Contig Data
morexGenes
Links



Map Locations of contig_47760 (4654 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_47760

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_63610 1 277 bp None Available Available None
MLOC_63611 3 1303 bp AK251386.1 Available Available None





CDS Structure of MLOC_63610






CDS Structure of MLOC_63611






Contig Sequence (4654 bp)

>contig_47760 4654 assembly3_WGSMorex_rbca.fasta
TATGTAGTCTCCTAGTGTAATCTCTAAAAGGTCTAATATTTTGAAACGGAGGGAGTACAA
TTTATATTGTTAGGTTTACAGATAATCAAAGTTGGGGGCAATAAACTGGATGGAGGGAGT
AGCACCCAGCATTTCTGAAACAGATAGGAAGTAATGACACAATGGACAGACAATACAAAT
AGTAGACATAAAAGAATAACCAAGATACAGGCATTTGTATATACCTTACACAACAACAGT
TGGATTTGCAATCAAAATCGAATATTTTTTTAATAGCCCCTAAACAGTATAATTTCAGGT
CAAGGTTTGACCACAGATTTAACTAGCAAAATAAAGTTTACATGTAACAAAAAAAAAATC
ATTGGAAACTTCTTTCAAATACGAATCCATCACTATAATTTTTATGGCATATAATTTATA
TTTTGTTAATCAAATCTAAGGTCAAAGTTTAGCACAAAATACGAAGGGGGCTAATAAACA
CGGACGGAGGTAGTATGTCACAAGTGAACAGAAAGGAACTGAATATCAATACAGTAACAC
ATATCATTAATTATTAAACAGTGTTGTTCCATAACCACCCACCATCTAAATATGTGTTGG
GTTCTGATTCCCAAGGCATAACATAAAATACCGCAAGCATAAAACAAGAGGCATACAACA
AAATACACAAGTTTCTGTGAACATGAAACGGGAATCTTATGGCAAAAGAATGTAGGAAAT
GGAGTTACCGAGAGGCTCTTCATAAGAAGACATTCCACTTCGCTGGTTGAAAGCTTAGTC
TGCTTGGCAATAACACTTAATGGGATAGTTCTATCTTCTGATGGCCGGCTATAGATTGCA
GCGTAACAAAAGATATTAGGGAAAAACACGACAGGAAATGGAGGTGATATTGGAAAGTAA
TAGCCCACAAATGGTACCTGAAGATTATCTCCATCAGACACAGAATATTGATCTTCTCAA
GCAGTTTCTGTTCATTCTGCACCAATGCAGGCTGTGCACTAAGAGCAGCATTGTGAACCC
CACAAAGCTCTTGGTAGAGAGCTAGGTTGCCGGTGTTGAACGCTTGTAACATGTGATAAA
CCCACTCCACCTTGGTCCCAATAAGACTAATGATCTATAAGGGTATAAACCAGAGTAATT
TCACTATTTCAGGCATGAGAAGTTTCGAATATGTTTAAGTCAAATCCAGAAGCAATGATG
TTCATGTGCTACTAGTCAGCTTGTCTTAAATAGATAATATGTAGTAGTATGCCCAAATTA
CTGGTCCAACTAAAAGGTGGTTGCTATATTTATGTTAACCAAAAGAACCCTCTGTGCTGA
CAACCATGGTCAATGAGTAAATATAGTGCATGCCTTTGTATACAAACACTTAACTATTCT
GTCAAACTTTTGCATGGCTCACATTTGATGACTCGCCTATAACTGCATACACCAACTAAC
ATAGTTGCAGATGATAATTCAACAATTCATACTGCTATATTTGTGTTTGATACTATGAAA
GGCATCCTGTTACGGTGGGTACCTCAAAATCCGTCCCTTTGGTACTTGCAGTGTAGAATT
CAAAAGAAATTGTCATTTAGCAATCAGGACGATCAAGTATGTGGAAAGGTACATGTAACA
GCATCCAGAAGCAAGTGGAATAGATGACATACACACTATGCAAATAATAAACTACAAATG
CGTCAATTCAGGACTGGGAACAATAGTCGTGCACAAACAAGCAACACTTAATTCGACAAA
AAGACAAGCAATACTTACAATAGTCGTGCACAAACAAGCAACACTTAATTCGATAAAAAG
ACAAGCAATACTTACAATAGGGTGAGCTAACAATTCCCCGAAGTTGTAGATGTTGTCCCC
CAGCAAGGCTGCAAGGGACAGATCAAATGCCAAATCCTGTTTGAAGACAATCGGCATCAA
ATAAGAATAGAAATAACATCCATGGCACATTTCAGGCTAAAAGAAAGGACTGAATAAAAC
ATATTCTTGTGCTGTAGAAATTGATGAAATTGTTAACTGCAAAACTTACAAGCTTGAATG
AGTCTGAGAGAGACCCCACGGTTGTGTACGCCAGATAGAGAAGAGCGTTCTTATAGAACT
