Contig Data
morexGenes
Links



Map Locations of contig_47899 (9265 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map locationNo map location




Predicted Genes from contig_47899

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_63726 6 3580 bp MLOC_63726.1 Available Available LOC_Os06g03970.1, FRAME:+2, EVALUE:0.0, 13106.m00343 protein receptor-like protein kinase 5 precursor, putative, expressed





CDS Structure of MLOC_63726






Contig Sequence (9265 bp)

>contig_47899 9265 assembly3_WGSMorex_rbca.fasta
GGACGTGTGGAGGCGGCGTGTGTCGTGGTGGTGGTACTTCGGCTGGCGGCGGCGGCGGCG
GAGGGGGAAGACCGAGGAGGGGACGGGGAGGCGCTGATGGACGTCAAGGCGGGCTTCGGC
AACGCCGCCAACGCGCTCGCCGACTGGGACGGCGGCCGCGACCACTGCGCCTGGCGGGGC
GTCGCCTGCGACGCCAACTCCTTCGCCGTCCTCTCCCTGTACGTCCCCCCTCCCTCCCTC
CCTCCCTCCCCTCTTCTCCTGCTCCTCCGGCCGGCATTGCGAACGCCATGACGACAAGCT
TCTCCCTCTCCGTCGTCTCGCTTCTCGGCCGCCGCTCCTCGCCGCGTGTGAAAGATGTTG
GCTTGCTCTTTGAAAGCAACCCGCTTGCTCTGCATATCTGGATAAAAAAAAACTGTACTT
TCTCTTTTCTCATGGGATTATTCATTCGCTTCTTCCTTGCATAATCATCTACATATTTGT
TTCGCTACTTATAAACGAACTAGTATTATCTATCTCTGACGGCTGATTGATCTTCTCCGG
TGAAAATAAAAAAATGCAGGAACCTGTCAAATCTGAACCTGGGAGGGGAGATCTCGCCGG
CGATAGGGGAGCTCAAGACCCTACAGTTCCTGTACGCACACACCACCATCCCTCCCCCAT
CCCCATCCCCATCCCCCTCCTTTGCATCTTCATAAGATTTTGTGCCTGAATCTTCCCCTC
TCTCTTTAAAAATATCCATCCGATTTGACCCATCATCCCGTGATGTGACAAGCCTCTTTA
CTATTCTATCATGCCTACCACGCCCTCCTAGGAGTAGATTGGATTAGTTTATCTCAGCCC
TAATGATTTGCTTCCTTTGCTTGCGCAGGGATCTCAAGGGGAACAAGCTCACAGGCCAAA
TCCCAGATGAGATTGGGGATTGTGTCTCCTTAAAATACTTGTACGCCACCCAATCCGGGT
CTTCTTTTATTCTTCTATATACTACTCCTACCTTTTTGCTGTAGACATGGATGATTCTTG
TTTATAGTATTTTTATACCGGTTGACATGTGCCTCTTCTTGTGTGTGTGTGTCCTACATA
CAGGGATTTGTCCTTCAACCTGCTGTATGGAGACATCCCCTTCTCCATCTCCAAGCTCAA
GCAACTCGAGGATTTGTAAGCACTGGATCATCATTTGTTTATCTTGCCTGCCTTTTAGCA
GAGACATGCCTTTTTTTTCTGAGATTGTGATCACTTTTCCACCCATCTTTGGGTTGTTTT
GGGTTATCCCAAGGAATGAGAGGCTGCTTGCTTTTATCTGCTTTTTTTTGTATTATTTTT
TTTGGGCAAAGTATGTTTTGGGGTTATAACTGCTATGAAACTAGTTTAAGTTTTGCTTCT
GTGTGGTTTGTAGATTGCAGCCAAGTTTCTGTGGTTTAGAGTGCTTGAGTTATGATGTTT
