morexGenes - Barley RNA-seq Database

Contig contig_47699
Source Contig contig_47699
Contig Data
|Contig Location|
|Microarray Probes|
|Predicted Genes|
|CDS Structure|
|DNA Sequence|
morexGenes
Links
Map Locations of contig_47699 (8249 bp)

Morex x Barke POPSEQ 2013	Oregon Wolfe POPSEQ 2013	Morex Genome Release 2012
No map location
Predicted Genes from contig_47699

Gene ID	# CDS Predicted	Max CDS Length	Probes in Cluster	FPKM by Treatment	FPKM by Replicate	Top Rice Hit
MLOC_63550	3	2418 bp	MLOC_63550.2	Available	Available	LOC_Os06g35650.1, FRAME:-2, EVALUE:0.0, 13106.m03681 protein reticuline oxidase-like protein precursor, putative, expressed
CDS Structure of MLOC_63550

Contig Sequence (8249 bp)

>contig_47699 8249 assembly3_WGSMorex_rbca.fasta
CATATTAAACGTTAGTTGTATTCCGCATTTGTTCAAGCCTNNNNNNNNNNNNNNNTAAAG
CACCTATTCACCCCCCCTCTAGGCGACATCCACGTCCTTTCAACATTGTCATCCAAAAGG
TCATGGAACAAGCATAAATTATAGATACGTTTGGGACGTATCAATTACCAAGAGGCTTAT
GTGAAAATATTACCTCTATTATTCAACAATTCTGGTGGGGATCGAAACAAGGTAGGAGAA
AACCGGCATGGGTCTCATGGGATGTTATGACACAACCTAAATATATGGGGCATGGGGTTC
ACAGATATGGAGGTCTTTAATCTCGCATTACTAGCTCGGGAGGCGTGGAGGGTTCTGGTG
GATTCAGAATCTTTTAGTGCTCGAATCCTGAAGTCGGTTTACTTCCCAAGCAGCAGTTTT
CTAGAGGCAGAACTTGGCAACCATCCCTCGCAAATTTGGAGGGCAATCCTGGATGGAAGG
GAGGTTATTAAACAACGGGCTATCAAGAGGATCGAGACTGGTCAAAGCACACACATATGG
TGATCAAACTAGCTTCCCAGAACAGGGAATATGCGCCCGTTCATAGGCATGGTAAATGAC
CCCTAAACCGGGTTTCAGACCTGATTGATGCCACGATGGCGATGTGGAAGGAGGATCTGA
TCCGTTCGGCTTTCCTACCTGCTAACGCTGATACAATTCTAGCAATTCCACTGTGCACGA
GACCGATAGCTGATTTCTGGGCTTGGTCGTATGAGAGAACTGGCCTTTTCTCGGCCAGTT
CACCATACAAGATGGTGATCAATACCAGGGAGAACAGTGTGAATGGAAACGTTAATACAA
CTGGGGGTCCCGGGACTCCAGAAGGAAAATAATGGACAACTCTGTGGGACACCAAAGTCC
CTTTGAAAATCAAGGTTTTCCTGTGGAGGTTGGCTAGGAATTCAATGCCATCAATGGATG
TGCTGCACCATCGCAACATGGCGACGACACACCTTTTGTGCTCTATGTGGTCAGAATGAT
TCCTAGAGACATGCACTCATGGAATGCACCACGTCGAGGTGCATTTGGGCTCTTTCTGAA
