morexGenes - Barley RNA-seq Database

Contig contig_47667
Source Contig contig_47667
Contig Data
|Contig Location|
|Microarray Probes|
|Predicted Genes|
|CDS Structure|
|DNA Sequence|
morexGenes
Links
Map Locations of contig_47667 (6757 bp)

Morex x Barke POPSEQ 2013	Oregon Wolfe POPSEQ 2013	Morex Genome Release 2012
		No map location
Predicted Genes from contig_47667

Gene ID	# CDS Predicted	Max CDS Length	Probes in Cluster	FPKM by Treatment	FPKM by Replicate	Top Rice Hit
MLOC_63524	1	518 bp	MLOC_63524.1	Available	Available	None
CDS Structure of MLOC_63524

Contig Sequence (6757 bp)

>contig_47667 6757 assembly3_WGSMorex_rbca.fasta
CATCGACGCCAAAAGCGTGGAGCTTTCGCTCGGCCCCCACAGGTACGCCCCGAGCCCCCC
CCCCCCACACACACACACATACACGACCACCAAGGGGAGCCACGTGCGCGGCATGCAGCT
CCTGCCGTAGCCCCTTGAGTCCTCGCCGGCGCACCCCGTCACCAACGCGCTGCCATCCGC
CATCGAACATCGCCCGCGCGAGGTCCTGCACCCGAGGGGAGAAAAGTCACGTTGCCATCG
ATGCCGAATGGGCCTTGTCGATGGCGGCGAGGAAGAGAGGGGGGAGGAGGGTCGAGGAGG
CGGCAATGCCAGGGTTTCCCCTCGGTCGCCGTGCGAAGGCCACACGGGAGGGGGCGGGCA
CGTCCATACACACTAGGCCTTCGTTTGTCAATTTAGACCAAGCCACACCCTTTGTTCAAA
GGATCTCCAAAGAATTTTTAGGAAGATTGGGATCCTTAGAAACTCCTCATGTGTTGTTTG
ATTCGTAGGATTGTGATCTATAATAATCTCCCCATGGAATCCGTTTATGCTAGTAAGTTC
TATAGGTAAATCTCCCTCCGTTCCAACCTACTGGAAATTACTCCGTGTCCTCTGATGCCC
ACTACCAAAACACCCATTCAATCATGCAGGATTCAGGTGGATGCAACACAAGAATCATGT
GTTTTTTCCATTCAAGCGTTCCTCTCCAGTACAGTGAACCAAAAGAGACGCTCAAATGGA
GCAGCACTCGACTGATCGGAGTAGGTGAAGGGGGCCTACGCATTTCAACACAGCGAAAAG
ACGAAACGGCATCGAATGCAACAACCAGACGCTGCGAATGTGAGGACGAAGAAAAGGAAA
GAACCCGTGGCGAGCAATCGAGCAGGACGCGCATCAGGCGTCCGCATCCGAACCACTCCC
ATCATTTCCGTTCTTCTTTTCTCGCGAATGAGCATCACCGCGTCCACTGTTACTTTGGCT
TTGGCTTTTGTTGCAGGCACGTAATTATCTTCCACTTTGGCTTTGGGCGCAGGTAATTAT
CAGATGGGCACTTGCCGCAGGGCCCTCCCCTATGCGCGCTTCGATCATGGCGTCTGCATC
TCTGAACGGAAAAGAAAAGGTCGTGTTCAATTCGGCCTCAGGTTTTGCCTCTCGTGGCCT
TGCTCCGTTCAGGCGATTGGAATGGAACCCGCAGAGATGGCGAGAACAACCGTACCGGAG
