Contig Data
morexGenes
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Map Locations of contig_47955 (5423 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012




Predicted Genes from contig_47955

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_63771 5 1587 bp MLOC_63771.1 Available Available LOC_Os09g23560.1, FRAME:+3, EVALUE:0.0, 13109.m02227 protein dehydrogenase, putative, expressed





CDS Structure of MLOC_63771






Contig Sequence (5423 bp)

>contig_47955 5423 assembly3_WGSMorex_rbca.fasta
GTGCTTGACAAATTGAACATTAGTTTATTCTGCATTTTTTTAAGCCTAAACCATAATTAT
TTTAAAGCGCCTATTCACCCCCTCTAGGCCACATCCACGTCCTTTCAAGGGTACATGGGT
CATGGCCCAACAGCCTATACGCAGACATGGCTCGGTCGTCCGAGAGGCTTCGGACGTCCG
AAGGCTGAGAGGGGCTCGGACGTCTGGCGAGGTCCGGTCGTCCGACGTCTTTGATTCGGG
AGCGAGGGTGTCGAAATTCCGGGGCGCGTCGGTCGTCCGTGGCTCGGTCGTGCGTCGGGT
CTGAAAGTCTGAGCGATCGGTTCGGTCAGGGCGAGGCCGGTCGTACGGGCGGTGCCAGTC
GTCCGGGCGTTGTGGAGGGAGGACTCGAGCGGTTCCAGGAATTGGTCGTCCGGACGAGCT
CGGACGTCTGGATGCTGGGATGGCTCGGACGTTCGACTGGGCTCAGTCGTCCAGTCACTA
GGGCGTTCAGCTTCAACTTCTTCTCTTGCTTCGTGCTCCTTTGTGTGATCTCTTTCCGAG
CACATGAGTCTGTAGAGTGTCTCCGCTTGAGGTAGCGACCATGTCTCGAGTGGATCAAAT
GACAGGTGAGCAAAGAGAGACGTCACCTCGTTTTCAAGGACACGAGTACGGGCTCTCGTC
ATCGGTCCACTTGTAGCTTGAGTTGTTTGTGTCGTATCCATGGGGATACTCAAGGGATGC
TCCGTATCACCCCCAAGGCCCTTTTTTGTTCCCGACGTGAAAAAAACGACCCAGTCGCTC
CCCAGAAGCTTGGTTTCACCGGATTTGGTCAAAGTTACGTCCAACCCCTTCCAGGCCGAA
CCAAGCGTGCTCGGGGCGAGCTAAGGACGCCGACGCTATTTTTCCGCATGCGATTGGCCC
ACAACCAGCCACCTTTTCATGTGTGTCCTCTCTTTCCACCTACCCGACGCACCCAACGTC
CTCTTTCTCTCCTCTTTTTCTCCCAACAACCCGCAGCTTCTCTGCTCTCGCGGCAGGCCG
ACGGAGACCATCGCGGAGGAGGAGGAGCCACCAACTAGCACTCCTTGCCACCATCTGAAT
CCACCACCACCTCCGAGCAGAGGAGAAAGAGGCCGTCGACGGCGAAGTCCATGAAGGAGG
AGAAGGGGTTCCAACCCCACCTGATGCGCAGCAACGGGAGGATGTGGGGCGCGGCGGGAC
AAGCGTGGGAGCGGCGACGAGGCGTGGGAGCTGCGACGACGCGGGATATTGGGCAGGGCT
CGCCGCTTGCCGCTGTAGCGCGCGCGGAGCGTCACAGACGATGAGCTCGACGAGCTGCGC
GCCTCCCTCGATCTGGTTGGGGGCGCAACGACTCAGAATCTTTTCCCCTCAAAGCTAAAT
TAGCGCCAGCAAATCTCAACTGGACGCAAAAATCATCTATGAAAACACAACAGCTGGAGA
