Map Locations of contig_47943 (9307 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012




Predicted Genes from contig_47943

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_63757 3 1884 bp MLOC_63757.2 Available Available LOC_Os04g14690.1, FRAME:+1, EVALUE:0.0, 13104.m01362 protein flavin-containing monooxygenase family protein, putative, expressed





CDS Structure of MLOC_63757






Contig Sequence (9307 bp)

>contig_47943 9307 assembly3_WGSMorex_rbca.fasta
TACCTGTGTCGGTTCGGCGGGCTGCCCGAGGGCTAACCCTAGCCGCCACAGCGCCACCCA
CCACCGCTCCCTACTACCCTCGCCGCCTCCAGTGTTGGTCGCCTTGCTAAGCCCGCGTGG
TTCGGCGGCGGCGGGGCACTCTCCCCCTCCTGCTGGGACTGGGCAGACGGTTCTTTTCTG
GTGGGGGCTCGACCGGGCGTGCACTGTGGAGCGGGTGCTCGCTCGGGGTGGCGCGGCAAG
GTGGCGCACGCAGTGTGGCACGGCGGGAGGCGCGGTGCGTGGCGACGTGTGTCCTTGGTA
GAGGGAGGGCCCTCCTTCGTCCTGTTCGGCGACCGGCGGCCACGGCGTGGATCCGATGGA
CGGCTCTTCTGAGGGCGTCCTGTGGCACGAATCTGGTGGCAGGGGGCCGTTCACGATGCG
GCTCTTCGGGCACGCTGTGGCGACGCTCCTTGCCTCAGCACCCAGATCCGTCCGGCCTGG
ATGGGGAGGTGTGGCAGCCCTCCCGTCCCTGCAAGCAGTCTACGCGTTGGTGTGCTTCTA
CTTTGCGGCGGAGCAGCGGCGGCGAGTGTGTCGGTGGTCCTGTAGTGTTGGCGCGAGTGC
TGTGCAGGGGTGCACGGGCCAGTGGAGGTGCTGGTTGTCTTTGGTCGGCTGCGTGGGAGT
GAAGGCTATGCTGCTCCAGGCGAAAGCTTGCTTGGTTTCTTGTCAACCGACGGTGGCGGT
GCCAGTGGGCGTCGCTATCTTTCTTTGGAGCGCCGTTGAGGAGTTTTGTGCAACCTTTCC
TCTTAGGTCAAGAACTTGGGACGAAAGTCATGATCCTTTCAGTTGGATCGGGCGGCGGCG
ACGTCTTTGAGATCTTGGCCCCTTCGGCATTTCCGGAACGCTGGACGTGCATGGCATCGC
GGTCGACAGGTGTCCGACCGGCGGTGCGAGGCTGGTGTGGCGTTGCGACGGGCGTGGCAA
CGACTATGGTGACGAGCGGTGCCGAGTCGCGGCTTGTCCTTCTGTTGCCGATGGTCCGGT
GCGTCAATGGATGCGCCTATGTTGATTTCTGGCTGTGACAGAGAAGTCGATGCTACTGGC
GCCGGGACCACCGCGGCAACGATGACTCCATAAGGACGGTTTTTAGCGGGCGGTGCTCTC
TGGAGATGTTGCGCTGGACTAGGTCGGTGCGAGGCTTGCAACTTTTTTTGTGAAGCTCGT
TGGCAAAATCGAAACTGTCTTGTCCTCGATGATTTGACTGTTTGGCGTTTGTTGCTAGGT
CGTCCGTGTGCCCCATGTGGGGCTTGTAATCTCGGTTGTCGTCTGATTTTTCTCTAATTA
ACCGGACAACTCTTTTCTTCTTAATCAATGAAAATAACAAAAAATTTGCCTCATATAAAA
AATAATAGATGCACATTGCTGTACTAGCTAACTCATGACCTAAAGAGTTTTCGGAGCTTT
TTGTATATTTTTTCATCGATTTTACTAAAGCACATCTAGATGTGTCCTACATATTACACA
