morexGenes - Barley RNA-seq Database

Contig contig_476558

Source Contig contig_476558

Contig Data

|Contig Location|
|Microarray Probes|
|Predicted Genes|
|CDS Structure|
|DNA Sequence|

morexGenes

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Map Locations of contig_476558 (466 bp)

Morex x Barke POPSEQ 2013	Oregon Wolfe POPSEQ 2013	Morex Genome Release 2012
No map location		No map location

Predicted Genes from contig_476558

Gene ID	# CDS Predicted	Max CDS Length	Probes in Cluster	FPKM by Treatment	FPKM by Replicate	Top Rice Hit
MLOC_63513	2	214 bp	MLOC_63513.1	Available	Available	LOC_Os03g60090.2, FRAME:+1, EVALUE:1e-26, 13103.m06596 protein methylenetetrahydrofolate reductase, putative, expressed

CDS Structure of MLOC_63513

Contig Sequence (466 bp)

>contig_476558 466 assembly3_WGSMorex_rbca.fasta
TCCAAAACTCTCGCGCCTCAAGACTTTGCACCTTTACACACTAAACATGGAAAAGACCGC
TTTAGCAATTCTGATGGTGATTTCCTTGTCTTGCTTGGTTTAATTTTTTGCTCTGACGAG
TTTCTAACAGCTAACTATTGTTTCTCCAGAATCTTGGATTAATAGAGGAATCCAAGATTT
CAAGAACATTACCTTGGAGGCCACCAACTAATGTTTTCCGTGTCAAAGAGGATGTTCGTC
CTATATTCTGGTAAAAAAAAATTTCTGATTTTTTCTTTGTGAAAGCTGATTGACTATTAG
TACCACACATATACTCATTCAATCTTGTCTTTGATATAAGTGAGCAGGACCAACAGACCA
AAGAGTTACATTTGAAGGACCACTCATTACTAAGAAAAGGCCTGCTAGTGGTGCACCTGT
TTTGGCTACTAATGTCGCACTATAGATGCGCCACTAGCATCACGCC