Contig Data
morexGenes
Links



Map Locations of contig_47722 (3447 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map locationNo map locationNo map location




Predicted Genes from contig_47722

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_63570 1 1345 bp MLOC_63570.1 Available Available LOC_Os02g01510.1, FRAME:-2, EVALUE:6e-154, 13102.m00071 protein lactate/malate dehydrogenase, putative, expressed





CDS Structure of MLOC_63570






Contig Sequence (3447 bp)

>contig_47722 3447 assembly3_WGSMorex_rbca.fasta
GGGGGTCGCCGCGGGGTTCCGATTGTTGGAGCCGCCGTCACCGTAGATGTGGGAGAATAG
GGGAGTCGCTCTCGAACCGTCGCCTTCGCACCTGCACCGGAATCGCACATACGCTCGTCA
TCCCTCGGTGCTTAATGGGCCGGTCGCTTGGGCCTAATCAACCGGCATACTGCGTTTCGG
CCACGGGAGTAGCCTCCCCTTAGGACAGCCAGCCCAAGAAAACACAAATATGGCACACGG
ATCAGATCGAACGGTAAAAAACGGTCTGATCATAAAAATTAACGGTCCAGACGTCTCATG
GCGTGAGAGAACATGGATTAGGCTAAGTTTTAATATCCTAATAAATGCATTGTACTAGTT
ATTTCTTAGGCTGGTCATAGTGTAAGTAACTAAGGTATTATCATGTACTTGGGACTAGCA
AATATGCTGATGTGGCAGACAATTAAGGAAGATAGAAAGAGTTAGAGTAACATAGGTAGA
TACCGTAATATGTTAAATGCTATGTATGTGTCATGCATGTCAATAAATAAGGTTATCTAT
GATGCTACTTTATAATACTATGCACTATGAAGGTAGTATCATACTTCTTATGTAGTACAA
TAATATCATATGCATAAGATAATACTATATGATACTCCACACTATGACCAGCCTTATATT
TTTATTACACATATGATTACGTGTTAAGAAACGATGCATTGACACACACTTTATAACCTA
CTATTATACTTGCTCTAAGTTCCACTTCTTTTCTGGGTTCAACACAATTGAAGGGTCTTT
AATGGCTCAACACAATTGAAGGGTCTTTAATGGCAATGCAATATTGTTGGACGGACGCAT
GCCCTTCCTTCCTTGTTAGCAGTTTCATTGCTTATTGTAACCGAATTTCTCTGATGCAAT
AAAGACCCTATGTTTTGCTAGAAGGAAAATAAGGACACCGCGTCGCTAGGAGGCTCAGAC
ACAAAGCTCGCTGGAGGCAAGGCAGGGCAGAGAAAGCGTTTAGATCACTATTATTGATTG
TAATTTTTGTTCAGAGCTTATCAAGCTGGTGATTTGGTGCGTTTAGATCACTATTACAGA
TCCTTTTTCGAATTACTCACCCCAAAATAGATATAAATAAATGTATACTAAAACTTAAAA
TACATATAGATACATTCATTTTTGCGATAAGCAATTCGGGACAATTTATGTATCTTGTTC
CTGAAAATAAAGTAAAATTTAGGCATCTTATCTTATTCTTATTTACTGTTTATTCTTTGA
AAGTTGGAGCAAAATCGACTCGACTGACACCCGGGCCATTTTCAGGCAGCTTACACGAAC
GCGTTTAATTATAGCCCGAGCGCCTGACAGTAGCCCCAGAGCGTCATCGCGGACCGACGG
AGAGTGGTCTCTTCGTCGGTGGTGAGTTCCAGCTCCGCAGCGACCCCAAGCACACCGCGG
