Contig Data
morexGenes
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Map Locations of contig_47776 (5320 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location No map location




Predicted Genes from contig_47776

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_63625 2 2141 bp MLOC_63625.1 Available Available LOC_Os08g41880.1, FRAME:+1, EVALUE:0.0, 13108.m04500 protein nucleotide pyrophosphatase/phosphodiesterase, putative, expressed





CDS Structure of MLOC_63625






Contig Sequence (5320 bp)

>contig_47776 5320 assembly3_WGSMorex_rbca.fasta
AAGCTTGTTTGTTTTATTTGTGTCCTTAGTTGTGTTATGATATCTTTCCGTGAGTCCTTA
AGTTTGATCGTACGCATTTGCGTGTATGGTTAGCATACGATTAAATCAAGAACATCACAA
GTTGCCTATTCATCCTCTCTAGTCAACCATATCAATCCTTTCAACTGTGTGTATCTTAAT
TATATAGAGGCCAGATGTGATACTTAAATCTTTTAAGTAATAAATAAAGCGTCCCTTCTT
GAAAAAAATCTTACGCATGATTTAGGTCTACTGTGAATTTACCTAATGATAATGTCCGCA
GGTGTGACACAAGGCAACATTGTCCACACGTCTCCATAACCATCCATTTTGCCACATCAA
ACATATGGCATCAACGGCATGTTTTTGGTTTTTTGACTTCAAATTTTTTTATCGCTTAAA
AAAATCATCAATAAATCCTTCTCGACGAGATCTTTAAAACTAGATCACATATAGATATGT
TATCATAGTGTTTACAATAAAGTTGCCACGACATGTTGCATCTAGTTTTTTCTTCCACGT
TTAAAGCTATTATTGTATTTCAACTGCTTTTCATGGCAATTTTTATTAATTAACCATGGC
AAATTTTAGTAATTAACCATGAATCATGGCAATTTTTCATAACTCATCATGACAAATTGA
GTTTATAGATCATGAAAATTTTAGTATTTTAACCATGACACATTAGGGCAAACAATCATG
TGGTTGGATGGTTAGAAGGACTGTGTTATCCACTGTCCATCAGAGTTTAAGTTCCAGACT
TGACGTTGGTGCTTGCATTATTTTGAATTTATTCCAGGTCTTCCGGCGATGTGTTTTCAG
TGTGAGGAGACGTTCACGTCGACAACGAAGGCGTCAGTGACGACTTCGTCAATCTTAAGA
TAATGTGTCGGTTTAGTCTCTCGAAGATGCTCATAAAGATAGAACGTGTGTGCGTGCGTT
CGTAGAGATGAGTATACGCTCGTGTATGCGAACGACTTTGATTGTACATTGCTCAACAAA
AAAAAAGTAGCACACATTAGCTGTGCAGCCGGGCAGTTTTATTGCACAGAAAAACCCCGT
GACGTCTCGCTGGTTTAGGTAGCAAGCGTGGTGGGAAAGCAACTGTCATGCACGCAGCCG
AGCACGTCGCGGTAGTCCCTATGGACTGTGAAGGAATCATAGACCTTGCCGTCGCTGCTC
TTCTTGTACTCGAACAAGAGCGACGAGTGGTTGAAGGCGGTGAGCTTGGTGAACCCGTAG
TCCTTATCCCTGACCACGCTCCACTTGGGGATCGCGCTGGTGTAGCCCGAGAGGTGGCTG
CCGCCGCCGCCGGCCACGACAAAGATGGTCCCGTTCATGGTGCCCGAGTAGCTGCTCCGC
