| Morex x Barke POPSEQ 2013 | Oregon Wolfe POPSEQ 2013 | Morex Genome Release 2012 |
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Predicted Genes from contig_47926
| Gene ID | # CDS Predicted | Max CDS Length | Probes in Cluster | FPKM by Treatment | FPKM by Replicate | Top Rice Hit |
|---|
| MLOC_63750 |
1 |
602 bp |
MLOC_63750.1 |
Available |
Available |
None |
| MLOC_63749 |
1 |
529 bp |
MLOC_63749.1 |
Available |
Available |
LOC_Os05g51390.2, FRAME:+3, EVALUE:8e-15, 13105.m05536 protein uncharacterized protein PA4923, putative, expressed |
| MLOC_63748 |
3 |
866 bp |
MLOC_63748.2 |
Available |
Available |
LOC_Os01g40630.1, FRAME:+1, EVALUE:4e-86, 13101.m04159 protein uncharacterized protein PA4923, putative, expressed |
CDS Structure of MLOC_63750
CDS Structure of MLOC_63749
CDS Structure of MLOC_63748
Contig Sequence (9742 bp)
>contig_47926 9742 assembly3_WGSMorex_rbca.fasta
GTCGCCTACGGCGGCGGCGGCGGCGGTGCCACTGGACACGCCCGCGGAGACGGTGCCGGG
GCTGGCGCCGCCGGAGCCGAGCTGCGGCGCCGGGGAGGACCGGGCGTCGCGGTTCCGGCG
GATCTGCGTCTACTGCGGCAGCGCCAAGGGCCGCAAGGCCAGCTACCAGGACGCCGCCGT
CGAGCTCGGCAAGGAGATGGTAACTCACCTTACCCGCGTCTTCTCCTCCCCCGGCTCGCC
GCCGTCTTGCTCTCGGCTCGACCCTGTCCGTCGCGGGGTTCGGGTTCTTGCGGGGAAGAT
GGAGAAAGGGGCCTCCTTTTCCCGCCGATCCCTCCCGGATTTGGTTGGTCGATTTCGGTT
GGGGCCGATCCATCCATGTGGAGGCGCACGATCCTCCGCGTTGGTGGTCATGGGATTGGG
GTGGTGGTGCTCGCGTGCTAGGTAGGTGAGCTGGGCGTACTGCCGTGGTCATGGACATGG
CGAGCCGAGCGACCGGCACCACTCTTGCATGATCGATCATACGGCGAGCGAGCCTGTGAG
CGCACGAACACGACGAGAATCATGCCGTTCATCGAGTCGCCACGGAGGTGGAGCGCGTCG
TCCGGCTCGCCGTTGCCGGTCGCCGGCCATTAATTTTACTTCTTGTTAAATTTCCCCTTG
GCATTTTGGCATCCATGCAGCATCCATCACTTGCTTGCCCAAACGGCCAAGCAAAACCTG
CCATGATTGCTTGCTTGCTTGCATGCACCAAGTTTCAATCCAATTAAACTGAATTCAATT
CGATTCAATGCCATCACCTGACCGATCTGTGTCTGACTGCTCCTTGTGTGTGCGTGCAGG
TGGAGAGGGGCATAGACCTGGTCTACGGGGGCGGCTCCATCGGCCTCATGGGCCTCGTCT
CCAATGCCGTCCACGCCGGCGGCCGACATGTCATCGGGTAAGTCCTTCCCCCTCCTCCAC
CACCACCACAATAAACCACCCCCACCCCAGCACCATCACCATCAACCTCTGCCCGCATTG
TCGCCCTGCCCACACGCTGTACCTCTTCTTTCCCCGCTCGGTGCATACAGCGCCTTTAAT
GGCGTACCAGCCTTCTTGCTCGGTCTGGGCGCTTTGCTCCTGGCTGCCCAGGCCCTGACC
CAGCAGCTCCCAGCTGCCCCAAAATTTGCAGCCTTGTGGAAGCCTCGGGCAGCAGCTGGG
CTCCATGGCACTGCGCATGCCAGTCGCGTAGTACGTCGGGGCAAAGCAAAGCCATGCCGG
