| Morex x Barke POPSEQ 2013 | Oregon Wolfe POPSEQ 2013 | Morex Genome Release 2012 |
|---|
| No map location |  |
No map location |
Predicted Genes from contig_47889
| Gene ID | # CDS Predicted | Max CDS Length | Probes in Cluster | FPKM by Treatment | FPKM by Replicate | Top Rice Hit |
|---|
| MLOC_63716 |
3 |
1757 bp |
MLOC_63716.1 |
Available |
Available |
LOC_Os11g48040.1, FRAME:+3, EVALUE:0.0, 13111.m04801 protein mitochondrial carrier protein, putative, expressed |
| MLOC_63717 |
2 |
795 bp |
MLOC_63717.2 |
Available |
Available |
LOC_Os02g32200.1, FRAME:-3, EVALUE:1e-46, 13102.m03480 protein thioesterase family protein, putative, expressed |
CDS Structure of MLOC_63716
CDS Structure of MLOC_63717
Contig Sequence (9482 bp)
>contig_47889 9482 assembly3_WGSMorex_rbca.fasta
GAATCTGGATGGTACCGAGTTGCACTAAATGTNNNNNNNNNNNNNNNNNNNNTGAGACCG
ATATATGAATCTCGGTGTTACCGATACGATGACCTAGGGGAGTTTCCAAATCTCAATGGT
ACCAATTGCAATCTCAGAATTTACGATTCTTGAAATAGAGATACCAAAAAGTTGGTATTA
GGGTTTGGCAAAGGACCTATCACTCGGAAAATTAGTAGGGCCGAATGGAAAAACTCGGTG
GCACCGATTTTGCTGTTTTGACTTGGGAGAGAGATTTTTGTGAGAGAAATGTTGAGTATT
TTTGGTGGCTATCACTAAGCACTTGAGAAACCAATTCATNNNNNNNNNNNNNCCCCTTTT
AATAGTATTGCCTTTCATAAGGGCTCAAAAGTGATTTCTCACAAATNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNATCCTATTCCTTTTCTTGCATCAAGGGGTTTCTTCTC
ACAATCTTTTGGCCAATGCATCTTTAAACTTTTCGAAATATACTTGGATAAGATCATTAG
TTTAATGATACATATGTTGTTATTAATTACCTAAACCACCTTACAAAGAAATTGTGCTTT
CACGCAAACCGTTTTTTCCAGAATTATAACACATATGAGTAACTATATCAGATGTTTCAA
AACCCCGACAACCCAGATAAATCCGACAGTTTTAGCGGTTTTCCAGTTATCTGGTCCAAA
CAGAAATGCTATATCTAGCCCATCCCATATTTTTTTCACAAGTGGCATGCATATTGCCCC
CTCCGCCGCTATATCTACGCGACATGCCATGTTTTAGGGTTCGCTTGCTCCATTTCCTCC
GCCCTCTCTGCTACAATCCTCCCCCTTCCGTCCTTTGCTCTCTTCGACGAGAGATTCCTC
GTGGTTCCATCCATTTTTCGCCGATCCATGGCCCCGGAGGGGCACACCAGCGTGGGGGCC
GACGTGGATCGCCGACACGCAAACTCATCTAGCAAGACACAAGGCCAATAGCTCCGGCCT
GCTCATCATCGAGTCGTGTCGCTCGAAGTAGGTACACAAGCATGACACACTCTCCAACAA
CAGCGACCCGGGCTGGTGGGCTCGCTTCTACGCGCCAACTACTCCCCATGGCCCACCAGT
CGGGGGCAAGGTCTCCATCACTTCCCTCCACTTTCCCAAAACTCTCCCGCCCCCGCGCGC
TCCCAGCCGCCCGCCATGGACGACGACCTCGATGCCACCGTCGGCCTCGCCTCCCTCGCC