GCTGCTACGAGATGCAGATATGACATGGACCGTCACCATCTACTACGATGTGTGCAGCCC
TGCTGAGCTCGGCCGGCGCGTGAGCGCGACGGAACGATTTTGAAGGTGGGGGGAAAAGAG
GTGGAAACAGAGGAATGGAAGCCGGAGAAGGAACAAGAGGAAAAAGAGAAGATAAAGAGG
GCCGCTGTCTCGTAGAACCGGACAGGCCTTGGGGTCTCCTCGACCACACGTTGCAAAAGT
GGCAAAGGACGCCGCGGCCCACTCTACTCTAGTAGTAGTACAGCCGCTCCATGCCATGCC
AGGCCAGGCCAAGGCGAGCCGAGCCGATCCGATCCGATCGATCGAGTGCCGCGCGGCGCG
GGGCGAGTGAGGGAGAGTCGCCGCGCCCACGCGCGCCCATCACGTCTCGCCCGCGTCGCT
CTCCGGCCCCGGACACGCCACCACCCCCATCATTCCGTCTCCCTCCCCTCCGATGGCGTG
CGTCCCCCCCTTGGCTAGATTTGCGTGATTTGGGGTCGCGGTGGCACGACATTCTGATCA
GTCGGTTACGTCGTCGTCGGAGACGAACACAACACCGGACATTCGCGAACGTTTGGATCG
AGGTCGGGACGCGCAATAAGAACCACCGAACGGATCGAGGTCGGGACGCGCAATAAGAAC
CACCGAACGAATCCATCCACCACGCCATACGTAACGTGACATGACACGAGGACAACCAAA
TAAGACGAAACAAAGACGTACCGCTCTCCCCTCCGGAGCAGAGTACAACCGAGAAAAGGA
AACGGAGCGCTACCAAAGGAAGTCCGGCATATGTACTACTACGATGCTCGATCGATCCCA
AGAAAAGGAAGATCTTTGTGCATGTGCGACGGCGACGGGGACGATGGGCACGCCGCCGGC
TGTACCAATCCCCTCCGGCCGCAGGGCCAGCGCACCAAAGGGGGAAAACGACCAGCCGGC
CACTCCGGCGCCGTCTCGCTCGCCGGTCTCTCTCGCGGGGGGTTCCACGCCCACATCGCT
CCCATACTGTTCCAACCATCCGAGTTCACCAGCCACCGTTGTCGACCACTCCGCCTCAAC
CGTCGCCGGACACGCGCGCCGGCCCGCCACCACCACGTCACCGCAAGCGCCAACAACGAT
CGCAATCACAACCATTTCGTTTCATTCACACTTTTTTACTGGAAGAATGGATGGGAAGAT
AGATATAGCAAGACGTGCGCAACACAAGAAAGAAAAAAGGGGCAAAAGGGTAAATTATTT
TACCGATATGATATGATATGATATGACAGGAGATAGATAAACATCATTTACTTGATAATA
GCGAAGGATTACACAAATACATTGGGGGGGGAGTTGATTCATCGCCATTGGATGAACCAA
GGATTAAAGGCCGCTAAGCGGCTAAGGCAGTAGTACAAAATATGGTGTGGGGGATCGGAT
CGTCGATCGCCATCCTTACGAAGGATTACATTAATTAACAAAATGTGAAATCGGTCGGTC
TTCAGCTAGTCCAGATGATGCACTAACGAGGACGATAAAGAAACAACAACAGCGCCAGTA
ATCACAGGAATCAAGTCCACCTTCCAACCCTCTCATCGTCACCACCACCAGCCAGCTTCC
CTTCCATGCTTCACCACCCACCCTTCCACCTATGCACAACACAACAGATAGGACCACCAC
CATCCAAGTTCCAATCCACCTCTTCCCTCCTTTTTTTGGTAATTTTTCCTTTTGGGTAAA
TTCCTACTTCCTCAAGAACCCCAAAACAAATCCACCCATCCTCCTCCTTCATCTTGCCTC
CCTTCCGCCAACCAGGAATATTCACATGGGAGATAGATAGCAGCTATGTACAGGAATTTG