TTGCGTTGTGTTTCACAGGAATGGAAGCTCCTTTTCCTACCCTTTCCGAAAGGGTAGCTC
TTCCCATGCCTGGAATGGCCATGGGTTGGGAGCTGGGGCCTCCTCACTGCCCAGCTGCAA
CAAGCAGCTCGGTCACTGCTGTACCACATCATTGCCACCTTTAAGTTCATGCTTTTTTTT
TAGTAGATCAAAATTATTTGTGCGGTGGTTATATTATATGTATGTATGGATTAAAGTTAT
ATTTATAATCATATTATGCTGTGCATTGTCCAGTTCTTGTAAGGCCTAGCTTTGGATGTA
TATATGGATGTGTGTAGATAGATAGATAGCTGTGGCTCTAGTAGGCCACACTCTTGCTCA
GTTTCTTTATCTTTTACATGGGGAAAGATTATCAGCCTGTTGCTCTGCTAGTAGTACCAC
TACTGCTTGTTTGACTGCTTTGGGCTGGAGGAATTAATGTGGCTCTCATTTTGTCCCCTT
TCTTTTTCTTTTTCCTTCTGCCAGGATCATCCCAAGATCACTCATGCCCAGAGAGGTGAG
TCAAAGGCTGCTGCAACCCCTATTCTCTTGCCAATGCCATTGCATGGTCTACTCTCCAGT
TCTGAACCTTGACTGCTGGGTGTGCAAGAAAGCTAGCTGCCAGGATATTTATTGTTTAGC
TTGATGAATGATGATGCATCACCATATATTTGTGAATCTGATGTAGCTGTATCTTCATTT
TCCTTTTCAAGTAGCTTGTCTATATTCTAAGTTAATTATTTTTTCACGAAAATATATTGC
TATATTGACACAACTAGAAATAGTACTATTTTAATACATATGGAATCTGCACAGATCTTG
TAGGAAGGAGTAGTAACTTGTTAGCTTCTTAGGCTTATGTTCCCCATCTTTTATATGGAT
TACCATATGCAAAACACTATAAGGAGTAACTTGTACTCTTCTTGATTAGGCTTAAATCCT
CATTTGTTATATGGATTAGCAAAGTAATTAATTTTAAATTGTCAGGCTGGCTGTCTTTAT
TCTGATTTTCAAATATGCAAGATGATCTGTAGTACTTAGTCCAGCCTTAATTAATTTGAC
AGTCAAGATCGTTATTCCTGGAAATTTTGATTAGACAGACTAGTTAATTTTACACTTAAG
TGTTATCTGTGGATGCAGCTGGATTATATTACTACTCTTGAGTGCTTCGTTGCTTACGAT
CCCTGATTCATGCTCCTGTAGGTAACTGGGGATCCTGTTGGTGAAGTTCGAGCTGTTTCT
GGCATGCACGAGAGGAAGGCCGAAATGGCCCGGTTTGCTGATGCTTTTATTGCCTTACCA
GGTACCAATTTTCTATATGCGGGCAAATCTGGAATAAATCATACATATTTTGTGCTGGAG
AGTTTGAAAATCCAGTTAATTTGACAGGCGGCTACGGAACCTTGGAGGAGTTGCTTGAAG
TGATCACGTGGGCGCAACTAGGAATACATAAGAAGCCGGTAAGAATTAGCTGCTGTTCTT
GGTGCTTTTCATGCAAAAAAATCATACAACCCCAATCATCTGGGGATGATGTGCTTGTCT
GCATATGTTTTGTCAACCCACACTATTTTAGTAGCTAGGTATGAACGCGTTCTTTGTTTA
TTATAATGTCGATCGTTAGGGCCGTTGTGATCTGATCTTACCAGCTTTGTTCACATGTGG
CTACTAATTAAGTTCACCCATACGGCAAGAAATCATCGTAAAGAGGGTTTAATCAAAGGA
GCTATCAGCATCACTTGGAAGGCATGCAATCTGCATTCCCGACTTTAATATTCGCTCCTC
TAATAGGATGATCCTGCACATTTCATGAATATTCCCATACAGCTACCAAATCAATGTTCT
GGGATCAGAAAAAGGCATGATGTGTCATGTAGAGGAAAACTGTATTGCTGTCTCTCTGTT
GCACAATTGATTAGCAATAATATAAAATGCTGAATGTTTGAGGGGATAGACACAGCAGTC
AGTTCTAGATTTATCTTATATCCCTCCTGTCACTATTATTAGATCTGCAGGCCTGCCAAA
CTTGCTATTAAGTTGTCTGTTGATATCAGATACGATTCTGTGGGTGGGAGTGTATCATTC
