Contig Data
morexGenes
Links



Map Locations of contig_47696 (4295 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location No map location




Predicted Genes from contig_47696

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_63548 1 498 bp AK248719.1 Available Available None





CDS Structure of MLOC_63548






Contig Sequence (4295 bp)

>contig_47696 4295 assembly3_WGSMorex_rbca.fasta
GGGACGGAGGGAGTAGCACATAATAAAGCATGACAAATAAGCAATCAGAAGTTAGTTTAG
CTATAAGTGCTTAGCTTAACAACCACACCATTCATGTGATCGAAGGAGATGCGAATAATA
AGAGTAACAACAGGAAAGTTTACACTGGGTAACAGTATCAGTTAGTTGTTGCTTTATATA
ATTTCCCTGAGAATGTGTGCTTCTTCTCACTTGCCAGTCATCTCTAAGTGAAAAGATGGA
TGACTCATATTTGTGACAAAAATAATTCAACCAAGTAAGCAACTTTCTCTGGTCTGTCAT
AAAAAATAGATAACCTGTGGACTTTTTCACTTGCTTTCCAAAAATGCTATTTGCAACAGG
GACGGATGGGCATTTATACACATTCTTCCATGGCTTGGTTTATTTACTCTAGTACTCAAA
AATCTGCCACAACCCGCAATGGCATGTTGATTAGAATGTTTTCAATAGTTTATGTGCTAG
TAAAAGTAAAATACTGTCTGATCAAGTGAATATTTAGTAGCTGGTAACCATAATGTACAT
TTCATGATCAGTATTGGATATGTTGTCACTGCAAGTAGCAGAATGGATTCAGTAATAAGC
ATTTAAACTAGCAAGATCTGGTACACCATATCTTCACCTTCCTGATTCTCACGGTACCAA
TAACAGTATCAAAATACACAAGCAAGATAACCGTATCCCTCAACTAACAGAATATATGAA
TGTTCTCAATATCAAATATTAGTTGATAAAATACCTGCCGTGTTGGAAGCATCCTAGTTC
TGTATTTTTCTATTTCCGTAGCTCTGAGGTCCTGCCTGTAAGTGAGAGCTTTGCAATCTT
TGATCCTTCCTTGAAGTTCCACTGTGATTTTTCCAACCCTATGTGGATCGAAGACCTCGA
AATTTTTTATGTAACCTGAAAAAAATGTCCACAGAATAAATTTCAGGGAAAATTACCACC
GTAAAAGAAATGTTCGCATAAGACTGAACGAGGACAATGAGAGGGAGCGCATAGTAGCTA
ATACCTCGGTGCTTCATGATGTTGAGGAAGGAGATCATGACGCCGGAGATGGGCTGGAGT
TGCGCCGTCGCCTTCCCCCGCCGCTCCGCGTTCACCATCGTGCGCAGCGCGTCGTTGAGG
ATTCTCCGCCCCATCGCTCGCTCGATCTCCTCGCCTCTTCCACTCGTAGCCCGCTGCACC
TCTCGGCTCGCCTCTCTACAAGCCGCCGGCGGCGCTAGGGATGGAGAAGAGAAAGGTGGG
AATCAGGGAGGACTCATTAGCAGTGGGCCTGGCGTTAGGGAGAGAGCCTGCCCATGGCCG
AATGTGTGTTTTCTCATGGACCTGCGGAGGCTCTTGGGCTTGGTTCCACGAGCTGCTGTT
TACTATTGGATGTCCATGAGGCATCTCTGATCCATCCTTCTTTTTTTAATTATTTATAAT
CTTACTTAACATTTGTTTATTAAGACTCAAAAAAATTATTTATTTATTGAGATCTTCAAA
TTTAATTCATCTCACCTATTCCTAAAAAAATGGCAATTCACAAACAATGTAAATAACTGC
GTCACATCTTAACACAAACTTATACAATCAATTTGCAAAATAAAGAAGTGCACCACATCA
TAATTCAACAACGAGCATATACATAATTCATCCATTCCGACAAACAACTAAAACATAATC
ATATTTGAGTCAAAATGGCACTGACTGAACAAGTTCATTTCAAAAAAAAAAACACGGTGG
AGGCATCATAAATTACAAGAGTATCACACACACTCGTGTCATCATCACCGACACCACCAT
TGGCACCATCACCAATGTCGTCGCCACCACTACTAACTGACTTGGCCAACATCTCATGAG
CGAATTCCCAATATTGTCTCGCCCTCTCATCCATGTTATTTGGATCGAAGAACATGATAG