CAGCAAACTCTTGGAGCGACTTATGGTACTGAGACGATATCCAGTAGAAGCTAGCATGGA
CCGTTGGATCCACATCAGTCATGCCATCCAGGGTGGTCTTCCCTTCCTCCAGCAGGTTCT
TGCACTCTTTGTGGTTCCCTTTGTCGAGGTGAATTGCTGCGATCTGCATCTTGACGTGAA
GGATGGGCTCATTGATCCGCAGCTCCCTGGTCTCGCGAAGCTTGGTGATTATCCCCTCGA
GGAAGGCGATGGCGGCATCCTTGTCAGGATATTGGCGCGAGGCTATGACCGCGAACTGGG
CGAGTTTGAGCAGGTTGATTTTCGTTTCGAAATCGGAGATGAAATTGTTGTAGAGCTGTA
TGAGCGTGTCGCCAGTCTGCAGAACAAACAGCAATTGCCGTGGAGACCAAATCAGTCCCT
AAATAGCGCTCAGAATCGAATTGGAGCATGTGAGGCGCACGAGTTGCCGCATGCCAGTTA
ACGGCGCATCTGGAGCCTGCATCTACATCTAGGTTCTAGGTTCTAGAGGGGAAGGGGGGA
GGAAGTGGGGGAGATAGTGGAGGGGGGTAGGTACCTGCGCGGCCGGGATCTGGAGGAATT
GGTCGAGCTTGAGGGTGAGCTGGTGCCAGAGCTTGCGCTGGTAGAGGTCGGCGAGGTCGG
CGTACCAGTCGGCGAGGTCCGGCCGCGCCTGCCGCTGCGCCTCCACGTACTGCAGCGCCA
TGGACGACGGCGAGGGGTGGAACCTGAATCTGGAGAAGCCTTTTTCCGTTAGGGTTTGGG
GAGGGGGAGGGAGACGACCACCGCCAACTAGAACGAGAGGCAATGCGGCGAGGCGAGGAA
GATGGAAGTAAAACCCTAGTTTCGGACGATATAAACGAGAAGGGAAATTGGACTAGGCGG
CGGCAGCAGCAGGCACTAGCTCACCGTGCGACGGATACTTGCCGTGGAACGGAAGGGACC
CGGATGGAAATCAATCTACGGGTACGGGTGGAAGAAGCCGAGCCGGACGGAGGCGACGCC
AACAAGAGAAGGAGGGGCGGAGACGTGTCCTCGCATGCGGCAATGCACAAGCAGCCCGGC
CCAACGAGGGCACAAGCAGCCCGGCCCGATGTGCTCACATGGCCATTAGATATCTCCACC
CGTTCCGCTCCCACTATGGTCCGGCGATAGCGTTTTTGGCGTTTCGCCCACCCTATTCTC
GGCCTCGGGCGAGCGAGTTTCCAACCGTGTCTTCAGGTTTCGGCCCTCGGACGTCGACGT
TTTCAAATTTCTCTTTCCCGCTATCCAAAAACACGTCGCGAGTTCAACGATCGTCATGCC
ATAAGTCGGCGATTCGTGCCATAGTTCGACGATCAAACACATCAACAGTTCGGCGATCAA
AAGGAAAGGATAAAAACGGATCACACGACCGACTCGGCGGGGTGCGGCTCCTCTATCGCG
GGGCTGGCTGGGGTTGTCGTCGGCGTAGTCGGGCTCATCATCGGCGTCACGAGGATGTTC
GTCGTCGGCGTAGTCGGGCTCGCGGTCGGCGTGCGCTGTGCGTTCGAGCTGGGCACCGTT
GTGGTCGTCGTTGCGGTCGTGGTTGTGGTCGCCGTTGTGGTCGCCGTCGGCGCTGGCATC
TGGCTTAAGATGAGGTCGTCTTGTACTATGTACCACACCTTCACCTTCTCGTCCATCGTC
GACGTGTCTACCCTCATCAAGAACTTCAGATTGGTGTTCCTCTTCGGATTTCTCCTCCCT
CCTGGCAGCGCTGCTCTTGAGGTCGGCGATACATTGCTCGATCGAAGCATGCAGTCATTG
GGCAGCGGGCGCCGCGTCCCTCATCGTCCTGGCTTTTTTGGTGCCATCTGGGCGCCCTTG
TGCCGCAGCCGGGGCAGGCGCGTCTGGGTTGTAGGTCTCCTTGGCCTTGTTGAGAGCGAG
TTGAACTTCCCTTCACTTCTCGCACGAGTCGATCCTGGAGAACACGTGAAGGAACCTGAA
CTCTTGGTCCTCATCGTTGGCGCGGTACATGACGAACATTCGAAGCATCTGCATAAAACA
GTGGACGAAACATGTCGGCAAAGCACACGGCGGCGCGACGAACTAGGGTCGGCGAACTTT
GGGCATACCTGACCCTCGACGTTGGCGCAGCTTTTCGAGCGAGTTGCGACCTCCTTGACG
ATGTCGTGCCACTTGTTGCAGGTCATCTGGATCGTCGACCAGCGGTTCACCATGGCCTTC
TCGTCGTGGTCCATGTGGATGCTAGCGAAGTCGGGGTCGACCAGCTTGCGTTCGTTGAAC
GGTGTTTTGATTCTCCCCCAATATGTATCGATGTTCTGATTCGTGCGGGTGATCGGGTCG
ATGCTGACAGTCTTCCACGCTTCGGCAAGGCACTCGCCTTCCTTGGACGTCCACTTGACG
CGGGGTTCGGCCGGCTTGGCGTTCGCTACCCGCTTTCTCTTCCTCTCCTTCTTCTACGGC
ACTGGTTCTGGTTCCACCCCCACCGCCTCTTCCTCCCCCTCCTCCTCCTCGACATCGTCG
AGCTCATCGTCAATGTCGCCGGTGGTGTCCATTG