Map Locations of contig_47762 (3509 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012




Predicted Genes from contig_47762

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_63612 9 3472 bp MLOC_63612.2 Available Available LOC_Os08g41210.2, FRAME:-2, EVALUE:1e-24, 13108.m04418 protein expressed protein





CDS Structure of MLOC_63612






Contig Sequence (3509 bp)

>contig_47762 3509 assembly3_WGSMorex_rbca.fasta
TGTTTGGTTGTGCCTGGAATTTTCTGATGGAATCAAAGGGTGTGACCCAATTCCAATTCC
TGTTTGGATGTACACAACATGGATTTTGGTGTTTTTTCGACTTTGGACAATATAAACATA
TGCACATGCATGAAAAAAAAAATAGTACGTGTATATTTGAGTGTTTATATATTATTTTGC
AGATATAATAACATATAAAATATTGCAAATAAGGTCAGTATTAACAACATAAGTACGAAT
AACTATGCAAAACACGTCCGAGAAGCATGAGACAAAATAATTTAGAAGTACCAACAACAT
GATATGGATAATAATTATGTCTCTAAAATATAGCATCGGTGGATAGTTTATGTCTCGTAC
ACATAGCAGAAGCTTATAGTTCGCAAACATAAAAGTACATAGAAGTTCATACATCAACCA
AACACGATAGCAACCATCACTCCAAGGTCAAGAGCCATGGCTTCCTTAAATCTTCGGGGA
GTGCCATGAGCGCTTCAAACATGCGCTCATCTTTAATCAACTTCCCATAAGCTCTCAGCA
GTTCCTTATCCTCCAAACCCTGTACTTTCTTAAGTGCAGCAAGGATTTCAGTTGTAGGAG
TCACCTTTGGCATCGGAGTTGGCTCGGTTGTCTTCAAAGCATCATCAAAGGACATCTGCA
TTTTTCCCATCATTGACAAGATAGCATCCCCTGTGCGTTGCCTTTTTGGAGGCAACTCAG
GAGTTCCTTCAACAGCGGGCGTGTCTTGTGGTTCTTGAGCACACTTATTTCCTGTCCTAG
CACCTTCCGATATGCAATTCTTTCCTCGTCATCATCGAAGCATCCAAGGTTCCTCGGTGC
CTGATGAGAACTAAGATAAGCAAATGCTAGACATGACACTTCAAAATACTTCTTTGCTAA
TAATATCCTCTTTCTTTTTTTCGTCTATTCTCTTCGGTAATATAAGCAACCAAATGTTGA
TTAGACATGATGGAAAAAGCTACAATGCACACATGAATTATTCAAATTAGTGATGATAGA
AAATAAACAATTAAAACAATGCGTGTATAAATAACAAAAAAATCACACAATTCTCCTGAA
ATTCTGTTGTATGGACACATAATTTAGAACGAAGTCTCGATGCTTTTATTCTGGCTCCTT
CATGTGCCAAATTTTCTATGCTTTTTAACTTCTAACTGAATGTCAGTCGGATTCTCCCAC
CGAACTTATTCTCTTTATGATATAAGGCTGGTGGAGAAGTTTCAACATGGAAACAACATA
CAAAATTAAGCTTTCATATTGGAATGTTGTATGAAGCTGCAGAAAGAAATATCATAGCAA
AAGCTTTTATATTGTCTGAGAGGATACTACAACAACCATCCATCTTGGGAGATGCATTGC
TTTCAACGGTTGTGTGCAATGAAATATCTGTAGAGATACCATTCTACACGTATAATGCAA
AATGCTACTAAATTGGGAGAGGCATTGCTTTCAACGGTTGTGTGCAATGAAATATCTGCA
GAGATACCATTCTACACGTATAATGCAAAATTCTACTAAATTGGGAGAGGCATTGCTTTC