TCGCCGGTGACGCACTGGCCCTGGTAGAGCGGGCAGGTGCGCTCGTAGTTGTGGACGTGG
CCGAAGTAGGCGATGTCGACGCGGTAGCGCTGCCACAGCTTCTGCAGGCTCTCCCGTCCC
TCGGGCTCCTCGAAGGAGCCCTGGTCGGCGTACCACGAGTTGGAGGAGTAGCCCAGCACC
CGGTGCGCCGCGAAGATGAGCCACGGCTGGTGCTTCCGGTCCACAGTGGAGAGGCACTCC
TCGATGAACCTGTGCTGCGGCGTCCCCTCCCGCCAGTCGTGCTCCGAGTCCGCCACGCAG
AACCGGAACATCCCGTAGTCCACCTTGTACCTTGAGATCCGTTCCGTCGATGGCAGTCCA
CTCATTTCGTCATTCATTTGAAACACAAATAGTAGCTTACTATGAAGTGTGCAGGAAATG
ATTCGATTTCCGTAAGGATTGCGCACCAGAAATTTGCTCTGTTTTCGGCCGGGTAGTAGT
ACATGGTCTCGGCCGGCACGCCGCACTCGCCGCCGGAGTCCTTGACGTCGAAGAATCCGC
CGGTGTTGGGCCAGTCTCTCTCGTGGTTGCCGCTTCACACACACACAAGACGAAGGATAC
GTAATAAGCTCCCTGCCGTTTCTTATACATGACACTGCTCCATGCATGTCGTGATGGCAT
GATATACCCTCAACTCAAACCATACCTTGCAACCATGTAGGGCTTGTTGGCGCTGATGGG
GGCGACCTGTGCGGTGAACTGGTCCCACTGGGAGAGGTACCCGTTGGCGTAGGGCAGGTC
GCCGATGTGGAAGACGATGTCGTAGTTGTCCAAATCCTCGACAAGCCTGTCCGTTGTGTT
GAGCGACCCCGGCTGGTAGTTGGCGAACTCATTTGACCCGTCCCTCTCCGCCTGAAAAGA
CCAAACCAATGTAGCGTCCGTCCGTAAGAGTGATGATGCCCTCTTCCAGCTCACTTCCTT
TCTTCTACCGAGCGGCAACAAACACCCACGTATTTTTCATGCGGTTCGTCTACCCAAGAG
ACACGCACGTACGCTATCTTGTACCTTTCCCATGTCACCGAAGACGATGATGCGCTGCAG
CGAGTTCTGCCCGGGGGTCGGCGGCGCCCGGAAAGTGTAGGACTTGCCCCACACCACCGT
CCCGTCGGAGAGCTCGTGCCCAATCTTGTAAAAGTACCTGAATGATCGCAAACGAAATGG
TCTGGAGTAAACTCTGGCAACATCACATGGTTGTGAAGTGAACTAGTACTACGTACTCTA
CTACTGCATATTTTTTCCAATATTTGTGCTTACTGTTTGTTGGGCCACAGTTGCCTCATG
AACGCCGTGTGGATGAACCCGGGATCTCTCCACCCAACCGTGCGCGCCGGCTCGCCTGAA
AAAACCAGAAAACAAACACACACTCTCTCGTTTACGTAGATGGTACGTTGATCAGTTGAG
GCAGGGTCCGTGTACGTACGCACCGCACATGCTACCGCGGCTGAAGGTGAGCGTCCCGGC
GGGCGTGCGCGTGGGGTTGCCGCGGCGGCGGCCGCCGGAGGCGACCACGCCCCACTCGAC
GAACGGGTAGGCCTCGCCTATGTCGTAGCCGCTGGTCCAGGTCACGGTCATCTCGTCGTG
GGCCTTGCCCTGCGCCAGGCGCGGGAACACCGGCGCCTTGGGGTTCCTGAACGCCACCTG
CTTCGACACCGCCACCAGCCTCGGCTGCGAAACGTAATCACACAACGCCGTTTGACATGC
AAAACAAGCAGTTCAGATCGCGGCAGGGTAGAATCCAGATAGATAGTGGTTACGTTTTCG
AGGCCGCCGGTGAAGAGGGCGAAGGAGAAGTCGGAGCGCTGGTTGATGAGCTGGAACCGG
ATGGCGCCCTTGCCCCCGTAGAGGTAGTTGGCAGAGTAGTTGGCGTACTGATACTGCAGC
TCCACACACCAAGAGATCATTTCAGCAGGTTCAGCTCGACCATGTCGTTGTGCATCCATG