TCGTCTGGCATCACGACCACCCCTCCAGCAAAGGCAAGCCTCACACCCCCCGTAAGACCG
CCACCGCGCCCAAGAAGAAGGAGTTGACGCCCGAGGGGTGGGCTAGGGAGTCGGCGAAGA
GAAAGGGTCGGAGGCACGCGACGGACGCAAGGGACGAAGCAGCGATCGCCGCTGTAGCGT
AGTGGGAGGATACCGTTGCACGCGTCGCGGTGGCAACAAGGGGGGCACTATTGTACCTAG
GGTTAAACCCTGGCTAGTACGTGCTCGTGGCCGCGGCCAGCACATGCTCGTTTGTGTTTC
CTCGGATGGTGTTGCGAGAGCCGCCCCGCGCGTCAACGCCTCAGCCGATTTGGGGCTTCC
ACGTCTACCTGCAAGCCTCCCGCCTCTTCGAGGAATGCTTGTCGGAGGCGAGCGTGGCGA
CGCCTTCCACGACCGTGCCTGCACCCATCGACCTCAACGCCACACTAGTGGCTGGTGGCT
CATCATCCAGTGGGCCGAGTAAACGCACCGGGGGGGTGTCAGTGACATGCTCTCCGGCGC
CCGCAACCTGTTCGACCAAATGCCCATGTCCATCGACGACGAAAGGGTCAACCGCTTCAT
GTAGAGCATCATCTTCGAGGGTGTTCCGGCTGCTAGCAAGTGCGCCAACATGAACTGCGT
GGTGTTTTTTGAAGGTGGCATCATATGTCGGCCGCTCGCATGATGCCGACATGAACTTTG
GGTGACGACATGGTCGCTGGCTTGATCTACTTTTCAAATGTGTGCGCGAACATAAAATGG
GTCGCGGACGTTGAGCGTATTACCGACCCAAATCTTAAACATGACAGGCGTCGAGCGGGT
GGCCGACCCAAACGGACAAAAAGCGGACAAAGGCGCCGTCCGTTTGGGTCGACGCGTTGA
AGTTGCTCTTATTGTGCCACATGTCATAAGAGCAACTCCAACAGAAGGATTCAAATCGTT
CGCCCGCGTCCGTATGGATCGGCATGAACAAAAATGATGACCCAACACAGAGACCCATTT
TCATTTTACATCCGCTTTGGGTCCGCACATATCCATTTCAGAGGCAAATTTGGGTCATAT
TTGAGTCGCACGCGGACACAAAACAGACGTTTTGTTTGTGTTCGGCGTGACCCACTTGTC
ACTCACTCACCCATTCACTTATTCCTATTTATTTAATTCGTTGGCCCACTCCATCCACCT
CTCTTATATTATTTTATTGATACCATGCTCTCGTCCACTTGCTTTCCGAGGAATGCACGT
ACTGACCCTTTTTAAAAAAGTGAATACGGACAAGCGGACGGTCGATCAAATGAACAAAGA
ACGACAAAATCACTGTCCATATGGATTGATGTGTTGAAGTTGCTTTAACTTTCCGTAAAA
TCATTTTTGAATGAATCGTAAAACGATTTTGCGGGACGGAGATATACCATATCTGCAAGA
GTTGTTCTAACCAAATCGGTTGGAATGGGTTGTTGTTCCAGCCTCCCGCGTTCCCCCACA
TTCCGCGTCAGGTTGTGGCCCGATTTGCTTTTGAGGGTGATCCTGTATATTGCAGGAACC
TATGCAATGATGGATCAACCAGTCCAACCGGTAGAGGATTACAGCAACGAAGCACTATTA
GGGAAACACAAGGAGCAAACGTGCAGATAAGAAACTGGAGTACACATCCCCACCTCTGGT
CAGCATTCTGGAAGTCCAGAAAACATGGATGAATGAATGGATTCACACAAGCAAGGAAGT
ACAACTAGTCTAGTGGGATGGATTAGTAGGGATGATGCGCATCTGAGTCATCGATCACCT
CCATTTTCAAATCAGATCAGAATCGAATCAAGTATAACTAATAAGCAGGGTAAATTTCAG
AAACAAATAGATTAAAATGAAGGGAAAATGGAATCAAAACCAAACAAGCAATGGACGGTT
CATTTCAAATCAGAAAGAGAGAGAGAAAGGAAGGGCAAAGGAGCAGAGAGAAGGCAAAAG
CTGCTCTTCTCTTCTTTTGCTTTTTCCCTTGGAGACGCCAACTCCCTCTTCTCCCTTTTA