GATACACTGGTTGAGAAAATCAGTGAGAACAATGAGCCCAATGCCAAGAACTGGATCTTT
GTGATGCATGATCAATTAACACAGAAACAATATACCTTACCGGTGGTCGCTTGGTGGGCA
ATTTGGAGGGCTAGAAGGAAGGCATTTATGAAGACATCTTTCAAAGCCCTCAGTCGGTAA
ATGAATTCATAATTTCTTACATCAATGACCTCACTTTAACAGAGAGTAGGGGACCTTCCT
CGCAGTCACAGACTATACAACAGACGGGGGGATGGAAGGGCCCTCCGGAGTCTTACCTGA
AGATCAATGTAGACGCTGATGTATCACACGACTGTAGAAAGGGAGTGGCAACCGCTATAT
GTCGTGACCATGATGGTCTTTTCCAAGGAGCTTCAGCGATGGTTTTCAAGGGTATAGGAG
ATGCACCCACACTCGAAGCTCTGGCGATCCGGAAGGCTTTTGCCCTAGCAAATGATCTAT
ACATACAATGTATACATATTGCTTCGAATTGCAAGGTGGTGGTCGACGATATCAAGGACA
AGCAGCCTACAACATACGGTGTTATTTTACATGAAATTTTAGAACACAAAGCGTCTTTTC
AGACATGCAATGTAGTGCATGAATATAGGAGCTCGAATGTCGAGGCTCACAATTTAGCGA
AACATGTTATGAGGTTAGGGGAAGGCCGACATGTATGGCTAGGTACCCCGGAAGATTTAT
CTTTTGTACCTTTGAACATTTATTAATAAAGTTTTGCGAGATTGTCTCAAAAAAAAAACA
TGAGAATGACCTCCAACTTAGTGTAAGTCGCACTAACCACACAGAAACCCACACGTTGTG
ATAATATATTTCCATTTTTTCTTTTATTCTTTCTCCAGCCTTTTTTTTCCCTTTTCATTT
TGGATTTGTTTGGACCGGGATTCTGTTTGGTTTTTCTTTCTTTTCTTTCCTCTTTGTTCC
CTTTTTCTTTACTTTGAAAAAATGCATTTCAATTTCTATGAACTTTCTATTTTGATGCCT
TTTTCTTCAAATTCGATGATTTATTTTAAAATAGGTGAACATTTTCCAAATTCGGTAACT
GTCTTTCAAAAGAGATGGACTTTTTCCCAAATCAATGATTTTGTTTATCAAAGTAGGTGA
ACTTTTTATTCAAATTCAGTGAACTCTTTTTTAAAATTGATGAACTTTTTTTAAGTTGAT
TAAGTATTTTAGAATCGATGGATTTTTTTCAAATTGATGATTTATTTTTTAAAATCTGTT
AACTTGTCTGAATTCATGATATTTTCTTGTTCTGCGATTCTTTACTTTTTTAAAAAGAAA
TGTGATAAGCGTCCGTGGGGAAATAATACACGAAATCTAGATGGCCGGTCCATCAATGCC
GTCGTGCGGGCGTTAGGGAGCTTCCCTCACACGTGAAGGGTCAAATAGAAGCTCCCCAAA
CTATATGTCATCTCGATGAGTTTACACACACCCTATGTGGCTATGTCCTTAGGGAAAAGT
TTCCAGCTGGAACACCGGCCGAAATGTTCTTGCTGAACCCAACGACGTCATATCCCACTT
AATCTTGTGATCTTTGCCTTATCTTCTTCCTCCTTCCACCAACGCGCGCCCTTCACCCGA
GATTCACATCTTTCTCGTTTCCTTTCCGCTAGATTGGAAGCCATGGCCATGGGCGACCGT
CCCTCGTGCCTGCACCAGCCCATGCGAGCTCGTCGTCGCCGGCGCCGCCGCCCAGGAGAG
CTGCAACGATGGTTTGGTGGAGCTGCATGGTCAGGACGGGCACCACGGTCATCATTATTT
