Contig Data
morexGenes
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Map Locations of contig_47824 (9253 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map locationNo map locationNo map location




Predicted Genes from contig_47824

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_63669 2 2871 bp MLOC_63669.2 Available Available LOC_Os08g35090.1, FRAME:-2, EVALUE:0.0, 13108.m03677 protein OsSub56 - Putative Subtilisin homologue, expressed





CDS Structure of MLOC_63669






Contig Sequence (9253 bp)

>contig_47824 9253 assembly3_WGSMorex_rbca.fasta
ATTCTCGCCCTCCACAAGATCAAACTTCGCGATAGCTGAGGGTCCATGCAACTTCCTAGC
AGCGCGCGCGCGCACACGCCCACCCACCCACACACACACACAACCACCACCAATCGGGTT
GGAGCCTTACAAGTGTGAGGAATTTTCAAACCAACATGTGGTTGGATGGTTAGAGGGTCT
GTGGTATCTCTAGCCCACCAGGGTTCAAGTCCTCGTGCTTGCATATATTCCTAGATTTAT
TTTAGGATTTGATATGTCGGCTCATTCTCTTGAAGGTGATCATACGGATAGGATGTGTGT
GTGCGTTCATATGGATGATTTTTTGTCAAAAATAGCACATATTCAGTGCAATTGACAGAA
AAGACCACCTCTAAAACAAATTGATAGAAAGGACCGATTGCTTCGTGGCGGCAGGCGTGC
AAACCGACATGTGGCGCCTGTCGCCACGCGCGGAGGCAGCAGGCCATGCCGCTACAGGCC
CCGACGACGGGTGCCGTGAAACAGAAATCGGCACTCAGCCGCGAGCAGCGACGGAACGGA
GTGGGTCGTGGAGGCCGTCTCTCAGCCCACGTGGAGGCTGCCGCCACTCCATCAAATGGC
ATGACTGTTTTTTCATACGTTTGAGTTCTACGAGGCAGGTGTCGTGCTTGGAGCGATACG
AGACGGCCGACTGGAGTGTACAATGGCCAGACGCGCATGACACTGCGGACACGCACATGC
ATAGTGGGTGCTGGGCTATTCAGAGACGACGTGAACATGGCATGCAAGTGAGATTTATTG
CTTAAAAAGGACGTGGAGAGCATGACATGACAAGAAGATGAAAATGTGTAGAGGTCCAGC
GGGGTCAAAATATTATAAGGAAAATAATGCATGCTGTCTTGAGGAGTGGCGGCAGCGTGC
ACGTGAGTTGAGAGCCGGCCTCCACGACCCACTCCGTTCCGTCGTTGCTCGTGGTTGAGT
GCCGATTTCTGTTTCGCGACACCCATCGCCTCGGCCTGTGGAGGAAAGATCTGCCTGTCC
ACGAAGCAACCGGTCTTTTAGGTCAATTTGTCTTAGAGGTGGTCTTTTATGTCAATTGCA
TTGAATATGTGGTTTTTTAGACAAAAAATCCATAGGAATGAGGTTATGCACGTGTATACG
ATCGTTTGCGTCTGTATTGTGTTAAAGAAAGGGAGTGCCTAGAACTCAGCTAGCTGAGAT
TTTCTATGGTCTCATTCACATAATATTATTGTATTTTGTATTTATCTTTTTTGTTTCCTT
TAGCCCATCATTTTATTCTTTTGGGATCACATGTCATATTTTTGGTTATTGTTTCTATGC
GCCCCATCTAACCGGTCCAATAACTACTCATTTGATTCTTATTGTTGCACGTTGCATCTT