TTGCCCCCATTCCTTCTCTCTCTCTCTCTGTGACGGCACTTGTGACAGAAGAGAGGGGTG
CGTCGTCTTGCTCGCGGTGGTGCCGGTGCTGGGCGGTTGCATCCACCCGTCAGCCAAGTC
AGCCATGGCGCCGGACCACGGCTCCAAGGTCGACATCTCCTTCGCCGGCCGCTTCACAGC
CAGCGCCATCGCCGCCTGCTTCGCCGAGGTACTAAACCCTAACCTAACCCCTGCTTCCAT
CGCCCCACGGGATCTCCGCCAGACGCCACTCACCGGCGTCCTGTTCCTGCGACGGCGATG
GGGATGGGATCGCACGCTCAGGGCTTTACGTTTCGCCTTTTTCTCTCGCTGGATCGTCCG
ATTTCCAATGCCCTCGCTGCTCCCCGTCCAGGATCACGCCGCTAATCTTGTTATTTCCTC
GTGGAGGGTTTAATCGAATGGGCTTCCCCTCTCGCAGATCACCACAATCCCCCTCGACAC
GGCCAAGGTCAGGCTGCAGCTGCAGAAGAAGGCCGTCGCCGGGGATCTCGCTGGGCCCAA
GTACCGCGGTCTGCTCGGCACTGCCGCCACCATCGCCAAGGAGGAAGGCGCCGCCGCGCT
CTGGAAGGGCATCGTCCCTGGCCTCCACCGCCAGTGCATCTACGGGGGTCTCCGCATTGG
TCTCTATGAACCCGTAAGAATCCCTTCCCTCCCTTTCCCCCTTCTCTATGTATATGTATG
GTACTGCATTACTTAAGTATAGGTAGTGGTACGCAACAATGAACTTTGACCCGGATTCTT
GTGCCTGACCACCTTCAGGTCAAAGCCTTCTATGTTGGTGAGAACCATGTTGGGGATGTA
CCTTTGTCCAAGAAGATAGCCGCTGGCTTCACCACTGGTACCCTCATCGTTGTATTCTCA
AATCAATTTTCCCTTCCATGTGAAATGAAATATGCTGCAACATGAGATGGTGTGCCTGAC
CTGCATCAGGTGCTCTTGCAATTGCTGTGGCCAACCCCACTGACCTTGTCAAAGTCAGGC
TTCAGTCCGAGGGGAAGCTGGCACCTGGTGTGCCGCGCCGTTATACTGGGGCAATGGATG
CTTATGCCAAGATTGTTCGCCAGGTCAGTTGCTTCTGCTCTTGTCCTGCAAGCTAACTGT
TTACTTTCCTGAATTGGAGCTTCAAATATGTCGGTATCATCTTTAGGAAGGGGTTGCTGC
TCTGTGGACTGGCATTGGTCCGAATGTTGCACGTAACGCCATCATTAACGCTGCTGAGTT
GGCCAGTTATGATCAAGTGAAGCAGGTGCGCTTCTTGTCATTATTTTCTTTATTTGTTTG
CTTATTCTCTTGCTGTCGTGAACTGTATTGTGTATCATGCAGTCCATTTTGAAACTTCCT
GGGTTCAAAGATGACGTGGTCACTCATATCTTGTCTGGTTTGGGCGCTGGCTTCTTTGCT
GTCTGTGTTGGTTCTCCAGTCGATGTGGTGAGATGTCCTCCTCGCTCAGTGCCAATTATC
CCTACTCTAGTGAGCTTGTCTAAAATATTGTTTCCTATACAAGCAACTGTGAATTAATTA
TTCTGAGCAATGCTCTCTCGGTGTATTTATCCACTAGGTAGTAAGTATTGTCTATTACCA
ATGGTTATCTTTGACAGCATCATACACTACTCCAAGTTTAAACTGAGATGTGCTAGTTCT
GACCTTTATTTCATGACGTATTCATGTTCTTTCAGCAAAGCTGTTTTCTTAATTCAGTCT
CTGTGAGGTTTATACTTTGGCCATTCTGCAGATTTATCCTCGCATCCATTGCCACCATAT
GCTAATTTGCTTGCATCGAAGCTGTTCTATTTTCCTATAGAACTTGGATGCTGGTCTTTC
TTTGAAAATAAATGCATCTTCCATTTTTGGATCATTATCAAAGAAGTCTTTCTGTATTAT
TGAGTATTGATTAGCAGTTGAGTTCTTACCTTAAAGATATGCAATCATAGATGTTTCTCT
TTACTAACAAGACACACCTTATTGCAGGTTAAGTCAAGAATGATGGGTGACTCTGCCTAC
AAGAACACTATTGATTGTTTTGTGAAGACCCTAAAGAATGATGTATGCTCCACTCTGTTA