CAGCAACTTGAAATAGCAAAAGAAACTTGAGGATAATTTTTTTGGGGTGCCATTTTTCTT
CCTTCTTCTTCTTACCGCCACCTCCGTCATGCCATCTTGTTGAGCGACTCCGCAAAGTAA
ACTTGGAAGAAGGAACGGGCTGCCTCAGTTGATGAGGTCTGAGACCCACCCGACGTCGGG
GCCTCCTCCTGCTCCGGCACCGACGTCGCAGCTGCGGGGCGCGGCGCCGTCTCGGCTCAG
CCGCTCGAACACCTTCTCCCGGAGCGCCCTCCCGGACTCCACCCTCTGAACCGGCTCCTC
GTCGTCGAGGAAGCGGAGGTTGAGTGGCTCCAGGTTGGCCATGAAGCTGGAGGCGCTGGT
CTGAGTGCCCATGGGGGTGGTGGGGAGGCTGTAGAGGCCGCCGGCCTTGGGCGAGCCGTA
GGCGGCAGGGGAGGTGGGGTAGGCGGGCCACCCACCGGACGGCGACGCCTGCGCCTTGGC
GAGGCGCAGCTGGCGGAGCGAGGCGAGGACGTCGTTCACGGGCGACCCAACGCCGGGCCA
TGAACCGCGGCGGAAGGAGGCGGCGGCCCCGTCGGGAGACAATGGCGGCGACTCGGACGG
GGGCGACTTGGGCGGGGAGGAGAGCAGGGTGCTGGTGGGCGAGGAGGACATGATGCTCTT
GCTGAGGTAGCTCTCGAACGCCTGGCGCCGGAGCGGGGAGCCGTCGTAGGACTCGGCGAG
CGGGGACAGCGGCGTGCTCCTGGGGCTGGAGTGCTGGGACGGCATGGCGCGGAGCTGGTC
GGGGGTGTGGGCGAAGAAGCAGACGCGGCGGCGGCAGGCGGTGCCGTCCTTGCAGGGCTG
CGTGCGGTAGCGCGCCGGGTGGAGCCAGCACTCGAAGACGCCGTGCGCGTACTCGCAGGC
GTCGCCGCGCTTGCATCCGCCCTTGCGGAAGTCGGGGCAGGCGGTGCCGGAGTAGTGGTA
CTTGCGCGGGTCGCGGCGGCGCGCCTTCTCCCCCGGGTGCGCGAAGGGGCACTCGGTCCA
GTCGTGGCTCCGGCCGCGCGCGCACCGGCGCACCTTGAAGTCGTACATGCGGAACTCGTC
GCACGCGTACGCGTCCACCGCGGCCGCCATGGCCGCCGCCTCGTCCTCGTCATCGCCGCC
CGCGCCCGCCATGTCGTTGCACGGCAGGTACTGGCGCAGCGCGGCGAACAGGAACGGCGT
CTCGTCGCCACCGCCGGCGTCGACGCCGCTCACCGGGAGGTTGCCCCACGGCGGCACGCT
CACTCCCTCGCTCATCATCATCATGTCTAGGCTGAGAGCTGGGCGCTGCCTCTGCTCTAC
CGTCTGCTCTACGGGAAGGAAGAGATCTGCTAGTGGACTGAAGGTGGGTGGGTCTCGGAC
GGATTGTGGAGAAGAACACCAAGCGGCGCGCGCTTATAAACACCCTCGCCCACAACCACA
GACGGCGCGGTCGTACAAGCTAACTGACGCCGTTGCCTCCCCGCACGGCGGTAGCCAGGC
AGCCACCCCGCTGACCCCGCTGACACGTCGCCCCCACCGGAGTCCCATGGCCCACGGTCA
GCGAGAGGGAACGAGGCGAGGCGGGGATAAAGGGGCGGTACGGAGCGATACACGCGGCGG
GCGGGGAGGCATGCGGGAGGGCGAGGTGTCTCGAGCGGGGGACGGGTCAGGGACACGTCG
TGGAGTGGGGAGGGAGGGAGCCCTACGATCTTTTTTTTTTTTTTTTGAGGGGAGCGGGCT
ACGTGTATAGGTTGGGGGTTTGGGGTTTGGGGTCCGGTCCGGGGGAAGATATTGGGTTCG
TGTAGTTTCTGGAAACCTGGGGTAGGGAGTGGTGGCGCGGCTTGGACAGATGCGTGCATG