TTAAAAAAGAAATTGCCGATAGAGAAAAAAAAAGAATAAGCAAAAAAGTTACGTAATGGC
TTGTTAGCTTCAACTACTTTGACCACTAAACATATTTTACAAAGAAGTAGTGTGTCCTTA
TTATATGAATTATGATGTAATAATTTGTTTTTTCTTAGTAAAAACAACTTGATTCTAGCT
TTTTCATGTAGTTGCTGCACAAATAAGATTTGCAGTTGCGACCCGCCTGCGAAAACTTGT
AGTTGCGACCCGACTATAAATATTTGCAATTGCGCTCCGACTATGAATACTTGCAATTGC
GACTTGACTTTGAATATTTGCAGTTGCGACCCGACTACGAATGCTTGCAATTGCGACTCG
ACTTTGAATATTTACAGTTGCGATTAGACTTTGAATAATTGCAATTGTGACCCGACTTTG
AATACTTGCAGTTGCGGCCCGACTTCGAATACATACAGTTGTCACCCGACTTTAAATACT
TACAGTTGCGACCCGACTTTAAATATTTGCAGTTGCGGTCATATTTAAAATCTTACATTT
GCGACCCGACTTTAAATATTAATGTCATTAATATAAAAAACAAAAATAAGACACCAAAAA
CCGACGAATTATGCCAAACAAAAAGGAAAAGCGATAAAAAAACCAAAAAAAAAAGTAAAA
GTGTAAGTAAAAAAATGCTGAAAAATAGGAAACAGAAAACATAAAAATAAAGAAATAAGG
AATAAAGGAAAACGCTGAGAGAAAAAAACAAAGCAGAAAACGCCAACATGGCCCGATGCA
CATATAGTGATTAACAAACAAGGCAGTGTCGCGATTCTAAATGAAAAGCAAGGCAGTGTC
GCTACGCCAAGAAAACAAGACAGCATGGCTACCTATCTATTTTTCAATCACGACGGGAGG
ACGTGACGGGCCGTGATGGGCTAGACGGTAACAAACAACGGAGAAAAGAAAGAGATCGAG
CTAGACGGTAACAAACAACGGAGAAAAGAAAGAGATCGAGCACAAGTTGGCTGGGACATG
CACGAATCACAAAGTGTTTTTGATCCAACAATTGTGAACGTGACTGAGACCATAACTGAA
ACTCAGCTAACTGAGTTCCAGCAACACCGTAATAAAAGTGTGAGGAATTTAATCGACCGG
TGCAAAACAAAATGTTATGGAAATCAGAAAGGTTGGCACTAGAGCAAAGTAAGTGATACA
TATGAAGAAAAAAAATCGCGTGCATGCGAATTCCGGACGAAAGTAACGCGGGAACATCGG
CCTCGGACGAACGGCAGCCACCCCCGGCGGGGTACCAGAGCAAGTAGCTTGACGCGCATG
CGCGCCCCCTGGAAATAGCACACGGCGAGCGCAAGGCACGGCGCATGCATGCCCGCCAGC
CCGCCCGCCCGCGCACACAGACGGCGCGCCCCGCCCCGCCCCGCGCAGGTCCGTTATCGC
CAGGGACGAACGACGTACGTGCGACGGCGTCAACCCAGCCATGACCGTCGCCGCCTCCCC
TCGCCGCGGCCGCGGCAGCGTCGTCGCTCTCCTCCTCCTCCCCGTCCTCCTCCTGGCGTG
CCGGGCGGCGGGCTTCAACACCGATTTCGAGGAAGACAAATCGCCCAAGCTCCCCCGCTG
CGACAACCCCTTCCAGAAGGTGCCCGCCGGTCGACCGATTGGATTCGATGAATCATCCAT
CGCGGAGAGCTCAAAAATTGCATTTGCGCGCAGGTGAAACTGGTGTACTGGGTCGACGGC
GAGCAGATGAGCGCCCTGATCGGTATGACGGCGAGGTTCGGCGGGATGGTGCCGGACACC
GAGGCCGCCGCCGAGAGGCTCCCCGCCGTGGTTCCCAGCTCCAAGACCGGCTGCCACAAG
TCCCCCCAGGCAATTAAACCACTCTCCATGCATGCCGGCACACACACATGAGACACGACG
CGCCCACCTGTTCTGAGCTGCATTTCCTTCACTGCAGATAGCTGGCAACATCGCCGTGAC
