Contig Data
morexGenes
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Map Locations of contig_47673 (4833 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map locationNo map location




Predicted Genes from contig_47673

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_63532 2 1658 bp MLOC_63532.1 Available Available LOC_Os01g53220.1, FRAME:-3, EVALUE:1e-93, 13101.m05575 protein HSF-type DNA-binding domain containing protein, expressed





CDS Structure of MLOC_63532






Contig Sequence (4833 bp)

>contig_47673 4833 assembly3_WGSMorex_rbca.fasta
CTTGTGGCGAGTGTAAGGCAACTCCTTATACTCATCTTTTCCGTACATTTACTTATAACG
ATATCCATTCTTGCGAAACAACGAGATGTGTTTCTATCCCTGTTGAGGCCCTTGCGCCAA
AATAAGGATATGACCGCATCTTGGGAGTTACAATGGCGTAGGGTTTTACCTCCATCATCA
CATAGGATATCTCGAGACCATGTTTCTGAATGGAGCTCCGGGAGTTTGACCAGAACCATT
CCCGCGCTTCCTTCCAAAACCCCTTTGCATGTGTGCATTTAATCAATGCACGATACAAAT
CTTCGTCCGCACCAAGGCAGACTTTGTAGCGCGCCAAATCAGCAACGTGTGTGTGCTTCA
GAGTGCTCTCAACAGGTAGGATTTCAGACTTTTGACACAACTTTCAGCTTCTAGAGCCTA
GACCATGATTGTTTTTGATTCTCTGAAGTTTAAGTAACCGCCCCTTCCTCTAGAGCTGAA
TGCTCGTTATTTGTCATTAGAGAAAAGTACGCGGAATTTACAGTGTAGTTTCCAGAATTT
TCAACAACCCACGCCCACAAGTTAGCCCCTCCATCTATCCCCAAGGGGATATTTAGAATT
GCATCTGCTTCCGGGATGATAAAATTTTGTGTGACCAAATCGGCTCTTCATGTTCCATTT
TCCTTATCAATTAGGTCAGCCACACGGGGAACGGTCATGTTTCAATATGGACTGAATGTC
TTAGGGAGATGAGACCAATGCGGTGTAACCTACCGGTTCAGTGCTATTTCCAGCTCGAAA
AGAAAATAATGAATGGACGTCTATATTTCTTACAATTGTATTTAGTAGGAAAACGACAAT
TCAAACATGCTCCCATTCTCTTACCGGTCCGCAAATCCGCTTTACCAGCAACTATTGCCC
TCCAAGTAGCGGATGCCTGTTTAAGAAACTGTTGCCTCCATGAACTCACTTATCCGTTTA
AGAAATTGTTGCCTCCATAAACTCACTTGTATGTTTAAAAAACTGTTGCCTTCATGAACT
CACTTGTCTGTTTAAGGCTCTGTTTGTTTCAGAAGTCTCAAGACTTTTTTAGTCTCAACT
AAAAAGTTTCTAGTCCCTATCCATTTGTTTTCATGGACTAAACAGGGACTAGAGGTCATA
AAATGACATGCAAAAAGATCATGTTACCCCTATTAATGTAGTAGAAGTTATTAAATGACA
TGCTAAAAGTAAGGACACTGTTAGAAAAAGTGTAAAAAAAAGTCTCAAAAAGACCTTACA
TAGGGATTTTTTTTCTTTAGTCCCAAATATCCCTTTTAATCCTTAAAAATCTCTTCTGTT
TGTTTCATATGGGACTAAAAATAATTTTTTTTAATCCCTGCACCAAAAATCTCTGAAAAC
AAACACCCGTCAAAAACTGTTGCCTCGATGAACTCACTTGTCGGGAAATATTTTCCTTTT
AGGACACGCGCACAGAGGGAGTCGGGATTTGTGACAAGTTTCCATCCATGCTTCCCAAGC
AAGGCCAGATTGAACTTTTCCATGCCACGAAATCCCACCCCGCCAGCATTTTGAAAAGGG
ACAGTTTTGTTGTTTTTCACAGAAATACATACGTATACACATACATATAAACACCAAAAC
ATCACACGTGTACACCTATCTATCTACTCTCCACTCTCAAGGTCTATTAGTAGAACACGT
GTCCCGCGTTAGAGAAGGGGAACGGCACGGCCCTGCTCTGTGCTGCCTCCTCGGCCTCGG
CCCCGATCCGCCTCCTCTTATCTGGTCTTGGATCCATGCCGCCGGCACCGGCTGCAGCCA
GCTCCTCCTTCTTGGCGACCATGGCGCGCAGCACCACGCCCGGGTCGTCCGCGAGCTTGC
CGAGGAACGCCATCATCTGGCCCGGCCGGTTCTCCGCCGCGCGGAGCCTGCGGTCCATGG
CCTGCAGCTCCTCCTCCATGCCCCTCCGCTCGTCCCGCAGCCTCTGCACCGCCTGGATCG
TCCCCCGCACCTCCTCCTCCTCCTCCTCGCACACCTCCCTCCCCGCCGCCCCGGCGCCGG
CCCTCTTCTTCTTGCGCACGATCAGCGGCAGCAGCTTCGCCTGGCCGCGCAGGAACGACT
CGTGCGCGAACTCCCACATGTCCGGGTCGACCTTGCGAAATCCCTGAGATCAAAGCTGGT