CTTTTTCTCTCTTATTATGGCTGCAGGATTCTGAAGAACAACCAGCTCACGGGACCCATC
CCTTCCACACTGTCCCAGATTCCAAATCTCAAAATCTTGTGAGTTTCCTAGTACCTTTCT
TTCCCCGTGACTCTACTTATTATGGGATTCTTGGGAAGACTTGATGATCTTCCTTTTCTT
ACCTACCCTTTTGTGCTGCCTAAAAAGTGTTTATCGTGGGGGCATTTTCCTTTTCTGCCC
CATGTGGTTCTTGTGAATGAGATGTACAATTGTTTACTTGGAACAGAGATCTTGCCCAGA
ACCAGCTCACAGGGGACATCCCAAGGCTCATCTACTGGAATGAAGTTCTACAATACCTGT
AAGAAGTTCCCCTGCATCATGTTATTTTTGCTTACTGATTCGCTCGGCAATCGGTATAAA
AAGAAGATGCTGACATTTTCATCCTCTTCATTTTTCAGAGGTTTGAGGGGTAATTCACTC
ACCGGAACCTTGTCACCTGACATGTGCCAACTCACTGGCCTGTGGTACTTGTAAGTTTTG
TTCTTACTTGGAGATGCTGCTTTATTATATCATCATGCAAACTGATATTAACGGTACTGA
TATTTCTTCCAAATCCGCAGTGATGTGAGGGGAAACAATCTCACAGGAACAATTCCAGAG
AGCATAGGGAACTGCACCAGCTTTGAGATTCTGTATGTTGCTTGCTAAGATTTTATTGAT
GTACTGGTGCTCATTTGTCAGGATATTATTGATTGAATTTGATTTATGGAACACAGGGAC
ATTTCATATAACAAAATCTCTGGAGAAATACCTTACAACATAGGTTTCCTTCAAGTAGCT
ACACTGTAAGCCTCCTGATTTTACTCAAATTCTCTATACTTTAGCTTATCTGCACTAGTG
TGATATTCTACTCTGTTATAATTATTCAGACTTATGCTAAATGCTTGCGTTTATCTTTCA
TAGGTCGCTTCAAGGAAATAGACTGACTGGGAAAATTCCAGAAGTGATTGGCCTCATGCA
AGCTCTTGCTGTTCTGTGAGTAAAACACAACACTTTTCTCTGCATAGGTCTTGGCTGATG
AAATATTCGATACTGACTTTTTTGTGTCCAATTCTGTTCTTAGTGATCTGAGCGAAAATG
AACTAGTAGGGTCCATTCCTCCGATACTCGGCAACTTATCCTACACTGGCAAACTGTTAG
TATCATTTGTAAGACCTGATTTTTCACTGAAACAATGTTGCTTTTCTATTAACACTTTCT
GGGTCCATTTATATTCAGATATCTACACGGCAATAAACTTACTGGAGAAGTACCACCGGA
GCTTGGAAACATGACTAAACTTAGCTACCTGTAAGTGATTGTTATCTGATGTTGATAATA
CTTGTACTCCAATTGGTTTGAAACACTGTCTGAGGTTTAGAAATTGTTCAATATAGGCAA
CTGAATGACAATGAATTAGTGGGCACAATTCCAGCCGAGCTTGGGAAACTTGAAGAGCTA
TTTGAATTGTAAGGACAGGTCTTTTCGTACAGATTAATAGTTCTTTTTACCTGAGCAATT
CTTGACCCGTTGTATCCTTGTCTAGAAATCTTGCCAACAACAAGCTTGAGGGTCCTATTC
CTACAAACATCAGTTCTTGCACTGCTCTAAACAAATTGTAAGTTATAAAGCTAGTGTCAT
TTTTCCCGAACCATGAATATCTCTATCTTGGTGCTTGACGGCTATATTTTTCAGCAATGT
TTACGGCAATAGATTGAACGGTTCTATCCCTGCTGGTTTCCAGAATTTGGAGAGTTTGAC
TAACTTGTGAGTACATGCGTTTGTCGCATTTTGCTCGCATTTTTTACTTAATTCATATTA
CGCATTACTCAGAATCTCATGAATTGTTCTTGTTCCAAATATGGCAATTACAGGAACTTA
TCCTCAAACAATTTTAAAGGCCATATCCCATCTGAACTTGGTCACATCATTAATTTGGAC