TTTAAATTTTTATGGCAATGCTTTTATGCGAAGATTCATGTCACTTTTTTTATTAAATCA
CTTAAATGTGTAATAACTAGGGCACGTCTAGCCCTGGACAAACTTTTTTGATAACTACTT
CCTCCGTTCATAAATATAATATAAGTCTTTTTAAAGATTTCACTATGAAACTATATACAG
AACAAAATGAATGAATTTATATTTTAACATTTGTCTACATAAATTCATATGTAATTTTAT
AATAAAAATTATAAAAGGTTTATATTTAGAAACGGAAGGAGTAGTCTGCATTGTGGAGCG
CCCTGGACAGACTTTTTTGATAGCTCAATATGCACAGTGGAGCACTGACTATCTCTCTAT
AGTGCGCTACATATCCGTACACGTCCACGTACGTGTGCGTGGCGTGGTACGTGCTACATG
CAACACATGCAACGTATACACGTGCCACGATTTGCTCAGCGACATGGCCTATCATTGTGT
GGCTTGACAATTGATGCCATATTTGCTGAGCAGAGACTATGTGTGGCCTTGGGACGAATG
GTAACAAAGATAACACGTCAGAAAGAACGGCGCCATGCTTTAAATACGTTATCCAAATCC
AGGATCACAACATCACGTAGAACTTCAACAAAGCAAGTGGTGCAAAACCGCTCTTCGGCC
ACCCATATATGATGACTATCATCTAGCAACGCCATCAGACACGAACGTTTATACACGTAT
ACTACTAGCTAGCTAGTAGCCCGGATGGAGAGGAAGAGGGTGGCCATCATCGGATCCGGC
GTGAACGGGCTGACGGCGTGCAAGCACCTGCTGGAGCGGGGCTGCCGGCCGGCCGTCTTC
GAGGCTGACACTCTCCTTGGCGGCGTCTGGGCGCGTGCCCCGGACTGCACGTCGCTGCAG
TCGGAGCGGCCCATGTACCAGTTCTCCGACTTCCCGTGGCCCGAGTCCGTGACGGAGGTG
TTCCCGGACCGCCGCCAGGTCGCCGACTACCTCGACGCCTATGCCCGCCGCTTCGGCGTG
CTCGACTGCGTCAGGTTCGGCCGCCGGGTGGTCGGGATGGAGTATGTGGGCGTCGGCGAG
GAGGAGGTGGCCGCCTGGGAGGAGTGGGCCGGGTGCGGCGAGGCGTTTGGTTCCGGCGAG
GGTGAGTGGCGCCTCACTGTGGCCGACGCCGAGGGCAACATGGAGGTACATATATCGATT
GAACGACGAGGACGAAGTACCTAGCTGATCCATGCCTCTGTCGACCGTGTTTTATGGTTT
CCACTGTCAATGAGATTTAGATGAAATTCATTGAATTTCAGTACACACTGGAATATTTAG
CTTTTGGCCAAAATATTTAAGCAATTTCAGTAATACACAACAACTCAAATATATTTTTTA
ATAGTTCCTTTCGGTTGAATTTAACTGTTTCAGCCCTTAACTTTGACCCAAATGCGTACC
GAAATCAGTGTTGTTGCTGAAATATTCCCGAAACTGAAAGCGAAAACCAATTTGTTTCTA
TTTTCTACCCCCTAGCTTCTAATGTCTCTTTCCAATCAGTGAAGCTAATGATCAAATTTT
TGCTGTCTTCAGACACACGTGGCAGACTTTGTGGTTCTTTGCCTTGGGAGGTTTAGTGGC
GTGCCCAACATACCCACATTCCCTCCAGGCAAAGGTCCAGAAGCATTTGATGGAGAGGTG
ATCCACACCATGGATTACGCCAAAATGGGCACCAAGAAAGCTAACGAGATGTTGAAGGGC
AAGCGTGTGACCATCATTGGTTACTTGAAATCGGCGCTCGACGTAGCTGCCGAATGTGCA
GACGTAAATGGTACACAATCCTACAATTAAAATTTATTCCATCTTTGCGCAGAAATAACT
ATGTCATTATCACAATTTTTGTTCGCATGCCCGACCAACAATGGGCTGTTTTTCATCATT
