| Morex x Barke POPSEQ 2013 | Oregon Wolfe POPSEQ 2013 | Morex Genome Release 2012 |
|---|
 |
 |
No map location |
Predicted Genes from contig_47679
| Gene ID | # CDS Predicted | Max CDS Length | Probes in Cluster | FPKM by Treatment | FPKM by Replicate | Top Rice Hit |
|---|
| MLOC_63534 |
3 |
2555 bp |
MLOC_63534.2 |
Available |
Available |
LOC_Os01g65580.3, FRAME:+1, EVALUE:0.0, 13101.m07087 protein mitotic checkpoint family protein, putative, expressed |
| MLOC_63535 |
1 |
1563 bp |
MLOC_63535.1 |
Available |
Available |
LOC_Os01g65590.1, FRAME:+2, EVALUE:0.0, 13101.m07089 protein galactosyltransferase, putative, expressed |
CDS Structure of MLOC_63534
CDS Structure of MLOC_63535
Contig Sequence (9872 bp)
>contig_47679 9872 assembly3_WGSMorex_rbca.fasta
CCTCGCCGCCGCCGTCGCCGTCGCCACCGGACGGACCCCCGTCTCCGACCGCCGCCTCGT
GCCCTACGGCCGCCCCACGGCCCTCGTCTCCGCGTCCGGCCCCGAGGAGCCCTCCGGCGA
CATGGTCTGCACGTACCACTGCCGTCAGATGGTGAGATCGCGTCGTCCCTGTCTCCAACT
GTTTACAGCCTAGCCCTGTGTAAGCATATGAGTTGTGCAATTTGTGTTACTTGAGCAGCT
GCCACTCGGCGCCATGTATTACCAAGTTTGTTATACTTAAAGTTATATTTGGTCACACTT
GCTAGTTGCTACATTGATGAGCTCTCTGTTGATTGTATTTTAAGGATCTGCAGCGAAGTA
CACGCTGTAAAATGGAGATCCCTAGTGCGATTAGTTAGATGCCGGTTATAATATACATAT
TGATCCTTTTTCCATGTGTACATTACTGATAGGTGAAATCGGAGTTCGTGGTGGCACTGG
ACACTGCAGAGAAGGCGGTTCAGGAGTATCGAGTAATGCTTGACACATTGGAGAAACAGT
TATCCAAGAGTGGTATGCTTTTGGTTACATGATTTTATTCTGAGGTTTTTATGAATACAG
TTCATTAAGCTGTTAGGTAATTATATCTGTCTTGGAAGCAGGGAATAAGTGTTTGAAATA
TGCATGGACGTGGAGGCCAAATAACATACTATACTCCAAGTTACAGTATATCATAGTAAT
AAGTTAACATTTGTTGGGAATAGGAACTCCATTCTAGGAAGAACATGTAGGTTCTGCTTG
ATGCTCAAAGCTATCTGAGGCTAGAATTTGGATGTTAGCATTATCCTGTTGCAAACCATT
TGATGCATTTACTTACAAATTGATAAACTTACTTGTTCTTAATACTTTCAGAGGATGAAA
GGAATACATATCATGATAAACTGAACTATGTTGAACAAGACCTAGCAGCAACAAAAGGGC
GGGAGAGTGCATTGCAAGAACGATTATTGAAGGAGCTGGGCGAGTATCAGGAGCGATACC