CAGATGGGTGCTTGCCCTTTTTTCCTTTTTTTTTTCTTTTCTTTCCCAACTCCCGAGCGT
GTATGTGTACCGCTGCACTCGCATGTGCCTGTCACCGGTTTGGCTGCGTCCGATTTTAGA
ATCGTCCTGCCTTTCCACTTAGCGTAGGAGCAACTATTAACTATGCTCCGCTGGATTATT
TCTCTCTGAAGGAGTACTAGTGTGGCAAAGAATTATTTTGACTGTTAACGTCCGTAAATT
CCGTAAGAGCGTCTCCGATAGGTTATTTATATGGATGTCTATATTCGTTTTTCAAGATGT
GAGACCACAACAGGCGTTCAGTAGCTTGTCTATGCAATCATTCAAACATGTACATTTTTC
AAATCGACATTGACAATGTGAAGACATCATCCAAACTCAATTGTAGTCACAATTTCTACC
TTTCATCCATCATGGTCTCCGTATATATATATATATATATATATGTTTTAATGCAAAATT
AAATTTAAAGTTGAGAAAAATAATAGATTATGATTTATATAAATATTAAAATATTAAAAT
ATACACATGCTATTGAAGATGCTTTAATAATAACGGTTGTTGAAAACGGACATAGATCCA
TGAGCATTCTCCTGGGTGTAAATAGCAAATATTATTCATGAGTGAGAAATATTGATCAAA
AGATAATCACAAATATCTTAAGAGGACAGAACTAGATATTTGTGTGAGGGTAGGGGGAAA
GTTTCCAGGATGTCCACATCCATGTAGTTCTAAATAATTTTATGTTAGAAACCTAAACTT
AGCTGCTAACTTAAACTGGGCGTATTATTATTGACAGTTGGAAACGTTGGAGATTTTCTA
GACGGAACAGCAACAAATATAACAAATATCTAACGACACGCGCACACATAAGCTTACAAA
GAGGAACTCTAGCAAACCCCATAAAAGGTTGCGGCTCGTAGAATTTCGGTAGTATACGGA
TTGGTCCTTTTTTGACCAAACTAGACTCCGTATATTCGGGCCGGTCCGTAATCAAATTAG
AGTTGCCCACAAACACACACGTCACCCCCTTCACCCCTCTCGTACGGTATATATACGGAT
GCGCAAGGTCGATACTCGTCGAAACCCTATGTTTTTGTCGCCGCAATTCCCCATTCATCG
CCTCTATTTCCCTACGTCGATGGCTAAAGTTCGCCGCCCACCCGTTGATCCGCGGGATGT
GGAGCTTCGGCCGGCGCGACAACAATAACCTCGAGCAGAGGCGTTGCGTCATAGCTGGTG
TGGCATGGAAGCGCTCCGCCCTACAGTACACGAACTGCGGACTTGAGCCACCGTCGTCGC
TCCTCCGCCGCTAGACGGAGGAATACGACCACACACACAGCGCTCTTCTTTAGCGCATGC
AGCTCCTCCGAGGCGTCGAGCTCCCGCTCGTCGCACACCCCAATGAAACGGGAGCCAGAG
AAGCTTCCCTCGCTCCGTACGGTCAAGAAGGAGGCTGAGCGGCGGGGCGATGGCATTGCC
GAACTAGAGGACTTCCTCCCTCTGGCTCTGGTGAAGGCGGACGCCATCAAGGCCGCCATT
TTCGCACGCAGTGCGCGGTAGGAGGAAGAGGAGTTGTAGCGTCGCTCGCGAAAGGATAAA
ACCAATGTTGTGCTCTACGGGTAGGGCCTCGCGAAGGCCATCGCGTTCGACGAGAAGGAG
GTGGCACCGTTGTTGGAAATATGACCTAGAGGAAATAATAAATTAGTTAAAATTATATTT
TCTTATTCATGATAATCGTTTATTATCCATGCTATAATTCTATTGATTGAAAACTCAAAT
ACATGTGTGGATACATAGACAACACACTCTTCCTAGT