putative, expressed





CDS Structure of MLOC_63857






Contig Sequence (4354 bp)

>contig_48038 4354 assembly3_WGSMorex_rbca.fasta
CTGCTAGGAATCAAGACTACGGCGTTAAAGGCCAGTTCGGGGGCTACTGAGGGTGTCCGG
GACTAAGGGGTCCTCGGGCCGCTGACCTATCTTCACGGGTTGGGCTCATGGGTCACCCTA
TGATTATCATTGGATGCCGAACTACAAGACAACACCGTGTCTAGAATGGAATCTTCCGAA
GCCTTGGTGTACGCTCCAAGTCAAGGTGATAATATCGGCATGTTTACTCCTTGGTGTAAC
CGACATTGTGTAACCCTAGTACCCCTCGTATCTATATAAATCACAGGGTTTTAATCCGTA
GGGTAGATTAAGATCAATACTCCTAGGGTTTTAGACCACACCATACAATCTCTAGGTAGA
TCAACTCTGTATTTAATACACCATCGTCAATACAAACAAAGCGGGACGTAGGGTATTACC
TCCATCAAGAGGGCTCGAACCTGGGTAAACATCATCTCCCGTGTCTCCTATTATCCATCG
ATCCAAGATCCACAGTTCGGAACCCCCTGCCCGAGATCTGCCGATTTTGCACCAACAACA
GGGGTTGTGGATAAGCTGGCGTGGATGACGACGCTGCCCTGCCGCTTGTGGGGTGGTGTT
GACGAGGGTTGAATGACATCGGGCGCGATATGGCCATCGACGAGATCTGGCGGAGGGTTC
GACGTGTGCCTGCCCTTGATGGTGACGGACGACGACTCGAAGGCTTCCATGGCGGCAGCG
GGCGGACGTGGATGGCGGTCCGGAGCGGCCGGAGCGAGATCAACGAAGGCAGACCAAAGT
GGAAGCGGGATCTGTCGCGCGAAAATGTCCCTCCCGTAAAAAATCTCTGCCGATAGGGGT
TGAGCTCGGACCGGACTCCCAACCCGTGAATTTAAAGTTTGAGGACGAACTTTTACCGCG
CCCCGCAAATGTTTTTATGGTTTGACGACGAATACGCGGTTTGTTCGGGATACTTTTTAA
CGTAGACCTGTAAAATGATGGTTATTTTACGGGTTCACGAGTTATACTGGGTATGGTAGA
GTTGATCTTAGCTGACTAAAAAACGTCTTATATTTTAAGACGGAGATAGGACTAGTTGGA
GATAAAACAGTGGAACTATAATTGCTTGACAAGTTGGGTTGCTAAACAAGCCTAAAGATA
CCACTGTACAAGAGGCGGCACAGCATAATTCCAGCATCTCTCGCAGAATCATCCTCCCGG
CTCCCGCTCAGCACGCTGCTCCAACGAATCATCATCCAGCCGTTCCCCCTCCCATCCAAT
GGTAGCCGAGTTCCTTCTCCGCTTCTACTTTACCATTGCACAATCACCAGCCAAACCCAG
CCTTCTTTTACGTGCACACCTACACATTACCATATCTACGGATAAGTCCTAGACAGCTCC
AGAAAAGGAATATTACACGGTAGATTCCTCGATAGTGTAAGTAAATACGGATTATATCAG
GGAGCGGAGTGAAATAAATCCACACAAGAGCTCTAATAAAGCGCTCTTCCCCGCCGGCGT
CAAGGATTCAGGCCGACGGCAAAGGGCGGGCTCGCAGTCTACGACGAGCTCATAGATAGA
CCCCGAGGAAGCGGCGCCATGGTTATCTCGGTCCCCGGTCACCGGCGCTCCATGCGCGAC
GCAATGCTCGGCGGGGGCCGCCAGCTCCACAAGCCCCTTCGCTGCGCCTTCTACGACGGG
ATTCCCGGCGAAGGCCTCGCCGCCGCGCTCGCCGAGGCCACCGGGAGCGTTTCCCTCTCC
CGCAGTCCCGCCACCGACGGCGGCGGCGGAGGGAAGGCGGCGAGGAACGTGCTCATCCTC
ATGAGCGACACCGGCGGCGGCCACCGCGCCTCCGCCGAGGCTCTCCGGGACGCCTTCCGC
CACGATTTCGGCGACGCCTACCAGGTCCGACAAGCCTTAATCCTCTGCTCTCGGAAGTTA
GACATTCAGTTTCGCTCTCCAAAATGTCCATTTTGTTGAGTTAAATTTGGTTTTGCTGCT
GGTTGGGTGGCGCAGGTGTTCGTCAGGGATTTGGGGAAAGAGTACGGCGGCTGGCCGCTG
AACGACATGGAGCGGTCGTACAAGTTCATGATCCGCCATGTCCGGCTCTGGAAGATGGCC
