Contig Data
morexGenes
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Map Locations of contig_47817 (6176 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012




Predicted Genes from contig_47817

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_63657 1 2406 bp MLOC_63657.1 Available Available LOC_Os11g05400.1, FRAME:-1, EVALUE:0.0, 13111.m00519 protein Ser/Thr protein phosphatase family protein, putative, expressed





CDS Structure of MLOC_63657






Contig Sequence (6176 bp)

>contig_47817 6176 assembly3_WGSMorex_rbca.fasta
CCTCTGGGGCATATTTCCAACAGAAGAGCCATCAATTGGGATAGGGTATCCGGTGCAAAG
CTACTACAGAGGAATTACTTTGCTCCAGATTCAACTTTGCGGGCTGATACATTTTTCCAT
CATCATTTTCGCATGCAAAACACCATTGTTCTTGCGCATTGTGAAGGTAGTGGAGGCACA
TGATGACTACTTCAAGCTCACAAGGGATTGTTGCGGACAACTCTCTTTCTTTGTCAAGCA
GAAGTGCACGACTGCTATGAGGATGCTTGCACTTGGTACTACGGATGATGTCGTTGGTGA
GATGGTTAGGATGGGGGAGAGCACATGCGTGAAAACTACTGTCAAGTTTGCCCGTGCTGT
GGTGGAGGTGTTTGGAGCAGAGTATCTGAAAGAGCCAATGCACATGACACGGAGAAGTTG
TTGGCAATTGGAGAGGCCAGATGGTTTCCAGGACACGGAGAAGTTGTTGAATTATGAATT
TGGCATGCTTTCTTGGAAATGACAGGTTCTCATAACGACATCAACATGCTTCAAGGGTCT
CTTGTGTTCATGAAGCTTTGCAACAGGGAACAAAAAACTTTATGGCAGACGATGACATGT
TGTGTTATTTTACATAATATGATCGTCGAGGATGAGAGTTATAGTGTTGCCTAAACCAAC
GGTTTTGAAATACGTGGAGTACAAGTTAAAATCCCTGAAGATCAAGATGCAATGCAGCTT
ATGAATTTTCTGCAGATGCATGAGAATCTCCGAGGTCATGACATGCACACACAACTACTC
AATGATCTGGTGGACCATATGTGAACTCACATTAAAAATTAAAGAGCAGATGATTGATTG
TACACTTCAAATAAAATTGATGTAAACCCTTTTTACGTACGGTACCAACATTTATTTTAA
GTGCGACGTTTATTATCGAATGATCTACGTGCATGATTTTATATGGATTTAAAACCCCGA
ATATGAAGTATATGGATGCATGAAACGAAATATGAGGGACCGTCCGAAGAACATGCGCTG
ACGCGTTTGCGGGCGTATAGGGTGACTGGTTTGCCGAGTTTGGTAGGCTCTAAAGTGCTT
ATTGATGTGCAACGTCCTACAACTCCTCGTCGTGACGACCGGCAGTTGGCTTGGAGAGTT
TTGGACTAGCCAGGCTCTCCAGCCAGACCTCGTCGCGGACGGTGGCGCATTCGTCGTCGT
TGCGGTGCCACGTCCAAACGGCGCTCGTCTCGTTGACGATTCTCAACCGACCGTGCCCGA
AGCTCGCCTCCCGGAACACCGACATGTGCGCTGACTTGTGATCCTTGAGGAACCTTCAAG
AAAAAAGTAACAAGAATCCCTAAATCATTTCAGAATCTATAAGCAAAGAGCAAGGACATC
ATAAACGGTGAGATCGGTCGCCTACTCGAGAGCAAGCCCTTCCCTGTTGCCGCCGTCGCC
AATGGTGATGAACATCGGGCCCCGGCTGTCGGCCTCGTTGTCGTAGATCCTCGTCTATTT
TCATCGACCAGCCAAAAAATTAGCCTGTTTGGCAGTTGATCAATCAATATGGAGCAAAAA
TATGGTAGGGCTTACGAATCGCTCGTAGGCGTGGACGTGCCCGGAGAAGACGACGTCGAC
GCGGGCCTCGTAGAGGAGCGTCTCCATGGCGGCGCGCATCGCCTCGCCCTCCCCCTGGTG