TTGACTCGTGTCACGTAATCTGAAGAGAAATTCTTGGTTAGCAGCTAACGAACTGACCTT
GATGGGCGCCGTGCAGAGCAGCGGCTCGCCGGGGTACCTCGATGGGTTAGGGCACGAGCC
CGAGCTGCATGTATATCGGAATGTCAGTCAGAGGATTCATCAGCGAGATCAGAACTGAAT
CTATTGCGCGGGACTTGCATGAAATCGGCGGGGGAGAAGACGGCGATCCAGTCATCCGCG
GAGGGGTTTTCCCAGCCGTATTCCGCGGTAACCCATACAGTGTCTTCATCCTGTCAGACG
CAGTTCAGCAGTTTGAGTTGCATAGATTTTTATACTCCCTCCGTCATAAAATAAGTGTTT
TAAGCTTAGCACAACGTTGTATTAAAGCTAGTACAAAATTAAGACTGTTATTTTGAGGCG
CAGGGAGTATTTACAATGGCGTTTTTTTTATACAAAAGGCAGCTTCATATATTCATTCGG
AGATTTGTGGCCCTGATAATATCAGGAGACACATTAAACCAGCAGGACCCTACATCATGT
TCATCTCATCGGATGAAACACTGAATGTTTGCTCAATCTAGCTACACTGTATGTTTTGTA
AATGGATGATTAATGGCGATTTTTTCTGTTAGAAAAAAAGGGGAGGCCCCCGGGTCCATT
ACAGTGACATGTGCATCCTTCAGTGACCTGATTAAACGACAATGGCTCAGTTCCACTTCT
CCAACCTCCTAACTGTTTTGATTTTATGTGCAGTTGGCTACTTTAATAATCATTGAAGCC
AGAGCAACAATGAGTAGCCAATTAAGTTGCCTTTTGATGTCAACGTGCTCTCTGATTACT
ATATGAGCACAGAATCAGGATAAAGTGGTGCTAGTGCTACCTTGGACAAGTGATCCGGTA
TGTCCGTGGTGACAGTACCATATATCCTAAACAAGCACTAATCAAATCAAATCAAATCAA
AAGCCGTACTGGTAATTCTGCAGAACGTCCTAGAGCTGTGTATCATCATCTTATGCATCA
TTTCATTATTCAGTTAAAAGTTCACAATTTTGGTTGTTAGTTCACTTTGTATAAGACGCT
CCCCTGAATATTTCGTCTGCTGTGCCCTTGGATGTAAGATCCAACGAAGTAGCACACTAT
TCTGCTATACAACTTTTGCTTTCCAAACCCCAAATCCAAATCCAGAAACTCCAAATCCAA
AAAACAGTGTTGGTCAAATTGAGCCGACGAATATTAATTAGTACGTACTACACTAGCTAG
GCAACTATCTTTGCATACCTGGTCGCCGAGCAGCGCCGGCGTGGCCCGCACGTACGCGGA
GCCATGCAGGTTAACGGTGGCCTTGTTCATGGCGATCTTGGACAGCGGCTGGATCCCCTC
GGCCGGCGACGCGCTCGCTGTCGCCGCCGCCGCGGCCATGGCCATTGCCAACGCCGCTGT
CAGGAGGACATGCCCCATCCCCATGCCTCTGCTTCAGCTGTAATCCCTGCGCACTGGCAG
CTGCTCCTAGGCTGCTACTGCGCTCCAGGCTGGGGAGTGTCCGGTGTACGCCATGGCTGG
CCGGCCTATATGTAGCCAAGAGAGACACGCATGCAATGCGACACGCATGCAATGCGTTTT
CTGGTAGTCTAGTAGAGAAGAAAAAGAAATGTAGCCAAGTGGAAGGGCAGGCGGCGGGAG
AAGGGGGTCCATGAGTGTTGCGCATTACAGTGACACTGTGACAGTATATATTTATTCATT
GCGAACTTTTTCATGATGTTTACATTCGGGGATGACAATGCTAGCTATTTTTATGGAGGA
GTTTCGAAGCCAACAGGCTTGCCCTGTTGCCAACCCTCGTGCCAACTTCACCGTCGCATG
ATCCCAAACGGACGTCCGGTTTCGTCCGGATTTTATCCGTTTGGGGTAGAAAAACGGACA
GCGGACGCTGGACAAAGGCCGAACAAAGTCCTTCCATCCA