AGTAATCAGCACTGTTGCACTTTTCTGTCACTACTTGTACTTATTCCTGGGGTATTCTCT
TTTCTGCAATCGCGTATCAGGTCGGTCTGCTGAACGTTGACGGATTCTACGACCCACTGC
TGTCGTTCATCGACGTGGCCGTCAACGAAGGCTTCATCACCCAGGAGGCGAGGCAGATCA
TCATCTCGGCCCCAACAGCCAAGGAGCTAGTCATGAAGCTGGAGGTCAGACCCAAATTCT
TTACTATTGATCAGTTTTAACCACCCCAACTCTGAAACTGGAGTTTCCTTTTGAAGTCCA
AATGCAAGTTGGTTATACGGTCTGCTTGCTTGTATGATAACCTAAACCCTTCACAACATC
CATGTACCTTGTGCAGGAGTACGTCCCTGAGTACGAGGTCGGCCTTGTCTGGGATGACCA
GAGCCAGATGCCAAGCAACACCCTGGTCCCGGAGCCGCTGGAGACTCCCGCAATCACATA
GTCCTGATCAATGGGCGTCGCCTACATTTCAGTTAGGGTTCTAACAACAGTGTCCTAGAT
AAGACCTAGCTGTGTGAAGGGCGAAGAGGGGGCACATTATAGCCTGTGTGCTTGTTTTGG
TAGCGTCGATCGACCGGTCTCTTGTGCCACCGCTGATGATTGTTTTGGGTGGCATGATTA
TATTAAATTAAAGTAACTAGTGAGTGGTAGCATCCAACTTGGATGGATTGTTGAATGGTT
CATGGTTGGATGGGCTAAGCCGCTGAATCGGTCCTGCTGTGATCCTGGAACAAGGGTTGA
CTATATATAAATAGGTACCAGCACATATAGTTTATCAACAAGGTCTCCTGCCTGCTTGCT
TCCTCGTGCTGCATTGTGTACGTTAATCCTTTGCTGTTTCTTGTTAACTGTAAATGCTGT
CTCTATCCAAGGTATCAAAGAGATTACAATTCTACTCAGGTTTTATTGATCAAATCATAT
AACATCTGTAGAGAAGTTTTGATGATTTTCGTCATGGGGTCTTCTGTGGTGCTATTTGAA
ATTGCTCTTTTTAGTCGACTTTAACATATGTTATTGAAATTTAAAATTGCGCTCTGTCGA
GGATCTCCATCTTCGGCTGGGAGGCTCAAACCAGCACACATGGGCCAGGCCATCTTATAA
GCTTGAGAGCAGTGTAAAAACAACAAAATAAAAAGCTCGCGAGCAGGCCCAGCCCAAGTA
TGCTCCTTGACACTTTTGCCTTGATTTCTTTGAGGTCTAGGGGTTCTGTTTTTATAAACA
ACAAGTTCATTTTACCCCACAAAACCCACTCTTTGGTCCCAAAAAACTAAACCCACTTCT
TTCTTCCCTTCTACTGCCTATGTTCCTAAATACTTGTTGGAGAAAACTAGATTAGTTCTC
TCCAACAACAAGTATTATGGTACAAAGGAAGTACTCCGTATTTGTGAACAAACTTATGTT
TGGAATTGACCTTATTTGCATGCCATTGTTTATTTTTTAAAATTTTAGTCAGGAACTTAT
ATATTCATAACGTTCAGAAATCTTTTTATTTTGCAGGCTGAATTTTTTTATTCTATAATA
ATAGGGTTGCAGTCGAGAGGCTGAAACTTCTCAATACATGGTGTTACTACTGGTAGCTAT
ACCGCAGTGCTACGCTCAGTGCGACTGTACGAAGCCAACCAATCTCCTACCCTATTTTGT
TCATGTTTAAGCTTCATAGGAATACATTATCGCTCTGCAATCAAAATCCGAATCTCCGCC
ACAAGATGACCATAAGCTGACCTTAATAAACCCTCGCCGGACTACATATAAATGGAAATA
TAGTTTATCAACAAGGTCTACTGCCTGCTTCCTCATGCCGCATTCTGTTAATCCTTCCTG
TCTCTAGTGCAATGCCTTTTGATTCTTGTTACTGTTAATATTGTCTCTATTATAGGCATC
AAAGAGATAACAATTCTACTCAAATTTTATTGATCAAATCATATAACATTTTTAGAGAAT
TTTTTTATGATTTTGATCATGGTGTCTTCAGTGGTGCCATATGAAATTGCTCCTTTTAAT
CTACTTTTAAATATGTTATATGAAATTTACAATCGCCTGTTCACTCGTTCCTGGATCATC
TTTGGCTGTCAGACTCAAGCCAGAAGTCAGATTGAGCACACATGGGCCCCACCTTATAAG