GGAGCGCGGCGAGTGCACGTACCTGGAGAAGGCGAACGCGGCCGCGTCCAGCGGCGCCAA
GGCGCTGATCATGGCCAACGACATCGACGGTCAGTCATCTGCGTCATTTCCATCACCCAT
TACAATTGCACGCACGCACGCATGCCGCAAACACAGGGCATATGACCGGTGCGTGCGAGC
GGAACTGACCAACAGAGCCCCCCTTTGGGCTGGCTGCTGGCAGATATGGGGAAGATGGTG
TGCTCCAAGAACGACACAGCGCTCGACTTCAAAATCCCGGTCGTGATCGTGTCGCGGTCT
TCTGGGCTCAAGATCTTCGAGGCCATGGACGGCGCCAAGAAGGGTGAGGACACCTGAATC
ATAAGTCAGTTGGTCGCCTCGTATGTCGTATACATGTGATTTGCGGCGACCGATTATGTG
CGGGCTCAGCTTCGTTGATTTGCAGTGGAGATGCAGCTGTACTCGCCGAACAAGGCGCCT
TTCGACGGCGCCATCCCTTTCCTCTGGCTCATGGCCGTCAGCACCACCGCCTGCGCCGCC
GTCTGGACCGCCGTGGTCGTCGGCGAGGAGGTAACGAAAGAAGAAAAAGATTGTTCCAAC
CGATTTCATGCATGGCGGTATCATATCATATGGATGACGGATGTCCTGCGTGTTTGTGCA
GGTGAAGAAGCCTCCTCCGGAGGGCGAAGGAGACCAGGAGGCCGCCGCCGCCGCCGTCGA
GGATCCTGAGATCGTAGAGCTGCAGCCGGAGACGGCGTTCGTGTTCATCATCGTGTCGTC
TTGCGTCCTGCTCTTCCTCTTCTTCTTCAACTCCATCTGGTCCGCGTGGCTGATGGTCGG
GCTCTTCTGCCTCGGCGGTCTCCAGGTGATCACATGATTGATACATTGCGGTTTGTTTCA
TCTCTTTTCTGACGGCCTGCCCCTGCATATTTCACATTCAGGGCTTGCACTACCTTGCGT
CGACACTCATTGTCAGGTATATATATAGATGACCCACCGACACTTAATACAATCTCACAC
TCGTCTGAATTCTTGGATTGTCCTCTGTCATCTTAATTTGATGTGGATGGACAGAGTATG
CAAGAAGTGCGGCGACACGAAAATAAAGCTCCCGGCGGTCGGGAACGTGACGGCGGTGAC
GCTCGTCGTGCTGCCGATAGCCCTGTTCATCGTCGTCATGTGGGCGACGCATCAGAGCTC
GCCGTTCGCCTGGGTTGGCCAGAACCTCATGGTACGTCGTTAAAAAAGAAGTTGTTAAAT
TCCGTCGTGTGTTTTCATTTAATTTCCATGTGTTTTACTCGACGCTTGATTGATTCTTCT
TCTTCTTTTTCCAGGGCATCGGTATGATGATCCTCGTGTTGCAAATAGTGCAAATGCCAA
ACATAAAGGTAAGACCACCATCACCCTCACCATGGACATCCATTCATTCTAGCTACGCAC
TGTGGCTTGTCAACTCCATTGATCTTGCACATACGCCTCTGATGTGCTGGAGGCCATGTA
TCCTTTTAGGTGGCGTCGGCGCTCCTGATCAGCGCGTTCCTCTACGACATTTTCTGGGTG
TTCATCTCGCCCTTCATATTCAAGAAGAGCGTCATGATCACGGTAAATCTCGTCTCACAC
AAGAGCAAGCTGGACAAAATTCCCTGTACAACCAGTGCATTGATCCGATGACGATCGATC
ACAACGCGATCCTCGTGCGAATGTGATGCAGGTTGCCAAGGGCACGGAGGACGGGCCGAG
CCTGCCCATGGTCCTGAAGATGCCCAAGGAGTTCGACGTGTGGAACGGCTACGACATGAT
CGGCTTCGGGGACATCCTCTTCCCTGGACTCCTCGTCGCCTTCAGCTTCAGGTTAAAAAA
AATTCAGAGCCAGATGTTGCTCCGGAACCAAACGTTGCTGAAATTCACCATCTGCTGCTG
GGTTGCATGATGCAGATATGACAGATCACACGGCAAGGGTGTGGCCAACGGTTATTTCCC