GACAGCAAGTCAAGAAGATAGGGGAACTTGAGGTATACATTTTTTCCGCTTTGGCACATG
AACTCCATCTCATCGCCGTTGTGACAAGCTAGTCACATGGTCACATTTTTGTGTGCCTTA
TCATAACCATGTTTATTTATTGACATGACTATTCATAGGCTTGCTGGTGCTGCAGGTTAA
ACTCAATAAAGAGATTGATTCTCGAATTAGCGCCGAATCATCTTCAGCATCTGCAAAGGA
GACGGTTAAGGAGTTGGAACGGGCTATGCAGCGGTCATCAGAAAATTTAGAAAGGGAGAA
GAAAGCCCTTCAGAAGGAACTTTCATATATGCAAGATGACTCAAAACTATCCATCTCTAA
ACTTAATGCTGAGGTTTGTATTGTTAAGTTCTTGTGAACATTGGTTCTTCACTGCATGTT
GGCTTATCTATCTGAACATGCCTGGGCGTAGCTTGAAAGAATGAGCCTCAGGGCGCAAAA
CTCTGAGAAGGAAGCAAAGATGTTAAATGAGCAGTTGGAGGACATGAAAAAACAATTAAA
TGAGGTAAAGTTATTGATTCACGTGATCATCGCTGATCAATATGTCCCACTCCTTTTTCC
TGCCGTGAGAGCCCTCATCAGATGCTCAAACTCGTGCTCATTGGTTTTGGTTTTACATCT
TGGTACAACAGATACAATGATTAACATTATTTTCTTTGTCAGTGTCTTCGTGAAAAGAAC
GAAACCGAGCTCAGACTACTGGATTCTACTCCTTTTTCTGTTCAGCGTAATCCAACAGAT
GATCAGAAGTTAATAAAACTTCTGCAAGAGGAGCTCCGCAACTATGTGAGCATTTAGCCT
TGATGATGATAGCTGATGTTATGTGAATATTTGCTGGCATGCTTGTTTCATTTACTCCTT
GATAAGGAAAACCAATTTTATGACCGTCAGAATTATGTAAACACCAGTGTTACACATTGC
TGTAAGCTTACAACATGCTTAGTGTTAAGCAATGATCTAGGGAGAGTCTTTTGCTGCCCT
ATGTGTGGCTCTCTGAACTGCCATAGAAGTAAAGATGTTGAAGGTATGTAGGAAGCTCTG
ATCTTAACACAAGTGTGTTTGAATGAATGAATGGCTTCTTTTATGGGTGGCTGTACGCCC
CTAAGCATTTTGGTAGTGCATTTTGTACCCTTCAATTTAAGACATATCTGAGTTTTTTTC
CTGTCATGATACAGCTTTTCAATAATAGCCTGCCATGTAAAATTCCAGAATAATAAAGTT
CTGTATCTATATGATTTCTGTATATCCAGGAAAAAGAAGTGCATGAAGCTAGAAGATTAA
AATCTTCCTACACAAATTTTGAGCTGCTAAGTGAAAAGCTGTTGGAGGAGCAGAGTCGAA
GGAAACGAGCCGAAACAGAACTATCTAAGCTGCAAGAAATCGAAGCTAAAGCACAGAAGT
TGGAGCTGGAATTAGCGTCATGTACATCATTACTTGGCAACATGCCTGATGTGTCTTCTT
ACAGCAACATTGCAGATTTGCAAAGGTATGAGTCCATCATCACTTTACCAAAGAAAAATT
CTGCTATAACTCATCGCTATTAAACATTATTCAGAGTACTATCCTTTCCTATGATCATAA
ACACAACTGCGCAACTAGTACATTTGATAATTTCAGGATGACTTTTGCTTGAAAGTTGTG
AGAAAGAATGATATTGTTGGCAAGGACGTATAACTTTTTACTCCTTCTCCCATTAAGATT