CGATAAAATTGTGTGCATTGTCTGTCATTATTACATTGCCTGAACTCTAACAATTATTCT
CGATGACAACTTCGATAAAGCTTGCTGATCCTGCAGGCATTGAACATCCATGTACAATGG
TAGTCCGAACAAAGCACTGGATCATACCAAGCTACTATGCTTGGGGTTTCCCTATATCAA
ACTTGTATTTAAACCGCTTCTCTGAATTCCTCGTTCACAAGCCCGGTGAGGGCTTCCTCC
TATGCCTCTTGGCCACCATCTTGACTCCACTGGTACTGAAAATCAGCATGTTATTTTACA
TTTGTGTAATTTACACCTAGGTTTCAAACTAAATCGGCACACGTTTAATTCTTGTTTGTA
CATGAATAGAGGTGGTTATTCTCAATTTTTGCTGAGAGCTACTACTCCATACCCATGAAG
AAGCATGACATGGTACCTGACCATAGCTTATTTGAGGCACTAGCCACATGCTTGATTGCC
ATTACACCAAAGGATCACTACAAGAGACTAGATGAAGGCAGCATTGTTCTGAAGAAGTCG
AAGACCTTTAGCTTCTGCAAGGAAGGTGTACTTGTTGAATGTGAATCTTCACCGATAAAG
AGCGATGTAGTGATCTTCGGAACGGGATTCAAGGGAGACCAAAAGATCAAGAACATGTTT
ACTTCAGAATACTTTCAGAGTATTGCAGTTGGGCCAACGTCCTCGACAGTACCTCTCTAC
AGGTTACCTCACTATTACTACCTGACTTTTATGTACATGCGTTCCTGATTTCCAATCTAG
ATCAGGTTATTGAAGATTTTCTTCATTTTTTATATTCAGGGAGTGCATACATCCTAAGAT
TCCGCAGCTCGCAGTCCTCGGTTATTCAGAGAGCTTGTCGAATCTGTACACTGCAGAACT
TCGGGCCAAATGGTTGGCGCATTTCATTGATGGTGGATTCAGATTACCAAGTGTTAAAGC
GATGCAGAGTGATATCCTCGAGTGGGAGAAGTTCATGAAGCGCTATTCTCGTGTCTACTT
CCGTAGGTCCTGTATTGGACTTCTTCACATCTGGTACAATGATCAACTATGCCAGGACAT
GGGATGCAACCCGAGAAGGAAGAATGGCATTTTCGCTGAATTATTTGACGTATATGGTCC
CCATGATTATGTTAATCTTCACCCTAAATAAGAGAAGATCTTGGTAGAATTCATATGTGC
AGCTCATATGTTCCTCGCCATCTGTGGTCTTAGCAATCGCTGTGGGTTATAGCAGCTTAG
TATGTTTGTCATTGTGTATCTTCTAGCCTGGTTATCCTTTATGGTCGATCATATGATATT
TCGATAAATAATGATTCTGTGATGAACATACATCAGATATTTTAAACTGAGGACAAGGAC
GTAAACCACACGCATGGTTAAAGCATTGTTGCCTTCCGCAAATATTATATCTTGTGACTG
GTCACACACAGAATATGTTTTATTTCTGGAAGCTTTAGGGAGGAATTCAACTATTCTACA
AACCATCTAAACTAGGATGAACCTTCAAGCATCCAAAAACACCCGCCTACTATATCAGCC
AAGGGGCAGGGCAAATCAGAATTTATGAACATGGTTCAATCTAGCATAAAAGGTGTGCAA
CATAAACCATTTCTGGTGTTCCACATATATTCCACGCGACTAACCAAATAATAACCATTT
CTAGTGTTCCACTTGAGCTACTGCATGTTGCGACCGAGCTCACGAGACAGCACCCCTTAT
TGCAAGCAACCGCAATGAGGACGCGGTCTTTGCTGGCCACTGATGTTTATGGCTTTGTGC
CATTTCGATAGGGTTCAGTAGCCACAATGGTGGCAAACACTAAGAAACCAATATCATAAC
AGGGGTGTAATATACTTCATTACAAGAATATAATTCCATGACACAAGTCACAAGGCAACA
CAAACTACAAATGAAAAGAGTGATAATTGAACATCCCAGTCTCACAGCAAGAGGATGGAT