CTACGTCATGATCGGCTACGCATTTGGTATGCCCCATTTTTTCTGAACTTCGTGAGACCA
ACATTGAGAAGCTGTTGCTAACTGATACCAAGTGTTAACTAGCCCAAAAATTGACAATGC
AGGCCTGTCATTCACGTATGTCGGCCTGTACCTGATGAAGAGCGGCCAGCCGGCCCTGCT
CTACCTCGTCCCTTGTACGCTAGGTACCAGCCATCCCAGCCAACCCCGGCCATGGCGCCA
ACTTGCAGAATCTCGAGGTCTTGGCATGTGCTACGGGTTAACCTTCTGGTCTGAAACTGA
TCTTGCAGGAACCATCGCTGCGCTGGGCGCGCAGAGAGGGGAGCTCAGCCAGCTCTGGAA
CGCCAAGTCATAGGAGAGCATCGCCGTGGATGGAATGGATTATGGAATGCACTGCTCCTA
GTTGACACCCAGCCCTTGGCTCCGGGCGTACGGCCGGTCGCCTCGAGAGCTACAAATCCT
CTCAAGTCAATCCGACAAGGAAAGACGAAACACCTGTACTGTAATTCCGTAGCGGTTGTT
AGTGTGTCCATATGTTGATTGTAGGGTGCAGGTTAACTGACCGTGTATTTATACGATGAT
ACGCTATATAATAGGAGCTGTTAGCACTGTTGTACGTATATAAGACGAGACTCGCAACTC
TGTCCAATCTTCCCTAAGAAAAGCTCTTGATCCAAATCATAGCCACTAGTAGTAAGTACG
TACGTAGGTAGTCTACATGCCGGAGATCGTGTTAACTTGGCTCGGTCGATTGATCTTTAG
AATCGATCGATCTTTAGAATGAGCCGGCCTGCCTACTGCACTGGCGCTTGCAGCGTGACC
ACGATCGGGCTCACCACGGCGTGCCTGCCGTCGCTCCACGTCAGCGCCCCGCTCCTCACC
TGCGAGCTCCCGGGCTCCATCGCCGTCGCCGGCGGCATCGGCGCCGCGGCCTCCACGTGC
ACCGTGAAGCTCAGCTTCTGCCCGTCGCGCCGGAACGCCAGCCGCTCGGGCCGCACCGTG
ACCGTGCTCCCCTCGGGCGCCCTCACGGTGGCGCGGTACACCGACCTGCCGCCGCCCACG
TTGGTCACCGTGCGGATGAAGTGGGTCCTCATCTTCGCCTTCGCGCCGTCCGCCGTGAAT
GTGGCGGACAGGGACGGGTAGTTGAGGTTGCCGGCGTGGCCGGCGCGGCGCGCGCCGCGG
CAGTCGGCCTGCCGCCGCGTGATGGCCCGGATGTTCTGCTCCGTGTAGTTGAGGTTGCAG
AGGAAGTTGACGTAGTCCATGGGCGCGATGTCGTAGACGAGGCCCGGGTCCATGGCGCGC
ATCGGGTCCACGTGCCCGGCGCCGAAGTCGAACACGCCCGCCACCTTGCCCGTGGACTCG
TCGGTCATGGTGCCGTTGCTGTTGTCCCTGGTGTAGGCCGTGGTCATGAGCGCCGACTTG
ATGGCCGCGGGGCTCCACGTCGGGTGCGCCGCCTTAAGCAGCGCCGCCAGGCCGGAGATG
TGCGGGCAGGCCATGGACGTGCCGGAGAGGATGTTGAATTCCGTGCGCCGGCCGTCCGAG
GGGATGCCTGCCGGGCCGACGCCGCTGGGCCACGCGGCGAGGATGTTCAGGCCGGGGGCT
ATCAGGTCCGGCTTGAGTGTCTCTGGGGATTGGGGGTTCGGGCCACGCGCCGAGAATGCT
GCCACCACCGGCGCTGGGTGCACGCCGAGGTGAGTGCCTTCGAACAGGATGGTGCCCGTG
GCTGGCTTCTGCGGGCTGGACGACGCGATGTACTTACGGAGCTTCTCGCCGGAGGCCGCG
CCTACGGCGGTGGCTGGCAGGACGTGGCAGTCGGCTACGAGGCCCTCCCCGTCGAACGCC
CCATTGGCGAGCACCATCCCGGCAGCGCCCGCGCGGTGAACCACGTCGCCCTTGGCGGCG