CATGATCCTTCGTCACCCTCTTGCTCTTCTGTTCCTCTATCTCCAGTGTAAGTCTTTTCT
CCTCAATCTTCATCTTGTTCTTTTGTTCCTGGGTCTTCATTACAAACCTTTCAACCTTAA
TTTTAGTATTTTTTCACCTTTCCCTCCTCGACCGCCACCTTTGCCTTCAACCTTTCCTCC
TCCATCATCTTGAGCCGGCACCAATGCCCTCTTCACATCCACCATGGCAATGAGCTCTTC
CTTTTATGCTCCAACACCTTCATTCTTCTTCACCGCCTTCGCATTTTTTTGTCCATCCGG
ACAGGTTTTAGGAGTGGAGAGGTTCTCTATCAATTCATCATCATGAATAACGTTGTTGAT
TCTTGTTCTCTTTGGTGTTGTTTCACAGTTCCTCCATGCCTACTTATCATTTCCCACAAT
AGCCTTGTAGCAGTTATGCAAAGAGAAGCCCTTGTTGCCACCACTCTTGTCCATTTGCTT
GTAAAGAGCGTTGATGATGGGCTCATACTCGTTGATGGACACTTCAGCTTGGCGGTGCTT
GGTTGACTTGATCAAGACAACCAAAACATTGGTTGCATTGATTTCGGATCACACTCTGAT
TATGAGTGAGATAACCCGTTGTGTGGTTGGAGGGAATCTCCACGTAGCTAGAATAATAAT
ATTCGATACTTCTTCAAAATGTTTAGTTCATTTGACCTGTCTGACCATGGCATAAAGAGA
GACACTCATCCATGCAACTCACAAAGCAAGGCCTTTAGTGTCGTAGTTGCATGACCTTCG
AGTCTTATTTCACATTGTTTGGGTATCGGGCTCCTCAACCTATTGAACCTCCACCTCTAT
GCTCTTATGGCTAGCACATTTTTATATCCCTTAAAACATTACCACATGAAATAAAGCTAG
TACCAAAAAACATGAAATGAAGCTACATTGTATCTAACAAAAACACAGCTGAGGTATTTA
CGTGTTGGCTATTTTCCGGATTCCGGTGTTTCTTCCCCGATTTTCTTTTCTTTTTTGTTT
ATTTTGGATATTCTTTCTTTATCATTTTTTTGCTTTCATGTTTTCCTACATGTTTTCGTT
TTTTATTTCTAACAAATAAGTTTTAAATAATATATAAACTCTGCTACTCCCTCTATCACA
ATTTAGAAGGCATGCACGTGTATCTAGGTCGTCAATGTTACTCTAAAATTTGCAGTAGAT
CAAAATTGAAATTGTACGGGTACATATTACACACATTCAATATGCATGACGAAGTTGTGT
TCTGTCCATCTAAAAAAGTGTGTCTTTTGTCATATACAGTGCTATGAGAATCTCCTTCAC
TCCTTGGTCATAAGGTACATTGTTTTTTCCGATAAATGTACAATATCTTATAACCAAACA
CAACTTTAAATAAGCGAGGCTTTATTAGCATCTAAAAAATCTATATGCCCCACTTTATAG
ATAAAGCATCACACACCGACCATATATCATCCAAACACAAACGGAGGTCCACAAACAGAA
AGGAAAAATAAATAAAAAGGTATGGTACACGCTGGGGGCAACAGCCAAGAGAAGCCCACA
TAAAAATCAATGAAAAGCCTTAAGGGGCATAAGTGATCATGAGAAGCCTAGCCGCCATGT
CTTTGTGCTTCCTCGTCAATCTATCAATGGCCACCTTGTCCTGCCGCTTGGAGAGAGTCT
TCCAAAGCTGCAAGAACCCACATAGTTTGTAAATCGAGTCTGTGGCCCTGGAAGGAAATA
TGTGTTCTGTGACTAGCTTATTCTGAACACACCAACTAGCTTATTCCGAACACACCAAAG
AGTCCAAGCCAAGGCTCCAAAGTTGATCCACATCAATCTTCGAGTCTGGCCAGTGCAATT
TCCCGTCAAGTGGTGTCATTCCGGGAAACAGGTTGGGTACCAATTGTTGCCCCAAACTTC
CCGAAAGCAGCTCCACAAGAACTGGGAGGACATCCAATAGAAAAGAATATGGTTCAGGTC
TTTTGCCACATTGAAGAGTGGGCATATCCCATCTCCAGGTCCGTTGTGTTTTTGCAAAGC
ACTAGGAATCAGACTACTGATTCCTACACTCCATCAGACTAGTGCGCTGCCGTTGGATCA
CAGCCTAGTGGGCCGTTGGATTTAGTACAAATCGAGCTCCTTCAGAAGCACGAGATATAG
AAGCACGTAATTTAGGGTAATTAATCCCAAATCTTTAGGAAACCGATCAAGCAGTTCCAG
GAAACAAATTTGGGAAGGATTAATGTAGCGTAAAGACTTTCCAAATGCAATTTTCTTCCT
TCTGAATCACATTTTATTTCCTTAAAAAGAACAGCGTAAAGACTTTCCAAATGTGATTTT
CTTCCTTATGAATCACATATTCTTTCCTGATGAAG