AACGGTTGTGTGCAATAAAATATCTGGCATCTGAGATATAAGGTGGAATGAGTAGGCAGA
GCAGCCAGTTCTCAATCATATACACCCTCCATTCCTCTAGCCAAGGCGTAATTTTTGCTT
TGATAAGACCAAGGAGGTGTTGCGTCGGTTGATTAGTCATGATTTGTGATCATGTGAGGA
ATATCACTGTGGGTAGCATATGAGAAACTCTAGTCATGATTTGCACCGGCAGTGGCGACT
ACAGCGGGGTTTGACCCCTGGGTGTGCCGTCAGGGGGTTCCGTCGGACATTCTTAAACAT
GATGCTACAGAGGGTGGGGGTTGATTTAATGCATAAGCACACAATCTCAGCGCTTGATGT
GATAAAAATAATATCCAAGCGAAAATGATAAAATGTGCAACACTCAGTTTACTACATATG
GTACCTTGACCGGGGTTGTTTTGATTTGGAATCACTTGAGCATTTCCAGGAGCCTGCTGT
GTCTTCGTCTCCATAGATAACATTTTAAGAGAGATCTTCTGTAAATAATCAGGTTGGGTA
ATACAAAGGAAAACAATGTAAATTTTATACCAAATTACCAATAGTAGCTTGCAACCAACA
GTTCTGGTTGATTAGCAGTTTAGCATGCTCAAGAAGGTGCTTCAACTTTAAATATTTGAA
TCATAGTTATACATAAAAGGCCATCTAAGTAGCAAAACACACTGCCCCAAATAAGCGATA
TGAACAGAAAATACAAATCAAAATAGGCCCCAAATAAGCGATATGAATAGAAAATACAAA
TCAAAATAGTGACAAAAAAGATTAAAAATATACTTGCTCAATTCCATATTCCGCATATAA
CTTTTTGGGTTATATTCTGGAATGTAGTGTGTGTAAGGGCTCTGAGGCCACTCGGGGCGA
AAATACATCTACTGCGATCCAAATTAATTGTCACAACTGCCACAAATAATTTGGATCAGA
GGGAGTACGACATTTGGAAACGGTTATGCTCTATTTCTAACCCATAAACCTTGTATGACC
TCCATAACTAAAAATAAATAAAATGTGCTCTGCCCCGAGTTGCCACCAAGATAGGTTATA
TTACCTGGCTGGTCGCTGCAGCATACATCTTCTCTTCGAATCGCACAACGATGATTTGAA
GCTTGTTCAGCCCCTCTGGCACCAAAACTGGCAGATGCTTCTTCAGAGATTCCATTTTGC
GCGTATGATGCAAAATGTGAATAACTTTGTTGGCATGCATTGCTTTCAACGGCGTGGAGT
AAGGTGGAACGAGCGGGAAGAGCAGCCGGTTGAGGTAGATCTCCAATCCCCAATCAATCA
TATGCTCGCTCCATTCCTATGGGCAAGGCGTAATTTTCGACGTTGCTAAGACCAAGGAGG
TGCTGCGGGGATCGATTTGATCATGGCGTGTGATCGTGTGAGGAGTATATATCCACTTGG
GGAAGCATGCATGCTGCGTACGAGGAACTCTAGTTTCAGAACAAAATTGTATCCCGACAC
AGTACTAATTCTAATGTAGCATGGTTTCCCCTAGGAGATCAAAAGCTGTGACATGTGTGT
CATGCTACTGAATTGCTGTGCGCAATGAAAAAATTTGCACCTCTTGGTGAGTAAACTTGC
GCTAAATTGTTCAGACATAACTCAATGCTAGTTAAATGAAGTACTGTAATTATTAGGCTG
GACTGAAAGCAGAGCAGGTGCAGTAGGAAGTTGACCTTTTGCTGCCGCTAAGGAGGATAT
ATGGCTAGATCGAAGCTCTATCGGATGGATCGACGAGGAAATCGACCCGCAAACACGCGG
GAAATTCCCTGGGGAGACCGAAAGCAGACGCGGAAGAAGGATCGAATGAATATGGATTAG
ATGAAGGGGAAAGCAGAGTAGATCGGCGAGAGTCCCTACATACATCTTGTTGACGACCCT
GCTGCGCGCCTCGGGCTGGAGCTCGGCGC