CTCGTTGAGCAATGTTAGAAAAAAAAAGTTCGCGAGCAGGCCCAGCCCAACTAGGCTCCT
TCACCTAGTGGTTCTGTTTCTTTAAACAACAACCACTGGTTTTATTCTAAAAAAAACCCC
CCACTTGTTTTACCCTAAAAAATGCACTCTTTTGTCCCTTCTCTTTGGGAACAAACTTAT
ATCTGGAATTCATGTAAAAAAACTTATGTTTGGAATTGACCTTATTTGCAGCCAATGTTT
TCCATTATTTTAGCGGGGCACCTGATATATTATATATCGTAACATTCATCAAACATAATG
TTGAAAATACACGCTAGTAGCACATACAAACACGCCTTACACACTTTATTACCTCACCCC
TCTTTTGCCAAGCAATGTGTCGCATCATTAGAAAGCATGCTGTAAGAGTGTAAATATTAT
ATTATTGATGAGTTAGGCAAGAGAGAAGAGAAGAGTGAAGAGAAACAGACTATAGATTAA
GAGTCAACTACAACAGAAACTACAAGGAACTTGTAAGAATGTAAGATGAGACCTGTATTA
ATAAAGCATAACATCTCTATAGCTAACTACTATACATGCTGACTATTAGATGTCGATGAT
ATGATGACAATGAGATATAGACAAAAACTGCTACATTATTATCGTTGCTATTAGCAGATC
GTCGTGCCCATCGTACCCTGAACCCCTTTCTCTGGATCTTAGCAACTCCTTAACTTCCTT
CATAAGCGGACCATATGCCGACCTGTTTATTTGTTGCGCGGAGTGTGGATACAATAAAAT
GAATCTCAGAATATTTATCCTTAGGTTCCATCGAACACCTCGGACACAAGTCAACAACCT
TCAGATCTATTCGGTGTTTTTTTCGTCAAGTAGGCAGTGAATTAGTAGCCACTCTCCGAG
CAAAGTGTCGGACTGTCGGGGGAACACCACATGACCAAATTAGTTTCCAGCAAGTATGAC
TCCCATCAGGCCGCGGACTGGAGCGAGTAGCTGAATCCCTGTGAATCCCATCAAAGGCCA
ATTGGTAGGCAGATTTGACTGAAAAAATGCCATACTTACCCGGCCATCAGGAAAGTATGT
CGTGCTCTAGACGTGGAGGAACACGAATTTTGATGATCTCAAAGTCATCTGAATGCAAAA
AATATTATTGTAGGATCCCAAGATTCCATGCACCATTGTCATTGAGCAATTCAGACAGAA
AGCGGATGCGACAAGTACCCTGTACCATAATGGGTTTATACGAGAAGGGCCTGGGTATCC
AATTGTCGTGCTAAACACGTATACTTCTATCATTGCCCACTCTCCATACAAGACCCTTTT
GCAATAGTTCAAGCCCATAGCTGATTGCCTGCCAAGAAGATAATGCATTACCGGTAATGA
CTGTGTCCTCCAGTTTACCTTGAGGGTAGTATCTAGCCTTAAAAACATGTGCACATAGGC
TATTAGGCTTGGATATTAGTCTCCATGCTTGTCAAGCTAAGAGAGCTTGGTTAAAGAGAC
GCAAATCTTGAAAGCCCACACCCTCTCTATCCTTTGGTTGCATTAAATCATCCCAAGAAT
GCCAACGCACTTTCCTTTTTCCATTCGCTGAACCCCAATAAAAACCTCTCACCATTCTTG
CAAGTTCACCACAAACCGAAACGGGTAACTTGAACACTCCCATAATATATGTGGGCAATG
CTTGAGCTACCGACTTGATGAGAGTCTCTCTACTGGGCTGAGATAGGTGTCCATCACCCC
AATGGATGAGGGACGCGGCTTGCCTGCGGCCGCTGCGTGCGACCATCCGTGCGCCACGCC
CATCGTATGGCTGTGTCTCCACGTACTCCCCGCTCTTGACTTCGAGTGGAAAAAAAACAA
AAATACACAGCATAATACCGACCGATTCCCATCCCAGTTCTATCCACATCTTTCCCCTTC
TGTGTGTAGTGAACCTCGAGCTGAAGCTCGTGCTCCTTCAACCTCCAGCCACCGGAGCTC
TCCAGCCGTCTGGATCTCGTCATACCTCCGTCCGGCGTCCACCTAGATGAGCTAGCGCGT
TCGTGTCCCCATTCTCCTCCAGCCGTCCATTCCCACCAAGACCATACCTCATCCCGCCTC