CGCTCTTAGTTTTCGGATAAGGACAACCCCGACCACACACACGCTTCCCATCTCCTACGA
GACATTAGAGTAGTGCCATACAACTCGAGTTCCAATATACTCCCTCCGTTTTTAAATATA
ATGTCTTTTAGATATATTTCACTACAAGACTACATACGAATATATATAGTCATATTTTAG
AGTGTAGATCATATTTTAGAGTGTAGATTCATTCATTTTGCTCCGTATGTAATCTTTTAG
TAAAATCTATAAAAAAAACTTATATTTAGAAACGGGTGAAGTATCTATTGATCCGAGTCA
AGAAAAATGTTGAGTGCGACTGTACATAACAAGATCACCGATGCGTAGCAATACAACCAA
GTCTTAGGTACTTGAAGCTCAACCGATCATGTCGCAGATTTGGAATCATTCCTGTTTTAG
AAACGTATTGCAGTAAACAATCAGTCAGAGTACCCACAAATTTAGATATTCTTTCTCTTC
TCTTCTCATGAGAGAATCTTCAACGAAAGCGTAAAAAATCCGCGCCCAATAAATTTTTTA
GCGCGTCACTATAGCAGTATTGGAGCGTGGGGACCGAAGCATCTTCAACAGACGCGCTAG
TGCAGCGTCCAATCCAGTCTGATCCAGGGGTCCCATCTGCAGCAGCTCAGAGTTTGTTGC
ACGCGTAAGCCGGCGCACCAATGCTACGCGCTATAGTGTTCTTAAACGCGCGTCTAAAAA
ATTTAGCGCGCGCGGTGTTTTGCAACTTCTGCTGGAGCAGTCCGGCGCCCAAAAAACGGA
CCTTTTAACGCGTGAAGCAGTTTTTGAACGCTCGTTGGACATGCTCTGAGTCGGGTCGGC
ACATAGCAGGCGTGGCAGGCATGGTTCGTCCTCGCTGGATCGCACGTGATCACCAGACAT
GTCGAATCATTCGCCGGCCGACGATCATTGACCCCACATCGAATGGACCGCTCCATAATT
GAGTAGGTGACCTAGTGGCCCAACCGCACACTCGCTTCAATTCGTTTACAGTTGAGAGTT
GAGAAAGAGGAACACAGCACGGGCGCCCTTTCCCGGTGGCTACAGCGAAGGTAGGGTTAG
GACTTGCGATTGGCATGTGTTTCCCATTTGATACCGCACCGGCACCGCTGTAGCTGGAGT
ATATAGTATCTGACGTTCATGCCCTACACACGTAGTAGTATCTGACGTCCACTCCAACTC
GTCAGCTTGCCTATTTTATCCCCAATCTCGTGGCTTGGCAGCATCATCCGTATTCTTGAG
CAGGAAATCTAAGTGCTGCTAGGACCGACAAGCAGAGCAAGCAGTCATCAATGGCGAAAG
GCATGCCTGCGATCGGTTGGGCTGCGAAGGACACGTCCGGTGTCCTCTCCCCCTACAGCT
TCTCACGAAGGTCGTCTTCCTCTGTCCAGTCCCTCTCATGCCCCTCTGTTTCTTGCGCCG
ATCTGACGAACTCCTCCACGTTGTGATGCATGATAACAGGGCTCAGAAGGACGACGATGT
GACGATCAAGGTGCTCTTCTGCGGGATCTGCCACACCGACCTCCATATCGTCAAGAACGA
GTGGGGAAACGCCCTCTACCCCGTCGTCCCCGGGTGGGTGAACGTGAACCCATCATTCCA
CAATTCGCCTCCTCCAAATTTCTACTCTAGAAGCTAATGGTGAATTCTTGCGCAGGCATG
AGATTGTTGGTGTCGTCACAGACGTTGGCCCTGGCGTCAAGAACTTCAAGGCCGGGGACA
CGGTGGGCGTGGGCTACTTCATCGACTCGTGCCGCTCCTGCGTGAGCTGCAGCAGTGGGC
ACGACAACCACTGTCCCACGCTTGTCCTCACCTGCAGCGCCGTGGACTACGACGGCGCGA
CCACCCAGGGAGGGTTCTCCGACGTGCTCGTCGTCGACAAGGGCTACGTCGTCCGCGTGC
CGGAGGGCCTGCCCCTGGACGGCGCGGCGCCGCTGCTCTGCGCCGGCGTCACGGTGTACA