CGCGAGTTCACGCCGCGGTCGCACACCACGATCTTTCCGCGCACGGCCGCCTGGTCCAGC
GACCCGTCCAGGCACGTCGACGCGGAGTAACTGGTTGCCCCCGCGTATACCAGCTCGTAC
ATTTTGCCGGATTGGAGCACCGGCCCGCCGTACACGCTCACGCCGTCGAGCACTTGGCCG
TTGCCGAGACGCACGTTGGCAGGGAAGGCGCGGTCCATGGACCCAGCGCCTACGGTGGTC
ATCCAGGGCGCCACATTGGTCACAGAGAGATCTCCTGGACCGCCATTGCCGGCCGACGCG
GACACAACGATGCCAGCCTCTGTCGCGCCGAACGCCCCAATCGCGATGGCGTCGAGGTAG
TACGGCACCACGGCACCGCCGACGCTGAGAGAAACAACGTCGACGCCGTCAGCGACGGCG
GCATCGAAGGCTGCGAGGATGTCGGAGTCGAAGCAGCCGCCCACCCAGCACACCTTGTAC
GCGGCGAGGCGCGCCTTGGGCGCCATCCCGGAGGCGACGCCGCGCGCGTAGCCGAGGGTG
GACGCCGGGAACACGTAGCGGCCCGCGGCGATGGACGCCGTGTGGGTGCCGTGTCCGTCG
TTGTCGAGCGGCGACCTGACCTCGGCGGTCTCGTTCATCCGGCCGGAGGTGGCCTCGTAG
CCCGCGGAGAAGAAGCGCGCCCCGACGAGCTTGCGGTTGCAGGAGCCTGGCGGGAACCCG
GGCCCGGACGCGCACACCCCGCGCCACCTGGGAGGCACGGGGCCGAGCCCGCGGTCGCGG
AAGCTGCGGTGCGCGGGCGAGATGCCGGTGTCGATGACGGCGATGACGAGGTCCGAGCCG
AAGTCGGAGTCCGCGAGGATGGCCGACGGCGGGGAGGAGAGCATCCCGAGGAACCGCGGC
GAGCGCGTGGTGGCGAGGCGGCGGACGCGCTCCGGCAGCACGGCCGCCACCCCGTGGGCG
CCGGCCAGCGCGGCCGCGGCAGACGGCGACATCCGCGCGGAGAAGCCGTGGAGCGCCGAC
GAGTAGGTGTGGATCAGCGGGCCGCCCTCCGGCCAGCCCCCGCCGGCCCCGGACGCCGCC
AGCACCGCCGACTCGTACCAGTGCGCGTGGGTCGGGAAAGCCGACGGCTTCGCGTCGGCG
TCCACCCGCACGATGTACGTCCTCTCCCCTCCCGTGTCCTCCCCCGCGCCAAGGCGCACC
CTGGCGGCGAGAAGGAGCGGCAGCAGCAGCAGCAGCAGACGGCGCGGCATTGCGCGATGG
CGGATCGGGGCAGGATAGGGGAACAGAGCAGGGAGTGGAGTGGAGTGGAGCGGCGAAGGG
GAAAGCGCGCAGCGGCTCCGGGTAAAGGTCAAGGAGACAGCGCGGTGGTGCCGTGGCGTA
CGATGGGAGCAGAGACGCGGTGTGGCTCTGGCCCGCTGGGCCGGACCGGACTGAAGTCAT
GTTGCAGAGAGGTGGTGGCGGTGGGTTTGGATGGATTTGGCGGGCCGACCCCGCCGTGTG
GGTGGGTCAGCACTCGCTTGGACTCTTGATATCGGTTGTTCGTTACCGCCTTTTGTTGGT
ATTTGTACGCGCCCCCACTCGGAGAAAAAGCTTGTTTGTACGTCCAGACGTGTGTTGTTT
TTGCCTGTCACGGGTTGAAAAACCTGGACGTTTGTACTCGGAGAGTAGGCACGCTTTGGT
AACTGCTGCGCTAGCAGTAGACCAGTAGCACCTTATGGCAGAGTGATTATCTTCTTTTTT
ACAAACCAAGACAACGGAGCAAACAAAGATAACCGCATACATATATATGTTCTCTGGTAA
AAAAAAACTAGGGTTAAGAAAAGAGCTAGCGTCTACTTTGTTCTCCGGGAAGTGCTGCAA
TTGCAATCTCAAAATTTGTACCCCGAACATATTGGAACAAACCAAGACAATAGAGCAAAC
AAAGATAAATGGAAATGTTCACACTTTTAAGGAAAACGTTTTCCTCATGCCGACGGATTG
CACATGAAGGATC