CGCCTGATTGGTGTTGTACCATGGCGCGTGCAGCAGGACCAGCAGCCACGGCGTCTTCCG
CCGGTCCACGCCGGCGAGGTCCCGCTCCAGCCACGCGTACTGCTCCGACCCTTTCTCGAA
CTCCGCGTAGGATCCCAGCATCACGACGTGGGCCGCGCCGCCGGCCATGTCGAAGGAGTA
GTAGAGGTTGGAGGCGGAGCCGCTCTCGTCGTGCGGCATGCGCCACCGCGCATTGTATGC
GACGAAGGGCGCGAAGCCCACGACGGGGAGCGCCTCCACCTCGTGGTTGCCCTCCGTCAC
CATCCACGGCCGCGCGCTCGCCAGCGGCTGCACCAGGCGCCCGAACGAGTCCCACAACGG
CTGCTGCGTGTCGGCGTACGACAGGTCGCCCGGGAGCAGCAGCATGTCGTAGTCCGCACC
GCCGATGTGCGACAGCGTCGACGCGGTCCAGCCGGTCTGGCCGAGGTCGCCGATGACGAC
GAGCTCGATGGGGAGGGACGCCGGAGGGGTCCTGAGGGTGAACTCGTCGCCGGCCTTGCC
GCACCGGTAGTGGTAGGTCGTGCTGGGCGACAGCGGGCCGATCGTGACGTGGTGGATCGC
GCCGGACTTGTAGAAGAAGTATCGGTACGTCGCGTGACCGCCCGTCGTCGACACCGTGTA
GTTGCCGCGAGATTTGCCGTACTCCACCACCGACGGCGCGTTCCGGTCGTCAGTGACCCA
TGAAATCCTCATTCTGTCGCTTCCGACTGTTGAAATATGCACCTAACGGGTAACATGTGA
AAATGTAAATTGGTGAAAATACCCTCAATAGTAAACACAGTTACACAAAAGAATTATACA
AACATCCGTAAAAAAATTATGTATAAACCCTCCCTAAAACAAAGAATTGTATCAAGAAAC
AGACCTGTGGCATAAAGGCTAGTCTGAAGAAACATTCAGATTATAAGCAAAATATCTGTA
TTTTTTTTTCTTTTTAAATACGTATACGGATGTGTGTCACATTTTGATAAAAAAAGGGTA
AAGAAAGTCATCCACAGTATGTAAAATGCAAGACGCGTCGCGAGGTACTTGTGAAAATAA
ATCGTTTTTTAGTATCGATGCAATTGGTGTTTAAGCAAAACTGGTTTATGTACCTCTCTA
ACCAGCTTGCATTTCTTTTAAATGATACTAGAAGGCAACTACTTTTCGTATTGAGTACTG
TCGATGTCAGTTTCATCATCTTTATAGTAGGCACGACTGGACTGGTAGGTAGAGGAATTA
AACCCCTCTGTACAAATCCGCACATGATCATGGCAGCATCTTGTAGAGGCATCAAACAAC
CCAGCACCATTTTTCTTCTTAGAAAACTCTGAAAATGTTGCAAACAGTCCTAAGAGCAAC
CTCAACCGCGTAATCCAAACGTACGCGCGTTTGTTTATTTTTTTCGTTTCGGTTGATCGA
CGGACATTCATATTCGCTTTTGTAATTGGATCGATTCTTATGCCCAACCTGATCATGATC
CATTTTTAGGAGGCGCAAAAAACCATAATAAATATTTTAAAAATATAAAATCATTAATTA
AACATTAATGCGACCCTGGCTCGGCCTTCGTGGGATGGCGGGGCCAACGGCAGCACAACT
GCGTTGTCGGTAGCGGAGTGCGACATGGCCTCCGCCATCTGCTTCTGGCAGGTCGCCTCC
TCTCTCTCCTCCTTGAGGCGTCGCCTCCTCTCTCTCCTCCTTGAGGCGTGCTTCCTTCTC
GCTTGCATGCAAGATGGACGCCAACACGTCCTCGTACGCGGCCTCCGCCTCATGGTCTTC
TTCTCGCAAAATTAGGGGCGACGGCAGTCCCACACAAACCAGGCCTTCCATTCGAGAGAG
TCTGCAGCGTACATGGGATTACGCCGCTGCTCTAGTGGCAGCTGCTGTTGCCGGCGCCTC
ACCTCCTTCGCATGCGCCCGCGTCGACCGCGGCACCGCTGGCAGTGGGATCTTCTTCGGA
TCCAAATGTTACTCATGCGGCAGTGTGTCTTCGGGATAGGGGAGGGGGACGCGGTGCTCC
CAGTGCCTCCTCGTCTGGTGCACTGATACGCCTACACGCTGCCGAGGCGAAGGGAAAGAC
GCTGACGATGGGAGCATGCGGACAGGAAAGGCGGGGGATTTGCCCTTGTCTTTACTGGAG
AAGAAACCGGCTAGGGTTTGCCGTCCGCAACGGAGCAGCGGGTGGCTAGATGTGGATGGG
GCGACTTCTCGAAAAGGATGTGCCCCCTTCTCCCCGTACGCTTAAATTAAAAAGGACTCC