ACACTGTAAGGAGGTCCTTGTATCTATATTTAGTTACATGTTCCTACTGCATCTGCTTCA
TTTTCTAATATCATTGTCACGCTTGTATCTATATTTATTGGTATTCCTTTGTTTTGGCTT
AGGGATCTTTCCTACAATGAATTCTCTGGGCCAGTTCCGGCTACTATTGGTGATCTTGAG
CATCTTCTTCAATTGTATGTTCAGTACAAGCCTCTTAAAATTTGTATTTAATCTCCTGTG
GTCATTATTTCCTGATGTTCAAAATTATGAATGTAGAAATTTGAGCAAAAACCATCTTAG
TGGATCTGTGCCTGCTGAGTTCGGAAACTTGAGAAGCATCCAAGTAATGTGAGTAATCAC
CCTGATCATGCGTGTATTAAGTTCTGTTGGTGGTCATCTGTTGTCATGATTGATGATGTT
CATTCTCATTTCAACATTGATAGTGATTTATCCAACAACGCCATGTCTGGTTATCTCCCT
GAAGAACTAGGCCAACTTCAGAACCTTGATAGTTTGTGAGTTCTCTTTCATCGTGCTATT
AGTACGAAGTATGATATTTGAAATCGGTGCAAATATTTTACTGAGCTGTAATTTTATCAT
ATATATAGGATTCTTAACAACAATACTTTGGTTGGGGAGATCCCTGCTCAGTTGGCTAAC
TGCTTCAGCTTAAACATCTTGTAAGTTTTTATTTGCCAGCTTCGCCCTGCAGTATTGGCA
ATTACTTAGTCTGCATTAGCTTATTGATCTGTTTGCTAACTGCATTGCCGATGAGATTTT
TCAGGAACTTGTCATATAACAACTTTTCTGGACATGTCCCATTGGCTAAGAATTTCTCAA
AGTTCCCCATCGAAAGGTATCAAATGACTCCCATCTACCCTGTTTGACGCCCCTCTTTTA
CCACCTTATTTTTGCTGATACTAACCAATACCTGCACGCAGCTTTTTGGGAAACCCGATG
CTGCGCGTTCACTGCAAAGACTCCAGCTGTGGTAACTCACATGGATCAAAAGGTATCAAC
CAAGTCATAAACTAAAGTTAGGTTTTCATTCAGTATGCTTTTAAACTCATGTTTAGGTAC
TTCATGTTCCAGTGAATATTCGGACAGCGATTGCTTGCATCATCTCGGCCTTCATCATAT
TGCTCTGTGTTCTGCTATTGGCAATATATAAAACAAAGCGACCACAGCCACCTATCAAAG
CATCTGATAAACCAGTGCAAGGTTTGTGTGCATCCTGTGTGTTAAATTGTAATCTATCCC
TTGCCATAATGGCACTCATCTCAATGTTTCTTAATCATGTTCAGGACCTCCAAAGATAGT
ACTCCTCCAAATGGACATGGCTATCCATACCTATGATGATATAATGAGGCTAACAGAGAA
CCTAAGTGAGAAATACATCATCGGCTATGGCGCTTCAAGTACTGTGTATAAGTGTGTGCT
CAAGAGTGGCAAGGCCATTGCTGTGAAGCGACTCTACAGTCAATACAACCATGGTGCCCG
GGAGTTTGAGACGGAACTGGAGACAGTTGGTAGCATCCGGCACAGGAATCTTGTCAGCCT
TCATGGTTTCTCACTCTCTCCAAATGGAAACCTGCTCTTCTATGATTACATGGAAAATGG
TTCCTTGTGGGATCTTCTCCATGGTAAGGACCAGCAACATTTTAATTCACCTTGTTTTCT
TCACGCGATTATGGTCTGTCTCACAAGCATCTGTCTCATGATCTGTGATCTTTTTCAGGT
CCATCAAAGAAGGTGAAACTTGACTGGGACACCCGACTGAGGATCGCCGTCGGTGCGGCG
CAAGGGCTGGCCTATCTTCACCATGACTGCAACCCTCGGATAGTCCACAGGGACGTCAAG
TCCTCCAACATCCTCCTCGACGAGCACTTTGAAGCGCATCTCTCTGATTTCGGCATCGCC