CGCCCGAGCCTGGCCGGGAGGCTAAGGAAGACTTCATGCACGTCGCCGGGGACGAACCCT
TTGGCGAGCACAGACACCGGGTGGACGCGCCGCTGGTCGCGCAGGAGCGACCGGGCGAGG
CTGGCCACCGAGTAGCCGATTGCCCAGGACGTGTACCCCTTGAGCCCGATCACCTCGCGC
GCGCCGCCCACCACCGCCCGCCGGATCCCTTCCAGGGCTTCCGCGTCGAACGAGGAGTGG
GTCTTCTGGAGGTAACTAAGCACCGGCATGCCGCCGACGCGGACGCTCGACCACAGCGCC
AGCGCGCCGTCGCCGTGCTCGCCGACCATGTACGCCTGCACGTCCTGCGCGCCCACGCCG
AGGTGCTCGGCCAGGAGGCACCGCAGCCTGGCGGAGTCGAGGTCCGTGCCGGAGCCGATC
ACCCGGCTCGACGGGAACCCCGACAGCTTCCAGGCCGCGTACGCCAGCACGTCCACGGGG
TTCGACACCACCAACAGCAGCGACTCCGGCGACCCCTCCGCCACCGCCGGCACGACCTCC
CTCAGCAGCGCCACGTTACCCCTCAGCTGGTCCATCCGCGACGACGCCGCCGTCTCCCTG
GGCACCGTGATGATGGCCAGGTCGGAGCCCCTGGTGAGCGCGAGCACGTCGGTGCCGGCG
ACGATGCGGACGCGCGGGAGGAACGCCGCGGCGTGCTGCAGGTCCAGCATCTCGCCGCGG
ACCCTGTCGGCCTCGGCGTCCACGAGCGCGATCTCGTCGGCGATGCCCTGCGTGAGGATG
GTCTGCGCGATGGCCATTCCCACGTTGCCGGCGCCGATGACGGAGACCTTGGTGAGCCGG
TCACACCGCAGCAGCGGGGTCATCAGTTCCCCTTCCCCGTTGCGGCCGGACGACGGAACC
TGGCGGAAGAAGCCGGCGCCGGCTTCGACGTCGAAGCCGAGCTCGGACAGCGAGGACGCC
TCCTTCTTCATGAAGCTCATGGTGATGGTGTCACTCCCAATCGACCGGGTTGTTGATATC
GTGATTCGTGCTTACTCAGTTGGGTTTGGAGCTTTGGATGCAATGCATGATACGTAGGCT
CTCCTATTTATACTACCACAGCAGTTGGCACTTGGCAACAAAAAGGAGGGTTGCTGCCTA
TCTCTCTATATATCTCAAGCTAGTAATAAGTTTTCTCCGTCTGCTTTTTGTCTTTCTGGA
AAGCGATCAACCCAGGAAAGAAACCGAAGTTTATGTTGACGGAAGTAAATAAATAAATAA
AAATGTGACTTGACAATACCAGAGAAGTTCCTGCTGGTTTTGGTCCACGGTTCGTTCGTT
GGAGTATGTATAAAGGGGAGTTGAGTAGCCTGAGCTAGTCGAGGAGGACAGAGAGAGAGA
GAGTATCAGAATTAAAACTGGAGATCTGCTTATCGTGCACTGCCCTTTTCCATGCAACTA
GTTTTGGTTTTCAAGCCAACTGACATATAGTCGGCCGACTTTTGCTGACCACAGATTCTG
CAAGGAAATGGTCGAATTGATGAGTCAATACCAGGGGCCTGCTTTCTGTTTCTCTTGTTT
CGTTTGTTGGTTTGGCAGTTGAAACCTTTTAAAACAAGTAATCTATTTTAGGAAACCTTT
TGAACAAGTGGACAGGGCTTATGTCGTTCACATCATTTTTCTTTCCTGGAGTCGACCAAC
CAATCCCAACTATTCCTTTTGTTCCTAAATACTTATCGGTGAAGAAAACTACACTAGTTT
TTTCAACAACAAGTATTATAATACAGAGAGATTATTGTACTTAGTGTAATGTTCCTGCGT
TGTCACGGGCCAATAAATAAATATGTAAAAAATGTTTATTTTATTTCATGCAATGTTTAA
CTATAACACAAACACAATTATTATTTTTAGTATTCCGACAAACGTCATGCTCCCGAGCTG
CTGCTGGTACGCCGGCTCCTCTTCGTTCATGCGCCGCGCTTCTTCCTCGCTGTCGCGGAG
GACACCAGCGAGCGTCGCCTGGTAGGC