TATTATTTGAACTGTTGACAGGCAAGCATTGACAGACTTGAATAAATTGGGTGAAGTAAC
ATCACGGTTGAAAGAATTGGAGGTTACGTTGGAATTTGCTGAGATCAGCAAGCAACGTGC
AGAAGGTGAAGCCACCTTTGCCAAAGAGAGAGCTGAAAGTGCTAGCAGGGAGGTCAAGCG
GCTTGAACTTCTGGTATTGTCTGCTGTCCCCTGCTACAAGTAGAACTAAACTGTGGCCTA
GGTTTCCATTTTTTCTGTGTTTGCAATGTATACCATAAATACACTTGCAGCCCCGTGCTC
CCATTGAACTAATGCTGCGTAAGCTATCTTATTAAGAGATGCTCCCTCCTTTCTGCTTTA
TAGGTCCTGCGTGTATCTCTAGGTTGTGAATTTTACTACTGTAATGTGAGTTGTATATCG
CAAAAGTTATACCATTTGAAAATATAACATTTGAACTTTATGTTGGTATATATTTTATAA
TAGATAAAACATATTATATTGGTTAAATTGTCGATCTAGGGATACACGTAGGCCTTACAA
ACCGGAAAGAGGTAGTACTCGCAGTTATGAATCTTCTATATACATTCTGTATTTACATTA
AGCGATCATCCATTTATATGTCAATAATTCACATTGGCATGCTTTACTTTCCCTTTATGA
CTTATTTCATTTGAACAGCTTACTGCAGTGAGTGAAGAAAGAGATAGATTACGAAAAGAT
CATAATATGTTATCTAACCAAAAAACTAGGGATGGAGATGACATGTCATCCAAGGTTAGC
AGGTTTTATATTCTTAACATTGGTGGTACGTGCCGTTACAACTTTTTTAATTTATAATGC
CTCTTCTGAGGAACAATGCAGAAAATGGAGTCAGAATTATCTCAAATGGAAAAGGTAGTA
AGAGAACTAGATAACACTCTACACGAGCAGAGAGAACTAATTAGTCAACAACACGCGGAG
CTCAATCTAATGAATGAGAAATTGAGCATTGAAGCAAGAAAAGCAAAATCATTGGAGCGA
GAGGGAGATCAACTGCGTTCTCAGGTGGCATTACTTGAGTCTAAGGTATGGACTAAGATC
AATGTTTACAGAATACGATCAATGTTTAATAGCCAGTGGCCAATCTAGCTTCTCTCCTTA
GCAGACCTGAGCTACTCTGGCTCAGGAGCTTGATCATATCCTGCCTGCGAATAAAACACG
AGTTTAGGATTGTTATCTAATTTTGAATTTCAATGAAGCAGCGGTGAATGTTATGCTGAA
TGACTGTTGTGTTCATATGTGTTATTATTTGTTATAGCACGGTGTTGTGCCGCCGAAGTT
TTAACTAGGCATGTCATCTTCCTTAACAACAGAGCTAGTTGTGGGTGCAACTATGAATTA
TGCTATGAAGTGTACTAATTTAACCTATAGTTATTTGCTTTGTGTTTTATGCGTCCATGC
CATGAAAATTCTTCTCATATTTGACAGCTGGGTCATGGGGATTACTCTGCCTCAAGCACA
AAAGTACTTCGTATGGTGAATACGCTTGCAATGGACAGTGAAGCAAAGGAGACAATAGAA
GCACTGCAAGCTGAGTTAAAGAAAACGAAAGAGAGGCTGCAGGCAATCGAAGAACTAAAA
GGGCAAGCTGGTAAGTGATCTTATGAATTCTTTTTACTATTACGATCTCCACATGTTGTT
TGAGTGTTTGAGGTTATCGTTTGCTTACCAATTTTTCAATTTAAAATTTCACGTGAGAAT
TAATGTCCACTGAGTAGCATGCAATAGTTAGTTTCGGTTTTTTCCGTAGTAAATTTGTCA