GGCTAGGCTGGCCGCCGCCAGCGTGCGCGTGCGCTTGCCTGAATCTGACCTGCGTCGCTG
CTCAAAGGTCTCGGTTTCTTGCTGATCCTATACCAATCAGTATTTGATTTAGTTATTACT
TTCGAGAAACTATATGCATTGTAAAAGGAATAAAAAAACTGCACGGATGCTTTCCAGGAA
CTGAAATCAGAGATCCTACAAGAACGGCTGCACATGCAATTAAGAAAAGAACTAACTTTC
CATCGATGTTTGGCATCTGCAGGTTATGATCGGTTTCCGTAGAAGCTTTACAAGGGTGCA
TCATGCTGCTTTTTCCCGTCCAACACTCGAGATCATGATGCAGTTAATTGAAAGATTCAC
CGTCAAGAACAGAGTCAGGTTTCTTACTTTCGGTGTGTGAGATTGATCGTCACCCTCCTG
GTTCCCCGGACCACTCCTTGGAGAAGCCATGGGGACGCAAGACTTGGAGATGCCATTAGG
GACGTGGATTACTTTGCTGCTCAATTCAAAAAAGGACGCTATTGATTATAGTAAGACCGT
AGGTTGCTCCTGCCTCCTATGAACTACATATTTGCATTTTGGCGCGCTTTTGTATATGTT
GTGAATCTGTTCGCAAGAAGGCGGGAGATTGGATTGTTCCCTACAGTTTTGCTTTCTATT
TTAATGATGAGAATATTACGAAAAAGAATTTGTATTAGGATGTGTATTTTGTTTTATTTT
TTCGCAGAAATTCTGAAGCGGGGCGTGCGTGGAGCCACAACCGTGCGATGGCTGGGCCGC
ACGGATGGGCGCACCCAGCGGCCGCAGGCAAGCCGCGTCCATGGATGAGTCGTTTTGTCA
AACTCATTTGTAGATATTGGAATCTTCCTTTAGACATTCGACCATCAGCTGTTGGAAGAC
CCAAATATTTCTCCTCAAAAATCAGGCTAGTAACATTCAGAACCTCTCTTACTTCTTGGA
CACCAAAGGGACAAGAGTTACCAAAGAGGATCGATCACTTATTTAAATTCAAGCACTGTC
CCGTGGTATTACGATAGAGATCCAATCATCCAATGCATGCTTAATCATCTCCGCTTGGCC
ACGAGATGCCTCAAAGAATAACATAGTATCATCTCCACTTTGATATGGGGTGTGAGTATG
CGGCCCAGATAATTTATACCCCTTCATCAAGTGGATAGAAGTAGCGACACATCTTGTCAA
GATGGTGGATTCAGAGAAATTGATGTATTACTTTGTAGTTCTTATTGTATAATTAATAAA
ATGGCTGCCTGCATCGTCCTGATGCAAAGTCTGGGGTTCATCCTCCTTTTTGAAAAACAC
AGGCACCATAGTATATATTTCACTGAGTATAGAACTAGTCAGTCTAATTGCATCTTCCTT
CAGGGAGATGCGAACTGCTTGCAACAGAAGCCAAGCAACAACCTAGTCCCCGAGGTACTC
GAGGCCCCCGTGATCACCTCTTCCTTTTTTTAGATAAAAGGCATACGCCCGACTTTATAG
ATAAAGCCACCAGATAGAGTAACAACGCACATAACAGAGAGATAGAGGTTTAAAAGGCAC
CCAGGCCAAAAGGGGAGTAGTTAGTTTAAGGGGCACATGGCACGCATGCCCCAACTACGA
CACGCAGGCCGGCCCATAAGCAACATCAAGAATAAGGTGGCACGGCCTCCAAGTACGCGG
CCACCAAGGGGCTAGGCAGCGGGCTCCTGCCGCGAGAGGGAGGAAGCCCTGGCCCGAATC
TTGGGTAGCATCAGGTCGAAGCCGACACGATCTTCAGTTTTAGTCAATAATCTCCACTGT
TGCAAGAACATGCAAGCTTTATATAAACAATCAACATGTTTGGACGGAAAGATATGTTCA
ATGGTAAACTTGTTCCTAGTGTTCCATAATGCCCAACAGATCGCCGCAAACCCAATCCAA
AACAGACGTTTCGTGGCCCCCACCAAAGGTGCGAGTTGTATTCTGGAGTTTGATGTTTGG
GCGGATGATGAGCCTCAAGGGGTGCCTCTGGACCAGGTCTGGGTTCGCTTTTATGGTGCT
CCGTCTAAGGCAGTTAATGATTTTACTGTGGCTTGGAGTTTTGGCTCTCTAATTGGTAAA
ACGGAGCAAGTGGATATGGTGT