TTGTTAAAATTGATGTCCAAATTTGCTACAACCAGTGTCAAAATTTGCTATAACCGGTGT
CAAAATTTGCTACATCATACATGGCGTCGCGATTTTTGCTACAATCGGTGTTTCATTTTG
CTACAACCGACGACATGACGAGCTGCATCCCCTCTCAACTGCTCCATGGCCGGCAAAGTT
GCGTCCATGGCCGAAGGCGTTTTTTTGCTACATGCTTCAACCGACATCAAAATTTGCTAC
AAACAGCTCCGCATTTTGCTACCACCGGTGTCGCATTTTGCTACATCGCACATAGCGTCG
TGATTTTTGCTACAACCGGTGTTTCATTTTGCTACAACCGACGACATGGCGAGCTGCATC
CCCTCTCTTAAATGCTCCATGGCGAGCTTCAAGGCCCGCGGAGAGCTCGTCCATGGCGGG
GGAGGAAGGGGAGACGAGGACCGGCGGCGACCGACGACGACGAGGACCGGAGACCGTCGA
GAACCACACGGGGCACAAGCGGGGCAACCCACCAAGCCCACGAGCCGCTCCGACGAGCGT
CGATGAGCTGCTCTGGCAACGGACATGGACGGGCCAACGCGGGGCAGGAGGCTTTGTTTT
TCCTCGCGCGGTGGCATGAGGTTGCAATGTTTTTGCTTCAATGCCTTCAGCCAGCTCGCG
CGCAGATCTGATGGACGTGGCTGGCTGCATCCGACGACCTGGGCCTGACCGGCCGAACCA
TTGCACCGGTCCGCCAGCGCATATTGCTTCCCATCTCTTTAATACCTGGAAAAATTCTTC
TCCCACACTCTCGTATGCTTTTTTTTACGAAAAAGGGTTCCCCCGCTTTATATTATAAAG
CCTCGATCAAAGCATACTAGCCACCCCAATATTCAACGCACCCAAGCCAATGCCACAAAG
CACACAACCATGGCCAAAGTACAACCTAAAAGTACGAAGTCTTGCTGGGGGAGCAGCACA
ATAATCCCCAAGACAGAAATAAATACAGCTAGGCTAGTCCGGGTCAGGAGGAGGACGAAG
CCGCGGGGTTGAGCTGGACGACATGCGTGCGGCAGCTCCTCTCAATGCAGTTGCAGTCAT
GTCGATGGAGAGTCGGTCATTGTGTCGACTAAGCGGTCGCCATAGCTGTAGAAAACCACA
CAATTTGAAATTGCATCAGTCGCACGGAGAGGGATAACATGCTCAATCACAAGCTTAGTA
CGAACATTCCATAAGATCCAGAGGAGGACACCGATGGTAACCCAGAGGCTCAGTCTCACA
GTGGCGCCGTGCGATCGAAGCACTTCGGCAAACATGCCAGGAAGGTTGTCGTGGCACCAA
CTGCCACCAACCGCCTTCCGCAGGCACCTCCACATGAACCTAACGGCAAGGCAAGTTAAA
AAGATGTGGTTACAGTCCTCAGGGACCGTACACAGAGGACACATCCCGTCAGATGGTCCG
TGCCTCTTCAGCACTTCGGTCCAGAAGGGACCGTGTGCTTTTTTCAATCTCTATACTAAC
AACTGAGTGCATATAAAAAAACTGAGTGCATATATGACATGATTAAAGGTGTATAATGTA
TTATCTGTTTAAATATTCATGTTCATACCATCAGATCTCAAATCTCATGCGAATATATTG
TCATAAATTTTCACGCGTGAGTAGCTATCATGAAAGGTTCTTCCATTCTAAGCCATATCC
ACTGCTACAGTTTTATGTCCTCAGATTATAGACAGGCCAGGTTTCACCTTCACTTCCTCG
AGAGAAGTGGCGGTACGCTCTGCTCGTTTCTGAAGTAGTCGCTGGCGTCCACCTTCCCCT