TTCTACAATTTCTGATAGCTTGCTCTTTGGCGTAGTTGCATTCCTATAAATAGACATCTG
CATTTTTCCTGAATAACTTGTTTGTTAATATATCATGTGCTCCGTATGTTCTCTGAGAGA
CCTTGTCTGGTTTTGCTTTGAATGCATTTATGCTGGAATATTTATTTTACTTGCAGATGC
TGGAACTGTGGTAGATGCAAATGTTGCTGAAAAGCTAGCACAGCTTAAAAATCAAGTTGC
CACACTAGAGAAACGTGAAGAAAGGTAGTCTAGTTTATTAATTTATATCTGTATAAGATT
ATGTATACTGATTTGTTTGAGAGGACCTTACACCTCCCTGGAAACAGATACAAGGCAGTG
TTTCTGGAGAGGATCTCAGTCTTCCGAAAGGCTTGTTGCTCGCTTTTTGGTTATCAGGTG
TGATGCGTTCAACTCTATTATTTTTTCCTGTTAGCTGTCTGAATCTCAAGAAGTTATGCG
TACTTGTCAGTAGCCTTAGAGCTTTATTTTAGCAGCTGAGACATCTTACTGTTCAAGCTA
CTTTTAGTAGCAGTATTTTTGCATGTACTGTTCCCAAATCAAGTCAACTGTTCTCCAGTT
GTGAGTTTCTCTTAATAGACTAGCAGCTTTTCGATAAAGGAAGCTACATATCTCATCATA
TGCCAACTACACTATTATGCCACAATTCTCATTATTTCCGGCTTCAACATTTCGTCCAAT
TTCACCTTGTTACTTGGTTCTAAGTTCTAACTATTCTCAGCTGTTAAACATCATTTTTCT
TATTTTGTGTTTTTAGATAGTGATGAATGATGAGCAGCAGCCAAATGGGATCCATGTAAC
ACGATTTACTCTGCAATCAGTATATGCCCAAACCGATGATGAAAAACTCGAGTTTCTCTA
TGAATCAGGAAGCACCAATATAGTGGTAGGTTCATTACATTGTTGAAATGTTCTTTTGTA
TAGTATGAGGGAGCATTTATTTGATATCAAATACAGGTCAATGGCTACACTTCTCAACAT
GAGATTGCTCAGCAGGTATTCAACCTATCCATTACAATGAAGCGTTTCCTTTCTGAAATG
TTCTACAAATAACCTGTAGTGCTGTTACAGTTTATAAGAGTGTGTAAGAGGCTTAACAGA
TTTAGTCCAGTTGGTGTATTTAGATCTCAAGCGTTATTAAATTGCGCACCAAAGTTTGGT
GTGTGATACAAATTACTGTGTAATAAACTAATCTGGGTATTAGATAGAAAGTATCCAGTC
ATACAGTTATGGGTACGGCGATGTTAAAACTCTTGCAAGTATAATCAAGTAAAGGAAAGA
ACGAATTGTTTTTAGTTTGATATTGAACCATAGTTTGATTTACTGATCTTGATTATCTAA
CCATAATTTTCAGGTCGATGTTTTCATAAGAAAGATGAAATCCATCCCAGCCTTCACTGC
TAACCTGACAATGGAATCCTTCAACAAGAGAAGTATATGCTAAGGGCCAAAATGAGTGAG
AAATCATATTCCTCTATTTTATTGTAGGTATGTTTCCATCTAAAAAGTGTTTGTAGGTAT
GATGCTTTATCAGTAGATGGAACAGAATATCCCCTTGGAAGCTTATGTATTATCTTTGCA
TTCTCGCAGCATGCCCGCCAAATCGCAACGTATTGGCAGTTAACAGAATGTGCTCATGAA
ACCTATCCAGGTTGCCCAATCCTCATGAATATTTTCAGCTATTTTAAGATTACCTGCGCT