TATGAGTCATTGAAGTGTGGGCCCATGGTGGACGGTCGTCGTATGCTGGTTTTGACCGGA
CGCCGCGTGTGGACGGACGCGGACATGAGAATACGTGTGCCGCGTCCGCGCCGACACATT
TCAGTCGCAATTTTAGACCGAAAATGAATCCACGCAAACATCAAGCGGACACGTTTAATT
TTGGATCGACACATTAGACCTTTATTTTTGTCAACATTCATCCAAACGGACGCGGGCGGC
GATCTGGGTGAGTTGCTCTAAGGGGTAACTGAAATTAACCTCAGATTGAGTTGCTAAACA
TCGAGGATTATCCATTGTCATTGTTATCCATTGTGTGGGTATGTGCTAAACATGGAGGAT
TCTCTGTCTATACAAGCCATGATGCAAAGCATGGCGGGAGAAAACAGAGTTGACCGATCA
TGGACGCTTCTGCCACCAATTCTTTTAAGGACAATTGTCGTTTGGAAAATTCTTATAAAT
CAGCTGCGCACATCTCAATGTGACAAAATGAAGAACACGCAGCTAAAAAGCAACTCTGCA
AGAAATGCCAAATTCTTGCACACACACACACACACTGGAGAGTTGCTGAGAGTCAGAATC
CACCCGTACCTGCTGAGGATGAGCCGCCGGCTTGTCGTGCGCCGTCAGCACAAGCGGGCT
GGGCGGCGGCCGGACGTACTCGTCGGCGCGCGCGCAGAGAAACACCAGCGACGTGAGCCC
CTGCATGAGCACCCTCCACGATTGCGCCATAGCTCCCACCAACAAGTCCCCGCAGAAGGT
GCCGGTGACGCTGCGCCCGAGCGCCGCCTGGCTCATGCACCGCAGGCACCGCTCGTTGGC
CGCCGCGAAGAGGACCCTGGCCACGCCGAGGACGCTACCGGCCGCGACGTGGTATAGAAC
GCGGATGAGCGACGCGGCCACGCGGAATGCCGCGCACATGAACAGTATCGTGCGGTCCGC
CTCTTACGCGTGTCGCCGCGATGCCAGGAGAAGGAGGTCGGCGTCCCCTCCGTCACCATC
GCCGGCCTTGGCTTTAAGAAGCACGAGACCTGGTGGGGCGTAGCCGCACGCCATTACGTT
AATAGTAGTATTATGAGACGAAGACTTTGCTAGAGCGTATGTTGTGGCCTCGTAGGAATC
GGGAGGCGCATATCCTGACTCGTGAGGGAGATGCCACGGGCGTTTGCCGTACCTGACATG
TGCCGTGGGCGGCTGCGACGGTTGCGGCCGCCGGAGATGGGGTGAAGGCTCGTGCTCGTG
CTCCTGCTGGTGGATGGGGAGGAAGGGAGGAGATAGGTAGGCTGGGGATGGCATTGCTGC
AACTTTATCACGGTGGTTTTTTCTTTTTCTGTCCCTCTTCTTTTCTGCATTCTTTTGAGC
CTGCTTGGCAATATATATCGCTGTTTGGATAGGAGCTGAAAGCAACACGCCAGCTGCTGA
CGCATGGGAGGTTGATGACTTGATGAGGACACGAGAATATTACTAGATGCTGTTTGAGAG
GCTCATGACATGTGAGATGACACGCAATCTAGTCTAGTCACTAAATCGACTTTGATTGAA
AGAGTTTGGATAATTGCAATGAGCCAGTGATTATGATTTATTTCCATAAAAGGAAATAGC
ATCCCAAGTATTAAAATTTGTTTAAAATGTAATGATCTAGTCCTAATACTTGAAAAAATC
CACCTCGTCGTCCATGAACTTGCAAGATGTGTTGATTTGGTCCTAAGTCAACTACTGTTG
AAAATATGTCATAAAAGCAATAATAATTGATTATTATTATATTTCTTTTTTTATTATAAT
TGTTTATTATTCATGCTAGAATTGTATTGATTGCAAACTAAAATATATGTGTGGATACAT
AGACAACACATTGTCCCTAGTGAATCTCTAAAAGACTAGCTCGTTGATCAAAGATGGTCA
AAGTTTCCTCGTCATAGACATGAGATGTCGTTTGATNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNGACAAGACCCAAACTATGAACGTACTATATAATCATGTCAGTTTATTGTT
ACTGTTTTCTGCATGTCAATGTATATCTGTTTCTATGACCATGAGATCGGACACCAGAGT
AATAACTTGTGTGTATCAAACGTNNCAACGTAACTGGATGACTATAAATGTGACAGCCCG
AGACCGACGTTCCAGAAGATCCCCCCTTTTCGTCGTGTGATTAGTTTTATTCGTTG