AAATGCGTCCCAGCTGCCAAGACACACGCGTCCACCTATGTGCTAGGAACCATCGGCTAC
ATCGATCCGGAGTACGCCCGGACGTCGAGGCTGAACGAGAAGTCCGATGTGTACAGCTTC
GGTATCGTCCTCCTGGAGTTGCTCACCGGGATGAAGGCTGTCGACAACGATTCCAACTTG
CATCAGTTGGTAAGTCTCAGATCATATTGGTGCTGTCTTTTCATTGCATTGTGCAATTCA
CGCATCTGAATGAAATGCAACCATCGTTTTATCAATCACATTATGGTCTTCAGGGCATGG
TATGATCTGAGCACCCTGTGTGTGTGCGTTTGTGCGTAGATAATGTCGAGGGCGGACGAC
AACACGGTGATGGAGGCGGTGGACTCGGAGGTGTCGGTGACGTGCACGGACATGGGGCTG
GTCCGGAAGGCGTTCCAGCTGGCCCTGCTGTGCACCAAGCGGCACCCCATCGACCGTCCG
ACGATGCACGAGGTGGCCCGGGTGCTGCTCTCGCTGATGCCGCCGCCACCCGCCGCCGTG
AAGCCCTCCTCCTACGGCAAGACGACGACGGACGCCTCCAAGAAGGTGGACTACACGCGA
TACCTGGCGGCCGCGGCGACCCCCGACACGGACCACGGCGACAACAGCTCCTCCGACGAG
CAGTGGTTCGTGCGATTCGGCGAGGTCATCTCCAAGCACACCATGTGACCGTGACCATGA
CCGTGGCACGACGCCCCCCAAAAACTTCTCCTCCCCAAGCTGTAGCATAGCGAGAGCTGG
AAGTAAGAAGCAGCATCAGCTAGGAAAAGCATAGCAGAGCACAGTGCAGGGAAAAATAGT
TGTGGTAGGGTTTCTTTCCGAGTAGATGGACGGACGGCGCCATTGTTCTTCTTCTTCTTA
TTCTTCACCCCTTCCCATTTTGTTCTTCCTGATGTTGGTTATCAGAGGCGCCATTAGAAG
TTCAGAACATAACCAAGGCGTAGGATGTCAGCTGGGAGAGGAGACTTCTGGCCTCTGGGG
CATTCATGGCGTGGATCAGATGAGATTCAGAATCATCAGAGACGTCTCGTGAGCGCCTTG
AAAGCCCCATGCTCTGGCTGGATGATGATGACGACCGGAGAGATACTGCTGCTGCTGCTG
CGACGATGATGGGGCTTGTTGGATCCTGTTAGCGCATTGAATCGAATTGAGCCTGCTGGG
CAGCAAAGGATTGTGCGATGGATGTGTGTAAATGCGTGTCCTGGTGCTGAATCAAATTTT
TTGACGGTATTTATGAGTTTGCTTGCCTGCTCTCTGGGGTCTCTACTGTGGCTGCCTTTT
TGTACGGTGGCGGTTTGATTGTATTTCTTCGTCTGAATGAATCTCTGGTCTCTGATATGT
GTAGCCTGTAGAGTAGCTGCTGCCTCTGCTGGTGGCTTGTGGTATGAATTTTTTTACGTC
TGTGTCGCTGCTCTGCGTGCATGTCAGATGGAGCAGTCGATGTCAATCATGCACGCGTAG
CTCCTGCCTCTCTTGATGATGCGCAAACTTTCGCATTCAATCGCTGGGGAAACGATAAGG
CTTTGCTAAAACATGTAGTACTCCCTTTATTTCTCATTTTTATATACAAGATCACAAACT
CAATGAAAATGAATGAAAAAAGTAACATGCATCCAAATATTAAATAGGTTGTTAGTACGA
AAAAAGATCATTAATATTGTTTCGATTTCTGTTGATGGCCTTGTACAGATGCCTTCCTTA
AGTTTTTTTTAGGGCAAGATGCCTTCCTTTAGCTAGTGTGGCTAGCATGCACACATTCTG
CTTATCATGCATAACTGTTATTTTCAGCTGCCTGAAGAACCATGTCCAATTTTCGATGTT
CTTACTCTCCACACAAGCAAATGCAAGTGGGACGACTTGATTTTGGCCATCTTGACCTAT
GGCTGTGAGGATCTGATCCTTATACTTGCAAGTGAGAAAAGTACCATCTACACATATCAC