CCTCTTTTTTGCATGGAGAGATTACTTGCAGTCGTATGTTGAATGGTTCTTTCAAATTCC
AGCAGATGAACAAGTGGAGTGAAAGGCTGGTGCTGAGTATGGTACTATCAGATGGATGCC
ATTTTAGTTCCAACAATGTAAATATGAGCGCATACATTGTAACCGAGAGCCGAAACCTGC
GAGTTTTGTGAACTAGCGACCTTGATAATATCATATCTTTTGTGTGGGGAGAAAGCATCA
AACGTGCCATGCATTTGCTATGCAAATAATGACCGTTTTCAGATGCAAACGGGCTCTTAC
TTGAATGAATCGCTATCAATTGAGCTAGTTTTATCCGTGGCGTATGCTACGGTCGTCCAC
AGTTGCTTATGCGTGTTGGAGCAGCCTTTGTAACTCTTTGCTCTATTGAAAGCATGGTTC
CTATCCTTCCAAGAAAAAAAAAGCACGGCTATCTTGACGCACGACTTAGCCATGCCTATC
ACCATAAGCAGGCAGCCGTAACGTAAACCCGTGCTTCCTGGCCAAGAACTCCCAACAGTT
CCGGCACAGTTTGAAGTGCAACCCAGAGGCGTGGCGTTCTTACCGCGAACTGGGCGAGCC
AGCCGACCTCGTTCTCACACTGTCGGCATGAGGCGCGTCACGCAAACTGAACCCCTCGCG
GTGCATCCGCAGGTGCCTCGGGCCAGGCAACGGGCAGATACCCGGCGTCTTTCGTAACGC
GGCTCCGCTGCAACACAAATCACCTCCTTCAACGGGTGCCCAGCCCAAGCCGCTCCTCTC
CGGCTGGGAGTTTCGAGCGGCCTGCTGCTTCCGGTGCAATGATGGTGCGTGCCCGAATGC
CCGATCCTATCATAGTTGCTGGAGCAACGCTGGTTCCGCGCGGCGATCGGAACTGATCCG
CGGGTGTGAAATTTTGATGCAGCCGCAGCCGCAGCTGGAGAAGAAGGCGCCCCCGCGGGC
GAGGCCGCCGCTGGCGGGGAAGGCCGTGGCCGCGCTCTGCGTCGCCAGCTTCGCCGTCGG
CTTGCTGCTCAGCGGTATCGGCTGGATGCCGCTCCTGTCGGCGCCGATCAGCAAGGTGAA
CAAGGCCTCTGCTCACCCCGGCTGCGACGGCAGCCGCGTAAGCAAGGAGTTGGCCGGGGA
GAGGCACGACCCCAAGGGTATCATGAGCGAGGTGTCCAGGACGCACCACGCTATCCAGTA
AGTGCACTTGTTTCTCACGAACCACCATGCATGTACTATGTACCACGACTGCACTGCACG
TACGTCACGTTGCTGACGAAAACGCACCTCCCCAGGTCGCTGGACAAGGCGGTGTCTTCT
CTGGAGATGGAGCTGGCCGTGGAGCGCGCGCGGGGCGGTGACGCCGGCGCGGCCAAGGGC
CTGCAGAAGGCCTTCGTCGTGATCGGCATCAACACGGCCTTCAGCAGCAAGAAGCGCCGC
GACTCCCTCCGCGAGACCTGGGTGCCCTCAGGTAGCATGTCATGTCATGTCATGCACGCG
CTTGGCGCCGGCACCGGCGCATGCAATGCAGCGACGAGATCATTATATCATGTTCTAATC
AATTGATTAATTTGTTGGTGGTATCGCGCGCGCGGGTGCAGGGGAGAAGCTGAGGAGGCT
GGAGAAGGAGAAGGGGATCGTGGTCCGGTTCGTGATCGGCCGGAGCGGGACGGCGGAGGG
CGGCGGGGCGGCGGACCGCGCCCTGGACGCGGAGGAGGCGGAGAACAAGGACTTCCTGCG
GCTGGACCACGTGGAGGGCTACCACCAGCTGTCCTCCAAGACCAGGATCTACTTCGCCAC