TTCCATGGCACCTCCCCGCGCTGGGTTCACGGAATGTACCTCACCGCTCTCGCCTACCTC
TACGCCAAGTACAGACTCCAGTCGATTGCACGGCTTGCCGTCGATTTGACAGCGACAATG
CGCGATCCGATTGTGCGTGTTGTTGTTTTGATCTGTTTGGTGACAGGAATAAGGAATTTT
TGTATTTGTTTCAGTGAGGTGGTCGCCGGGATGATGAAGTACAAGCCGAACGTGATCATC
AGCGTGCACCCTCTCATGCAGCACATCCCACTGTGGGTGCTCAAGTGGCAGAGCCTGCAG
CCCAAGGTCCCCTTCTTCACCGTCATCACCGACCTCAACACCTGCCACCCGACATGGTAA
CCAACACGGCATGGTGCAAATTGAGGATTTTCTTGATTGATCAGGATTCAGGAGTGGCAT
CTGAAACCATGAACTTGGCAGGTTCCACCACGGCGTGACAAGGTGCTACTGCCCGTCGGC
CGAGGTGGCGAAGAGGGCGCTGACCCGCGGGCTCGACCCGTCCCAAATCCGCGTGTACGG
GCTGCCCATCAGGCCATCCTTCTGCCGCGCCGTGCTCGACAAGGTCGGCATATCTTCGAC
CTTCGCATTCTTCTGCCATTGCCTGTGCCAAATCAGCTCTTGAACTCTGCTTGGTTGGTT
GACAGGATGAGCTGAGGAAAGAACTTGGCCTGCACCCTCAACTGCCCGCTGTTCTACTGA
TGGGTGGCGGCGAAGGGATGGGCCCGGTGGAGGAGACAGCCAAGGCCCTCGGCCAGGAGC
TTTACGATCACCAGAGACACCGGCCGGCCGGGCAGGTCGTGGTCATTTGCGGCAGGAATC
AGGCGCTGCGGTCCACCTTGCTGTCCCTGACATGGAAGGTCCCTGTCAAGGTAGTGCCAT
TGCATATGCCGAATCTAAAATTCTAGATGCGCATTTCAGATGGATGCTGTGAGTGACTGT
TTGGTTGGTGCTGTGCTGACTGAACTTTTCGAGTGTTTTGTCTTCAGATTAGGGGGTTCG
AGAAGCAGATGGAGAAGTGGATGGGCTCTTGCGACTGCATCATCACCAAGGTAAGGTTCC
TTCTTGCCAATATGTTATGCCTCTTGATTCTTCATTACTGGAAATGCGATCTGATCTGAC
TGAAGTATTTTTGTGGCACTTGCAGGCTGGCCCCGGTACAATTGCAGAAGCCTTGATAAG
AGGACTTCCAATTATTCTCAACGATTTCATCCCTGGACAGGTTTATGCTTGTGCCAGTAA
ACTAGTTCTGAATTATACGATTCTATGATCCTATCAGAAAGATTTTAGTCGGTCCAAACA
ATTTAGACCATCTCAACTAACTACGAATGTTGATTATATTTCCGTTATAGGGTAGGCCGT
CTCAGAGTGTCTGTTTGTTGCTACTGTCATTGATTAGTGATTACTTCCAGAGTTCTCATG
AAATATGTCTCTAGGTAGCTAACATTTATCCCTAATCTTTTATCATTCAGGAGGTAGGGA
ATGTGCCTTATGTGGTCGACAACGGCGCCGGTGTGTTCTGTAAGGACCCAGGGGAAGCTG
CAAGACAGGTTGCCCGATGGTTTACTACAGAAACTGACGAGCTCAAGAGGTACTCCTGCA
ACGCACTGAAGCTAGCGCAGCCCGAAGCAGTGTTCGACATCGCGAGGGACATCCACAAGC
TCCAGCCGCAACCAGCCGCTCTAACCCGGATCCCCTACTCGTTGACTTCATCGTTCTCAT
ACCATATATGAACTTTTGGAAACTCTTGCAGAATATACTCTGCAAAGTGAATATGCCTTC
AAACTTGGTTGTGGCTGGGCTTGGCTGCCTGCTGAAGAACCTGTATATACCATGTACATA
ACTGGATGGCCCGTCTATGTTGGTGTTTCTGTTGTGCTTGACTGCTTGCATTGGACTATT
GGTAATTGAAATGCGAAAAGTGTTTTTCTGACCAAATTATTGCTTGATAAACATATATCC
CTAGCCCGTAGTAGTTGTAGTGTAGTTGCTTGTAAAAGACCAGTTGGTTTCTTTATATGA
AATTGGAGGGAGAGGCTCCTCTTCCGCTAAAAAATCAACATTTGCTAATATTATTGTCAT
TGTCATACATGTTTTGTGCCGCCCGAGTTTGATACCAATATTACATGCTACGTGTTGGGT
TCTCGATTTACGCACATTGGAGGACAACTAGCAAACTCCATAATAACTCAACCAACAACA
AACACATGCATAAAATCCTTTGGGAATCAAGCCT