CTCTGTTCATGCCTTATCTACACTTTTCAGTCAGCATTGGATGAGTGATACTTGTCTATA
ACATGTTTTTCAAACACATTTAGCATCTGGGGCTGGGCCATGTTTGTGAAGAAAAGTCTT
CCCATTTCATATTTTATTAATATGTGCTGACAGTAGGTGATTTATTGGCAACTTATACAG
CCTCTCTTAGAATTAACTGTCCTGATTGTTGTCATCTTGAACTAGTGACAGCCTTCTGGT
GGCTCTCAAATTTGAACATTCTCGTGGCGGTTTAGCAGCACTTTATTTCCTAGTGATCAT
GCGAATGATAGATATATGATGGCAAATAAGAAGTGGACTCTGTTGTTTATGTGCCATCAT
GTACTCCTGTTCATGACAGCTCATTGTAGGAATCATATTATTTTTATCTCCGAACAACTA
ACTCTTAACCTTGATGTAAAATAGGATGATAGTGTTTTCCCTCTGTACTGAGTACCTTCC
ATAGTTTGCTCAGATATCTTTTGAGCCATGTTTTGTTAATAGTATAATCGTTTGTGACAG
CTCATTGTAATGCTATCTTTTGAGCCATGTTTTGTTAATGCTATCTTTCCACCAAATATG
TTGATACTCATTTGCTTAGATCATGTACTCCTGTTCATGACAGCTCATTGTAGGAATCAT
ATTGTTTTTCACTTGGAATAACTAACTCTTAACCTTGATTTAAAATATGTTGATAGTGTC
CTCCTTCTGTACCGAGTAAGCTTTCATGATCGCTTAGATATCCTTTGAGCTGTGTTTTGT
TCATGATATACTCGTTTGTCCATGAGCTGAATATTCTGGATATGTTCTAGGCTCCTAGGA
ACTGCTCTGTATACCTGTTGAATGCAAATGAAAGTCCAAGCAGGTTGCTGATTAATAGGA
TTTTTGTGTGCAGGGACCTCTGGCATTTTACAAAGGCTTCCTTCCAAACTTTGCTAGACT
GGGATCATGGAACGTGATTATGTTCTTGACACTGGAGCAGGTAAGCTGAATTTATAACTA
TTCATAGTGTGGTTTTTGTTGTTGTTGCGAAATCACAGTGTGGAACTATGTTATGTAAGC
ATGCTAAATTGACTACACGAACTTGTTTCTGTGTGCCTGTGCAGGTTCAGAAGGCCTTTG
TGAGAAAGCCTGCAAATTAGCGATGAGATGATATGGTTTTGTAGAGGGTGGTATACAACA
ACAATGTGCACATTTGTTTTCTCCTACATAAGGCGTTAACCCTTGGGAGTTGAGGTACAA
AGGACAAATTTGAGACCTCAACCGTGAGAAACTGTAATAAATTTTTGTCGCTCTTGACAG
GACCTTAAACAAATGCTGAGGTAGTTCGGAGATCTCAAAGTGTTGCTAAATTTGTGTTGG
ATGGATGAACATTGGCTGCAGCAGATCTTTTGTGTGATGATGAGCCAGGAAGGCTACAAT
GCCTTTGCTTGGTCTTCTAATTGTTGATGGTGTTCTGTGTTGTCTTCATCTTTGTTGCAA
CAAGCATTGTTGTTGTCTTCATCTTTGTTGCAATTGAAATGCTGGCCCGATTGACAAGAC
CAGCAGGTATAGGAATCACTGGTGATCACCAGAGCTTATAGTTACTTATTCGTTATAGAT
ATTTACACTTGTGTGTTACGCCAGGCTGTTTGGGGTTAATCGATGGGGACGTGATGTGTT
AGGCCAGGCTGTTTGGGGTTAATTGATGGGGACGTGATGTGTTTGGCCAGACTGTTTGGG
GTTAATTGATGGGGAGGTGAAGTGATGCTTAGCTGGTTGGGTCTGCCGATCAAATGGCTG
ACAATGGTTGGTGCGCACGCTGGTTACATTTCCCGCACTTAAAAGCAGCACAAGACAGTG
AGTTTGCGATGGATTCAGTACACGACATATTTCTGTAGCAGTTCATATCCCCGTTGCCTT
TGAGAACACATACCTTTTATTCTACCGCAAAAAAAATAAAAATACCTTTTATTCCTTTTT
AGTGTATTTCATTTTATTCTTGACAAGAAAGATAATACTCCCTCCGTTCCTAAATATAAG