TGGTGACGGCGAGCCTCTGGAAGTTGGCCCCGAAGTAACTCTCACCCCACACCTTGCCGG
TTTCGTAGCTGGTGACACCGCCGACCACCGTGTTCTCCCCGATGTCCAGGTCCCGGTAGT
TCACGTACGCACCCCTCGGGTTCTTGCTAACGAACGGCTCCATGAAGTTGTACAGGCCAC
TGATCCAGTTCGGCCCGTCCGTGCCGTTGCCCGTCCAGAACGCCACGTACTGGATGTTGT
AGAGGACGCCGCTCCGGTGAGGGTACGGCGTGTCGCCGTCGGCGATGCTGCCGACCCTTC
CGCCGTGAGGCTCCAGGATCATGATCCCCGCGGCGGAGCTGTTGAACCAGGGGAAGATCT
TCTCCCACGTGTCCTTGGTGATGGCTTGCTTGACGTAGTCAGACTTGTTCTTGGTGAAGG
TGCTCAGGCTGGTCGTCCGGTTGAGGAGCGTCTCCACCGGCGTCTCGGTGTCGCCGGAGT
TGATGTAGACCGTGGACTGCAGCCAGGTCATCTCCCGGCAGTCGGCGCGCGTCATGCCGA
GCTCGGGGAACAGGCTGCTCATGGCGCGCCCCAGCGGGCTGCAGCCGCCGAGATACAGGG
TCTGGAAGAGGGCGTGCTGGTTCTGCACGATCACCCGTATGCTGAGGTCCTCGGGGAGGG
CCGGCGCGAGCGCCTGCCATTTGGTCACGGCATTGGCCGCGCCCTGGTCAATGGTCTTCT
GGATGTTGGAGAACGTCACTGTCGGCGGGACGGGTACCAGCCTGACCTTCCACGACAGCA
CGATGCCGAAGTTCCCGCCGCCGCCGCCGCGGATGGCCCAGAAGAGGTCGCTCCCCATGG
CCTCCTTGTCCAGCAGCCTCCCGTTGGCGTCGACCAGCGTGGCGTCGAGGACGTTGTCAA
TGGAGAGGCCGTACTTGCGCATCATCATGCCCATGCCGCCGCCGCTGATGTGGCCGCCCA
AGCCCATGGTCGAGCACACGCCGGCAGAGAACGCGAGCCCGGGCGCCGCCTTGGCGACGG
CGTAGTACAGCTCCCCGACCGTCGCGCCCGAGTCCACCCACGCGGTGCCCGCGGCCCGGT
CGACGCGCACGGCGCGGAGGTTGGCGAGGTCGACCACCGCGAACACCTCGGGGCGCTCGG
ACCGGTACGAGAGGCCCTCGTAGTCGTGTCCGCCGCTGCGCACGCGGAGGCGCACGTCGT
GGCGGCGGCCGCAGAGCACGGCGGCCTGGACGTGGGACGCGTTGGTGGGCGTCACGATGC
AGAGCGGCCTCACAGTCGTCGGGGTGAAGAACTTGGGGTTCCGGATGGACGACACCAGGA
CGGAAGTGAACGACGGCGAACTCGGCGTCAATACGCGCTCGCTGGGGATGCTCGACGAGA
GGCACTGGAGGAAGTCGCCGGAGGCAGCCAAGGAGGGGACGGACACGTAGCAACCGAGGA
AGCAAGCTGTGAGCAAGAGTGCCATGCGTGTGGAAACCGCCATTTTTGCCGCTCTCGAAC
AAACTGGCACAGAGCTTATGGTCCAATCTTGAGCTCGATATATTTATACTAGCATACATA
ATTGTCCGGGCGTTTCAACGGATATAAATATTTTATTATATGTTATTAACACATAATTAC
TTTCCATATCAGTTTGATTGTCTAAATATTCTTCAAATCACACATATCTAAATAAATTTT
AGGATTTTATTTGATAATTACTTATTATCTTGCCAAAAAAACATAATTCCAGTTAACATT