GCCCGATGATGGAGTTCGGCCTCAACGCGCCGGGCAAGCACCTGGGCGTGGTCGGCCTCG
GGGGCCTCGGCCACATGGCAGTCAAGTTCGGCAAGGCGTTCGGGATGACCGTCACCGTGA
TCAGCTCGTCGCCGAGGAAGCGCGAGGAGGCGGTCAAGCGGCTTGGCGCCGACGCGTTCT
TGGTCAGCCAAGACCCCGAGCAAATGAAGGTTACGTCTTGTTTCAGTTGTTTCCTTCCAT
TAACTGACACATGATTCTTGGCACGGGACGGGAGGCATTGACGCGCATAAGTTTTTGGGT
GCAGGCGGCGGCGGGCACGATGGACGGCATCATCGACACGGTGTCGGCGGGGCACCCGAT
CGTGCCCCTGCTGGAGCTGCTGAAGCCGAGGGGGCAGCTGGTGGTGGTGGGCGCGCCCAG
CACGCCGCTGCAGCTTCCGGCCTACGCCATCATCGGCGGCGGCAAGCGCGTGGCCGGGAA
CCTCGTGGGCAGCGTCGGCAGCTGCCAGGCGATGCTGGACTTCGCGGCGAAGCACGGCAT
CACCGCCGACGTCGAGGTCGTCAAGATGGACTACGTCAATACGGCGGTCGAGCGGCTGGA
GAGGAACGACGTGAGATACCGCTTCGTCATCGACGTCGCCGGCAGCCAGCTGGGCGCCGC
CGCTTAGTGCCTCCAAGTGTATGTATGCCCACGCGTGTCGTTTGGTTACCTACCAGCTTC
CAGCCACATGAACTCGTCATTTGTTGTTTCATTTCCACGCATGGGTTGGCACGCGCATTT
CCAGAATTGCAGTTGAAATAATAGGTGCTATCTTTATTTTGTAACTTGACCACTTTTATT
TATTACTAGCATAAATGTTCGCGCGTTGTAATAGAAGACATTACCACATGTCTCATGCTT
CCTTTTTTTTTCCATCCTCGTCTCCTCGTCCAAGTTTGTTATCAACATCTCTTTCCCCGG
CTCTAGTGGACCATAATGTTTCAGATAGCGAGCTTCTTCATTTTCATTAATACAGCCTTC
AGTTGAAATGTAGTGTTTCGTCGTGTATGTTGTCTTCTTAGAAGAGATAGACGAAGAACA
CATAATGTAATCATTACATACATAAAAATTGAACCAGCTAATACATAAAGTTTTCCCAAC
ACTTTATTTAGCCTGAATTCCATTTATTTAGTCCACGTATTAGCAAGTTCCTTGTTGTAA
AAGGCACCCCATCTACACATAGGAGGCATCTCTTGTACTCCCTCCGTTTCTAAATATAAA
TTTTTTAAGATATTTTACTAGGAGTCTANNNNNNNNNNNNNNNGAGTGAATCTACACTTT
AAAGTATGCCTATATACATTCGTATGTAGTCCACTAATGAAATTTCTTTAAAGACTTGTA
TTTAGGAACGGAAGGAGTAGTTGTTTAGTTGCCCATGCAAGCGTGTCTTAGGAAGAAATA
TCTCTTAATTTCCCCTTTTAATTCCTACAACATTTCTTAAGCATTCATTAGGAAATCCCG
GCTCTTAATTATTCCACATATAGTACTGATTCATCCTTCCTATTTAATTGCCCACCATAT
TTATCCTTCATGTTTTCTTCTTTTTTTCTCCTTTCGAGAATCCTTCCTTGCTTCAATACT
TCCTTTCTGGGCACCCAATCGTCATCCTCCGATCACCAATTTCCAAGCCAACTTATTAAG
ATGATCGATGACACGTAATTTGAACACGTATATAAATTGATGGTTGTGTTTGTAAAAGGC
GAGGTGGTATTTTTTGATAAGAAGAGCAACCGCAGCCAATCAACATAGATCGACACACTT
CAGTTCAGTTGGTTGGCGTCAAATCTATCGGCTAGAAGGTTGTGAGTTCAATTCCTCTAC
CAAACGTGTATGTTTTTATTCTTTGCGTTGCACTCGAGCTGGGCCGAGCTAGCCAACGGA
CAACCTGCAAGCCCAAGTACTTTCTCGTGTTGCACTGGAGCTGGGATGAGCTGGCCAACT
GTAACACCCAAGATGCGGTCCTA