TCTTTTAAGCATTTTCACTAAGAGTCTACATATGGAGTAAAATGATTGAATCTATACTCT
AAAGTGTCTATATACATCTGTATGTAGTCTACTAGTAAGATCTCTACAAAGACTTATATT
TAGGAACGGAGGGGTACATGAGAGGCCATTTTGTAAAGAAGAAGATGCATCATAGACTAG
TGGAGTAGGCAGAGGCAGAATCACAAGTTGCTTTTAATAACAGTAGTAGTGGCTGCTGGC
TTGAGTAGTGCTTTCTTCAGGTTCCCGAAAATGGAGTGCCTGCCCTCGGCGACGACATTG
CCGGTGCTGGCGTTGGCGAGGAGTACGTGCGTGCCGGAGTACGCGCCCTTGTGCCCCAGC
ACCCTCGCCGTTATGCTTAGGCGGTCCCCTGCGCGGGCCTGGGAGAGATCGGGGAAGGCG
ACGGACATGTCGACGGAGACCTTGAAGTTTTGGGCGTCAGAGATGGCGGCGGCATAGCCG
ATCTCGTCCACCAGGGCCACCACGACACCGGCGGCGAGGCAGCCGGTGCTGGTGTCCTGC
GTGTGTACGTATGTGTTGTAATTGGCTTAGCTGGCGTGGATCAAGAGGAATGAATTAATT
AATACTCCTTTTATAAACTAATATAAAAACGTTCATATCACTGATTTAAATGTTTTTATA
TTAGTTTACGGAGGGAAAGGGACAAACGAAGAACGAAATCGAGTGACGTACGGTGAGGCT
TGGAGGAACGTCGTAGGAGCAGTGGATGAATCCCGGTTGGACGCGGAGGACGCGGATCCT
GCGCAGCGCGAACCCCTCGAAGAAGCTCGGCGACAGATGAGGAGAAGCCGCCGATACGTA
TGCGGATGCGGAGGAGGAGAGCGCGTCCACCCGTGCGCGGTCGTCGGCGCTCACGCGCAG
GGCGTCCCGAGCACGAGCTATTTCTGGTGAGTCGCTCATACCCAAGCTGCTCCTGCTACT
CTGACTATCCCTTTTTTATGTGGATCTGGAAATTTGATTTGTCACCCGACGACTGCCTTG
TAGGTGCCACTGCCAGTCTGCCACACCGATTACTCCGAGACCAGTAGGGTACATGGCCCC
CTTGGTTTTTATTTACTTAAAAAAATTTCTAACCAGACGATCCATTTTATCCATAGCCGT
CCGTCTAAGGCTGTACGGATAAAAGTGATGATCCAACACGTTGACCTATTTCTAAAACGC
GTTGGTACAAATTTGAGACTGAAATGCGTCGGCGCGGACGTGAATCCTTTCGGTGTCCGC
CCCAACCACCGCGGTCAACATTATTTATGACGGTCGCCCTCCTCGAGCCCAACGCGTCAG
AGGCCGCGGTCGACCTTTTTTAATCCAAACATGTGGTGAGTTCCGCCTCATCTGCTTTCA
GAACCCACCCGTTCTTATCTCGCCACCTCGTCGGCATCTCGCCACCTCGTCGGCGACCAA
ACCCTAGCACCATGGCCGGCTCCTTCCAAAACAAGGGCAAGGCCCCCGTCTACCCCCGCG
CGATACCCTCGTCGGCCTCGCCAGCATGTCAGCGTCCCGGTGCACCAAGCGCGGTGGCAC
TCGGAGCACCGCGTCCCGCAGCCGTACCCCGATGTCACCCTTCCGTATCACCGGCATCTG
GATCCCGGTGTCGGCCGTGATGCGGTCGGCGAGGTTGCACGCGGAGGAGGTGAGTCGCCG
TCGGCGTGTGTTGATGCCGGAGCAGCGGCTCAACCCTGCCTACGCGGCCGACTCTACCCA
GTAGGAGCTCTGGTTCGTGGTCGAGCACGTGGAGCAGCGCCGGCATGGCGTGCACGACGT
GCAGCTAGGAGGCCCTTCGCCGCCCCCGCTCGTCGTCAGCGAGAAGGACGAGGAGGCTGA
GGTCGCCTACCACACAGAGCTGGCAGCCGTTCTCCGCGAGAGTGACGAGGAAGAGCGGTG
CAAGGCCGACGAGGAGGAGGCGGCATACCAGCAGTGGCTCGCGGAGGCCATCACGCTGTT
GGCCGCCGGCGACTGCGTCGTGCCACCTCCGCCGAAGACCGAGCCCACGGAGCCGCGAGA
GG