TTTTTTAGCGACATAATAAAGATGGGAAGGAAGGAGGAATGTTGAACGAAGGGCGGCCAG
GCCCAAGACAAAACCTTACATTTTTTCTATCATGGCCATGCAGCCGTGCTGCGTGAACAG
GAAGTAGTACGACTTCGTAAACGTGCGCGTTCGGTGCTGTGGTGGAGAAGTCATGGTCAA
CCCTTTCTGGGTGGCCGTCATGGTCGATCGACGGGGTGCTGGCATGGAGTTTTGCTGGCC
TTGGTGAGACGTGTTTGATTAGTCCGTTGTCCAGGCACCGCATCTTTTTTGTGTTCTCCA
GATAGGCATCTAGAGGTCATCCTGCCTCGGAAGTAAACGAAGAAATATTGCGCTGACTAG
TTTTGCTGCGAGATTGCAAGTTGTGTTTCATTTGCACACTTCAAGTTGTGTTATCTTGAT
TTTTTTAGTCTTTGCCTTCGTGTTTTAACACAGTACAGACGCAAGCATATATACACGCGC
ATATACTTATTTTTATGAACGCATACGCGTACATCCTATCCCTATAAGCACATTTGAAAG
ACTGAACCGACATATCATCTTAAAATTTACGAAGTCACCGTAGGCACATCGTCGTCGACG
GAAACGTCGCCCTCCACTGAATGTGTATCGCCGATAATCTAAAAATAAATTTAGAAATAA
AACGAGCATCAGAATTTGAACTCTGGTCAACTGGGATACCACAATCCCTCTAACCATCCA
ACCACATGTCAAAAAAACCACAATTTAATCTACGCCTTCGTGTTTTTCTTTTCTTTTGAA
ACATAAAGGGCGTCCAGTTTCAACCTCAGATCAAGCCAGCCTGCAGCGCGCTTTTGTGCC
TTGATCTTAGAAAATTCAAGCCGGCCAGCAGTGCCATCTTGTTGCCTTCGGCCAGCCATA
CGTCTTGTTACAAAAAAACCAAACGAGGGATTGGGCGGCTATGTTGGCTCTGGTCGTGTT
TCCACGTAGCACAAACCGGATGCATTGATCAGCGATCACAATTCACACGCCACAGAGATT
TTGAAGATACTCGTACAGTTTTTTTTTCTTTTTATAAATAATAATAATCATACAGGTCAA
CAAAAGCAACATTTTGCTTCAATTTGAAGATTTGTTAACTCTTATGCTTTTGATCGGCAA
TGCAGGAGTTCGAGCATCTCCAACAGCGGCGTCAAAAAACACGCGTGCGCTGTAAATTAT
ATTTTTATCATGCGCGGGACAAAATCGTGCGCTCCAGCGGACGCGGGAAATAACGCGCGC
GGTAAACTATTGCGCGCGAGAGAGAGAAAGCGGGCGGCCTCGCGCTAGATTTAACGCATC
GCTTTCATCGCGCCTATAAAATGTGGCGTTCGTCACGCGGCTGTCCATAGCCACACGCCC
TTTTTCGCTCCCTCTACTGCGCCATCTGCCGCTCCCTCGCCGTTGCTCCCTCTGCCGCTC
CCTCTGTTGCGCGCTCTGCCGCTCCCTCACCGTCGCTCCCTCTACCGCTCCCTCTGCCAC
CATGCCGCCGCACCGCCGTGGATCCTCGGGTTACCGCGGCATCCGCGAGCGTCTACTATG
ACGAGATCAGGTCCGGCAACATGCACCTCGGCCTCGGCACCTTCGAAACCGCGCACGAGG
TCGCCCGCGCGTACGACGTGGCGCCTAGGGAGGCCTCGTGCACAGATGAACTTTCAGGAT
GTCTACACGCGCGAGCAGATGTAGGACCTCGCCCCTCCACCTCGTTTGATATCAGACCAG
GACCGTCAGGAGCACCATCGGCAGGAGCGTCGGCTCCTCGTCGCCGAGGAGGACGAGCGA
TCCATGGCGGAGTGGCGCCGACGCCACCC