CGGTCGACAATGTGTGAAAGCTTCGATGCATACACCGAAAGAGAAAAACAACCGATGCAA
CACCCTAAAAGTTGGGAATTCTAGCAGATACAAGTCTTGGATGTCAATATAGGTGCCAGG
ATTCCGGTTCTGCAGTGTCTGGAGGAGCCGAACAACTGAGTCGTATGCATCGAAATACGA
ACCAAATCTGGTCGCAAGTGCCTTCTGCTTGGCCCTCCAAGCCTTGCCATATGATATGTT
GTACTTGAACCTCACAAAGACTTTCTGTGGATAGCCTTCACTTCCATCGCCTTGCTCTCC
ACTATCTTGCTGTAAAGCAAGCGAGCAATCACCGTGGAAGCAAGGTTAGGATGATCGTGG
GGGATACATGGAATAACACAAGTATTACTAACTATGTCACTTATGACCCAACTTGTGTCA
TACTTAGGGAGATAGTCATGCACCCTTGCGGGACAACCCTGATTTCTGCATACCATTGTC
AAGTTTTTCGGACTTGAAACTTCAATTACAAAAACCCTTTGAGTGAACATTGCCCAATCA
ATGAAGGCATCCTTCACAGCTTATTTGTTTGGGTAGAGGGCACCTGCGCAATGTTGTTTT
GGTGATACTGCCAGGCAGAATCATAACCGTCGTTCACCAACATTGCAGATGAGATGTCCT
GATTCCATGTGCGTTCTCTTCTTCATCTGACTCGGCGGAATCATCGGAAATATCACCTTC
TATATCTTCTTAATGCATCTGGTTTTGCATGTTTCCATCTATCTCGTCAGCATCCGCCTC
GCCGCTGACATAATCATCTGAATCTCCTCCTTCCGCCTGACTACTCTGGTCTGCTTCGTA
AACATCATCTGCAGCATGGGACGCATGGATTGACTGTGAATCATGCATCCCTTCACTGCT
CTGACCATACTCACCGGCTTTAGCACGGGGAACAGTAAGGCCATAGGATTACATCCCTAC
GCTCGCAAGCTTTTAACCAGTGCACCCATTGGTCATCTCGCTCTATATGCTTCAAATGCC
AGAAAATATTTGCACTCGGCCGGGTCTGTAATGCATGAACACCGACGGTGTGTGTTTGAA
TATTGAACCCTAAACAACTGGCCAGCCATTCTGTCAAGTGACTAACGGACCATGTCTCAG
GGGAAGTCACTGGCACCACAACGTACTGAAATTCACTAAGATCAGCTCCATCTCATTTGT
TTGAACAGTACCATGACCATAATGCAAACATAACTTCACTAAATCAGACATCTCTTTTTG
ACCTAACAAATTATTCAACAAGGATAAATTTTAGACGAAGGACAAACGTAATATATTTCC
CAAATCTATTGGAGATCCTAAAAATATTTAAACTACTTAATTGACACGCCTAAATATATA
CAAATCTAACAAGAGAAACTAAAAATATTTAAACTACTTAATTGACACGCCTAAATATAT
ACAAATCTAACAAGAGAAACTAAAAATATTTAAACTACTATATAGACTGACCTAAATATA
TTAGATTGTACCGGACTACCTAAAGAAATTTAAACTACTTAATTCACTAACCTAAATATA
TCCAAATCTACCGTAGCATCTAAAAATATTTAAAATACTTAATTCACTAACCTAAATATA
TTCAAATCTACCGGAGCACCTACAAATATTTAAACTACTTAATTCACTAAACTAAATATA
TTCAAAGCTACCGGAGCACCTAGAAATATTTAAACTACTAAATTGACAAACCTAAAAATA
TTTTACCCTTGAAGCATGCGCAGAAACGACGAACGACGTTCGACAAACACCGAAAAAATG
ACGAACGCAGCAACCACCACCACCACCTCCAACTGCACCACAACAACCACCTTCACCCAC
ACCTCCACCACCACCACCTCCACCTGAACCTCCACCATCACCACCAAAAAAGATTGAAAA
ACACCACCACGAACTACCCCATCGC