TAGTTTCTTGCAAAGTTGTGAGAAACAAACAGGTGACACGAACACAAGAGAATCTCACAT
AACGAAGTGCTCGAACCGGACTTCCAGGATTTCATTCAACAACAGATGAACACCACATCA
CTTCAGGTCCAAATTCCGTCTAAGTGAAAACCATGGTCATCGTTCGTTCAGATGTCTACA
TCATCATACATGGCAGACTCTGAGGCAGCATCATCATAATCATCCACATAATCAAATTCA
CCGTCAGCATCAGCATCAGCATCATCCTCATAATCAAATTCACCGTCAGCATCAGCATCA
GCATCATCCATGACCACATCCAGCAAATCATCGTGCATATCAACCTCAAAATCAGAACCA
GTGTAATCCTCGCTGTAATCCTCACTGCTGTCAACATAGGCTCGGTACTTGAAATCAGAG
ATGGGATCATGAGGAAGCTTAAGGTTTCTAATTCTAGCACACTTTAATTCAGAGCATCAT
CAATTTGGAGGTTGTAGCACATACGTACGTCAAGGGATTCAAGGTGAGAGCAACGGTCAA
GGATTGCCATCAGCCCATCATTAGATACTTCACTGCCAATCAACTGAAGGACTTGGAGAC
CAGGCAGACAATTAGCAATCCATGATGCTTCTGGGTCAATATCCAACCGCTCATAGGCTG
CATCAAACCGCTTATGATAATCATCCCAGCGTTCATTTAGCCTAAAGCATTTCAGCTGTG
CGCGGGTTTTGACAAGTAACTGGCAAAAATTGCCATACAATGAGCAGAACGAAATATCTA
ACTCTTCAAGCTGACGAAGGCGATTAATTGCATCTGCCAACCCTTTATCAGATACTTTAT
CAGAAAAGCTGAGTTGAAGGCTCTTCAATGAGAATGCTCTGCGTTGAGACATGGAAGTTT
TTAACCAACCCAAACATTGAAGCTATACCAAATCCAAACATACTTTCGAGGCTCACAATG
AGAAATATCACTGGAACAACATAACCAATTGAAACAACCATCTGAAAATAAAACATTCTA
TGATGTTGGATTCATCATAATCTTCAAAAAGGTCGATAACTGAAGTTACATGCAAATGAA
CTTCAACGTGCAGTTCTGAAAAAAATACCGCATGATTTGATACTGTGTTTGAATTCTACA
TGTCAAATATAGTAAACGTGAGAACAAGAGCTGAATAGAGCAATGGAACAAGTGTCAATT
GGCGTCCGGCCTACAGCAGGCGCAAATCCAAGCCTAAACTAGGTTCGGCTAAGGACGTGT
GGTCCAGAAGAGAGTTCCCTACTTTCTACTCCAGTATAGACTATATATAATTACAGAAGA
GTTTAAATAGGTTATGGACAATTAGGAAGTGACTAAGAATAATTAGGAATTTTGAGTTAG
ATTCAGATTGAGGTGAAGTCAGATCAGTTTGTACGCAGAGCCTCTATAATGGCCAAACCT
AGTTGAAAAATAATCAAGCAAGTTTAATCCCAATCTTTCTTACCCTGCTATCATGCCGGG
CGCTCTTTCTCTCTCTGCTCAAAAACCATGGGTGAACGAGGTGTACAGTTTCATCCCTCC
TATCAACCACAATCAGAATCTTCACTCAACCAAAACATTCACACCCCAAGCCAATGCACC
ATGCTTCTGGTAGAAATCAAACTTGGTATATCCAGTAAATTCAATTAATAAAAGTGAGAT
CACTTTATTTCAATGCACCAACAGATCAACACAACGAAAAGAAAATATGAACTCTGACTA
GCACTACGCATACCAAGCAAACAGGTGATCACAAGAATATTTAAAAAAATGGTTAGCTTA
GACTTTTTGAGTCAGTGACAGATATAGAAGTTTCAATATCATAACAGAAAGTAGCTACTA
ACAGTTACACATTTATTTGTTCACTAAATAATTATTGCACTGATTGTTCTTACTACATGA
TATAGATTTACACAAAGGGTATCGAATGTGCATTCAGCAAAGGGCCTTCAACAGTTTGTA