CGCCGTCGCCACCTGGGACGCCGACTTCTACGTCAAGGTCGACGACGACGTCCACCTCAA
CCTCGGTACGTCGTACGCACACGTGGTTTTTTTGTGTGTGTTCCTTATCGAGTTGAGCAT
TTCTGACCGTCCCTGCTCTTTTAATTTGGCAGGGATGCTTGCAACTAGGCTTGCCAAGTA
CAGGGCGCGGCCCAGGGTGTACGTCGGCTGCATGAAGTCTGGCCCTGTTCTCTCACAAAG
GTATAATAATCCGAGCGAAATCACGTGCGAAAAACTCGCAAAACCCAGTGAGCATTGCTG
CTGAATTTGCTTCCATCCGTCTTGTTCTCGTTGGTCGCAGAGGAGTGAAGTACCACGAGC
CAGAGTACTGGAAGTTCGGGGACGTCGGCAACAAGTACTTCCGGCACGCCACCGGCCAGA
TCTACGCCGTCTCCAAGGACCTCGCCGCCTACATCTCCGTCAACCAGTAAGCTTTCTTCT
TCTTCTTTTCTTTGGAAGGCCATCCGTGAGACACTACCATTCTGACGAAAATGATAGATG
CTCCTATAATTCTGATGATGTTTGCATTTACGGTGAACTATTTCCAGGCCGATCCTGCAC
AGGTTCGCGAACGAGGACGTCTCCGTGGGCGCGTGGCTGATCGGGCTGGAGGTGGAGCAC
GTCGACGACCGGAGCATGTGCTGCGCCACGCCTCCAGGTCCGTACGAACGCACCGATCTC
CCTTCGCCCCTGCGAGTTCGTCTGACCGGAACAACGGCCGTGCGTTTTGCAGACTGCGAG
TGGAAGAAGCGGGCCGGGAACGTGTGCGTGGCGTCCTTCGACTGGTCCTGCAGCGGGGTC
TGCAGGTCCGTGGACAGGATGAAGCTCATCCACGACGCCTGCGGCGAAGACCAGGCGGCG
GTCTGGGGCATCGCGACGTGATCTCAAGTAGTGCTAGTGCTAGTGCTGGTGCATCGACCG
GCCGGGCGTGCTGTTAACGTAGCTAGCTAGAGCTTGATTGGAATCCTATCACTTGGTCCA
ACGCTATGCATGGAGTGAACTCTGCTGATCACACTGCTGTAGTGGCATCATCTTGCGTGA
CCATATGGGATTATACTATATTTGCAGTTGATGTCGCCATCTTTATCATTGTTTTGATGC
CGGAAATCGGGATTAGCTGCTACACGGGAGAGCTTGTCACTTCTTTTGCAATGGAGCAAC
CTACCTATGCTCATGGAGTCAAACTTGTTTAAATATATTGTGAGTCTTCTTTCATCAATT
CGGAGTTCTGAATGAGTTGACAGGTGCATGCATTCAATACGATATCAAAGCCAAAAGGTC
TTGAGTTCAAGACTCTACCAGCACAGTATTAATAAAAAGATTCTGCGGCCTACATCAATC
CCACGTCTAAGGACTAAAATAGCGTGAACGTGAGGGAGAAATATATTACCTGACTCCTCC
ATCAGTTCAGACTTTTAAAGCAATTGGTTGGAGCATGAATTTAATAAAACCGTCTCAAGG
TTGTAAATCTTGTGAAGAAGGGAGAAATGGATATGTCAGTGCATAGCGCTTCTTATTCAT
CAGATCAAATCACTCATGGATCAACAAAATTCTCGTATTGCTCACATTTCGCTTAGTTAG
AACAATGTAAGTCACTTTTGGTAGGACTACTGGGACGCGGATTTTGTCTAACTCATTGTG
GACGTAACCCATATCCTGTCCATCCATCCTACATGCATGTCAAATCAATATTTCTACATG
CATGTAATATCAACAGGCTTTATGTACCTTTC