ATGAGCACGACCACAATCGAGGCCGGAGCAGGGTAGGCATAGAATATGTAGAGAGCGCGT
GCGTACGTAGGTGTTGAGCTGGCGGACGAAGCTGGCGAAGTTGCGGTGCTTGAAGTAGGA
GGGGAGGAGGTAGTCGGAGAAGGCGGCGGGGTCGAGGACGAGGAAGGTGTTGCTCGCGCC
GCCCCAGCACACGACGGCGTCCGTGGCCGGGTCGCTGACCATGTGGAACGTCTTGGCCAC
GAACGGCGCGACGCCGCCGTCGTCCTGGTGCTGGTGGCCCTTGCACTCGCTTCCCATGGA
CGACGAAGCTGCAACCGGATAAGGAAGCCGCTCGCTCTTCCTGCTCTCTGCTCGGTGTGG
GCTTGTTCTCTGTGGGGAGTCACTCCTATCCTATGCGTGCGTGTGTGTGTGTGTGTGTAG
GCGGGCGCAGATATTTCGCTTCCGGGCTGACGATTTAAAGGAGAGAAAGTATCTACTCCT
AGTAGCTCACTCTGTGCGTGCCGACCTTGTCGATTGTCGGACTCGGAGCGTGCAACAGAT
GGCGGGTGTTTGGGTTAATGCTCTGTGGCGGTAACAAATGGAGGCGCCATCTGATTTGCG
CGGTGATGTGGCACCGCACCGGTAGTGCGAGATTTTTGAGAGGATTCGGTGTTTGTCGCG
TACGGGACACGTGTGGTGCCCGGGTGTAAAGCGTTGCGCTGTCCCTCCTCGTCATGGCAT
CTCCGTTCAAAAGCGCTCGCCTTTTTCCTTTTCAGCATGCAGTACGATATTTATGGGTGT
ATTGTATTTTAAATGGATATAAGAAATGAACTAGTATATTTATGTTTAGTTGGAGAAAAA
AGAAGAGGAAAAATAATGTAAGTGAGATCTTAGTTAAGGCATGTACTTCTTCCGTCTTAA
AATAACTGTTTTAATTTTGTACTATACCTAGTATAAAGTTGTATTAAGCTTAAGACACTT
ATTTTAGGACGGAGGAAGTACAATGCAGAACCTCAAGGTGATGCACCGTATCGATGCAAA
AAAAAGGTGATGCTCCGTATGTCCTGAAGGATTGGATGTCAAAAAAAGTACGTTCGGATA
TGGAAGTGGGATCCTATGCAGGAGGCGGGTGTTTGAAGAGAAAATGTGTGGTCTGATGTA
AAAAACTGAAAAAGATAGAATGAAAAATAAAGATACATGTGTATTAGAGTCTTTATAATA
AAGATAGAATGAAAGATTGATCTTATAATAAAAAATAATATATTTTTTAATCAATTATTA
TACATGTTAATTATAAAATGAATTATAAATGACATGAAAATGACTTATAGCCGCCCCTGA
CTATACTACTTCCTTCGTCCTGAAATAATTGTCTTAGAAATGAATATAATGGATGTATCT
ATAACTAAAATAAATCTAGATTCATTCATTTCTAGAACAAGTATTTCGGGACGGAGGGAG
TATTAAGTAGTAACCATGCTCTGAGATCACCGGAGTGAAACCTCTGACATGTGTTAACCA
TACATCGATGCCACCACTAGCAGGTAACAGTACTGCTCTTTCAGAAGAGCTAAAACGACA
CTGTGACAGGTAGCTGTTTGAAATCATGTCTGTTTAGATAAGAAATCTGCAGGTGGAACA
GGCCAAAAATGGACACCCTCTCGTGTACGGTACACTCTTCAAGGCTTCCACGACTGGAAG
ACCAACACGTTGCTATTCGCGTCAAACAAATAGGAGTAAAAGTCACGCAATGACCACGAC
GAAGAAAAATGGTTGAAAAGAAGAAGAAGAAAAAAGTTGAAAAAAGAAGAAGAAAAAGGT
TGAAATGTGGATCATTCGTGCCCTTTCGTCCCGAGCCGACCGTCTTGACCCAAAGCGTAA
ACGGAGCCATCAGGATGGCACCTGTGGCTCACATCCTCTGTCACGCGGATGGTGGCTGCC
AGTGGAAAGGAGCACCGCGGGGGTGTCGACACCTCGCGCCCTCCGCGCTCGAACACGTCG
CGCGGCGGCACGGCCGTCGTTTTGCCCGCTGCCCTTTTCAGCTGGTTGATCGAGGCTGGA
CCGCTCGAGCGTGCTCGCGCGGCATTGGCCGCATCCCGTCGTGCGATCCCCCGACCAGTT
TATCGCGCGTAGCCGGCCGTGTCATCCACCAGCGATGCACGATGCTAGCCGCACTCAGTC
GATGGTTTTGTGGACGTAAGAGTTTTGGGCGCCCGGATTAGAGCATCTGCTCCCTTCAAG
GCTGGACGCCATGTTAAATTTCGGTCAATATATGACAGCATCTCTACCAAACCCTATATA
AATGTTCAAACCCATAAAAATTAGGGCAGTGCTATGCACCGGCGCATCGGCCGGCCGCAC
GCTGGCTGCACGATCCACCAACCCCGCGCGTCCGCCCCGTTGGATCTCCATGCAATATTT
TTTTCTCCGATGCAACAAAATTCGACGCGATGCAACAATTTTTTCAACGGTTGTAACAAA
AAACAAAATTTGTAGAAAAAAATAACTACGTGATCGTAGCAAAAAAATGAAGTTGATGGT
GCGTGGTACCAAAAGTCAAACGCTGGTTGTAGCAAATATCTACGTGAACGTGTATGGAAC
TTTTTTAGTGAACGGTTGCAACAAAAAATGATGCTTGTTGTAGCAAAAATTAACACGGTT
GNNNNAAAAGTAAAAAACATCGATTGTAACGAA