TGACAGAAATGTTGAAGAGGAGGCCCGAAACTAAGTGAAATGTGCAGGCTCACTAAAACG
TTCAGCCTTTAAGTACAATGGTTATTTCGCACATAGAAGTCACTCAATCAGCACAGAGCA
AACCTACATCTTTATTCTGAAGTGTTCTTTCTACACTCCAGTTAACACAGAAGGAAGAAC
ATGTACCACGTCAGCTGTATGACTCTATCATCTACTCAAAAACATTTAATAACATACTCC
CTCTGTCCTAAAATTCTTGCCTTTGATTTGTCTAGACACGTTTTAGTGTTAGATACATCA
TACATCCCGTATCTAGAGAAATCTAAGACAAGAATTTTGGGACGGAGGTAATATAATGCT
AGTTAACCATGCAGCTCAAACCATTTAAAGTGATTGTTTGTGGTCTACAGTTCAAGAATA
CTTGGACCTTTACAGCAAGTAAGAGTCACACAAAAATGCAGCACTAGAGACTCGCACGAT
ATATCCTAAGCGTTTTACTGCTGAGTACCATTTTGCTCCCTACAATTTTATTAGGTTATT
ACAAAAGGCTTCTTTGGTACTAACACTAGAATTGTCAGAAAATCAAAGGATCTTTACATA
CCCTATATACTGATCTTGGACCGATTAATGCACTCGTGTTATCAGCATGCCATTAGATCT
TAACTAAACCTAAACCAAATATTCTGTACGAAATACTGATTACCACTTGCACAATTTCAA
AAATCTTAGACGAGTTCATTAATTTTGTTGGTGAACACCCCATTTGATAAAGCAACCTAC
ACATCAAAAGGCACTACGGAGTACAAGATAAATTCCTTGCAAAAGTAAAAGGATGCAAAA
TGGTTGTCAAATCAAACAGCAGATAGGTCCATTTTCTAAGCACGAGTAAGAATATATCAC
CACGATCGAGATATGCGTTTTAATTTACCAGATGTACGATCAAGATTGTCCACTCTGCCC
GACTGAAGGTACTAACTAACAGAGACTCACATGTACATACAAATCTGGTCATCCGATATT
CAGAACCAATCAACGAAAGAAATGGTCATGTAATAGGATGAGGAAAGATGTCGCAACCTG
TCGGAGATGTAGCGGAGGAGGCGGTCAGTGAAGAAGGTGCCGGCCCAGAAGGCTTCCATG
GTGCCAGCGGCGCGGTCGACGGCGGCGCGGGCCATGGCCTCGGCATTCAGGACGTCTCCA
TGGTGGGTCATGTCCACGCGACGCCACAGCATGGGATCAGGTGACCGTGTACCTTGCGGC
CCAAATTCAAATTTAAACATTGCGAAAAAATCTGAAAAAAATCATGCATGTTCACAACAC
ATATTAAGATAACCCCGAAAAAATTCAGATCAATATTCGAAACATACATCGGGAAACAAA
AAAGAGAAATCTGTCATGAATAGTTCGCAATGGTTCTGTGTATACTATTCACATCTGAGT
TTTTCTTTTTTGTTTCTTGATGTATGTTTCGAATTTTGATCTGGATTTTTTAGGGGTTAT
CTTAATATGTGTTGTGAACATGCATGATTTTTTTTAAATTTTTTCGCAATGTTTAAATTT
AAATTTTGGCCGCAAGGCACACGGTGACATGCAAACGTGCATGTCACCTTATCCCTGTCC
AGGAAAGAGGCGACTGGTCGGCTTGGGAGAAAGAGAAGTGAAACATTCTTTTATCTGTGA
TGTAGAAACAAAATGATTTGGGCCCCCCAAACATATTGATTTGGGACCCTCAAACATATT
TAGGTATTGGCCTTGTTTTTGTCGCGAAATTTTCAGGAAAAAAAATAGTATAGTAGGAGT
AGATGATACAACACATGGACTAGTAGAAAACACGGCTTTCGTCCCAGCTCGATTTACACA
TTAGTCCCGGTTCCCTTACGAACCGGTTCGAGCGGCAAGGGCGTCGGTCGGGCATTAGTC
CCGGTTC