morexGenes - Barley RNA-seq Database

Contig contig_47654
Source Contig contig_47654
Contig Data
|Contig Location|
|Microarray Probes|
|Predicted Genes|
|CDS Structure|
|DNA Sequence|
morexGenes
Links
Map Locations of contig_47654 (8948 bp)

Morex x Barke POPSEQ 2013	Oregon Wolfe POPSEQ 2013	Morex Genome Release 2012
		No map location
Predicted Genes from contig_47654

Gene ID	# CDS Predicted	Max CDS Length	Probes in Cluster	FPKM by Treatment	FPKM by Replicate	Top Rice Hit
MLOC_63510	2	2817 bp	MLOC_63510.1	Available	Available	LOC_Os07g39020.1, FRAME:+1, EVALUE:0.0, 13107.m04041 protein OsSub53 - Putative Subtilisin homologue, expressed
CDS Structure of MLOC_63510

Contig Sequence (8948 bp)

>contig_47654 8948 assembly3_WGSMorex_rbca.fasta
GGTCTTTTCTGCTCCGGCCGAAAGACTAATTTTCTACTAGTGAATACTCCCTCCATTCCT
AAATACTCCTCCACGGTGGTTCCTTGCTGACGGAACAACACTAGGCGATGGGGCCGGCTA
GGGAACGGGGAACCGGTTCAGTTCAGTCCAGTGTTCAATCGTGTTGCAGTCTGACGCACG
CTGGAAGAAGGCAATGAGAAGCAACACCATGGTATATGGCGTTTGCAGCAAGGGCAGCAA
CGCCAAAACCCCTGGCGTTTTCATGTGGGGGCAGCAACACAAACGGGTTCGGTGTTTTCA
TGTGGAACAGCAACACAAACGGGTTCGGCATTTCTATGTGGAAAAGAAACGTCACGGTCT
TCGACGTTGTCAAAAAGGTCAGATCATGAAATAATTTCAAACAGAGTTCATTTTGTGTTA
TATTCCTCCGTCCCAAAATTCTTGACTTAGATTTATCTAAAAATGAATGTATCAAAATAC
TAAAACATGACTAGATACATTCATATCTAGAAAAATCTAAGACAAGAATTCGTGGACGGA
GGGAGTACTTCTTTGATAAGGTCAAAACAGTGATTTCGATCCGGTGCTGGCGGCCATCCC
CACGGGTCATGTGTTGAAAAATGTAAAACTGGCACATGAAATGGGAAAGACGAAAGAATA
TTGATCAGGCGCATGCATCAGGTGCCAGTGTGCGCATGGCCGGGGACTGTGCGAGTCCAT
GAGCAGCTGATGCCGGATGAACATGGTTTGGGAGCTTGTGCCTGCACGACGCACATGAAC
ACTTGCATGCTGTGCACAGACGGCTGAAAAGCACACACATGCATGCTCCTTCCGTTTCCT
CGTTTAAGCATGCAAACAAGGAGTTCGTACGTGGAGCTTGGACACACATGAATACTCGTT
TAAGCATGCAAACAAGGAGTTCCTACGTGGAGCTTGGACGCAACTAGCTTTTGCTTTGCT
GGCCCTTCCGTTTCCTCGGTTGATTTTGGCTAGAATCCAGAGCCACAGTGCAAGCTGATA
TCACCCGGTTCTTCCGGTGCTTCACCTGATTTTGGCCAGAATCCAGAGCCACAATGCATG
GCCGCGAGGCACCTAACGTGTTTCTTCAGCGAAATCGTCTGTAATGGCTTGCCAGCTCCC
ATGTGCTGTAACCTGACACGTTCACTACTTGCGGAGGGTTTCCAGTTTTCTTTGTACCAG
TACTAATTCCTCCGTTCCATAACATAAAAGCAGCGTTTTTTACACTTGTATAATGTTAAT
AACGGTCTTTAAAACGTTGTTTACACTAGTACTCCCTCCGTTCCTAAATATTTATTTATT
TTAGAGATTTTACTATGGACTACATACGGATGTACATAGACATAATTTAAAGTATAGATT
TATTTATTTTGCTTCGTATGTAGTCCATAGTTGAATCTCTAAAAAGATAAATATTTAAGA
ACGGAGGGAGTATAATGTTAATAACGGTCTTAATATTATGGGACCAAGGTAGTAGTAAAG
TTTTTGAATGTACCATGAGTTTCCCGGGCTTCCTTGGTAGGCCGTGAACTGCTGACAGCT
TCACATGCATGCAGCATGCCAAGCATGCGCACGCCGCACCACACAGCAAACCCATGCCGC
ACTGGCAAACTGCTCAACAGAGAGAGAGACCGGATTAGTAATCCATGATCACCTGCATGG
ACTTTCTGTGTGTGGCGTACGCTGCCAGGTTCCTCGGTTGGATCAGCAAGTGCATGTGCT
CACTGCAAGGAACAGTGTAGAAACTTGTGAGAATTGCTTCCGGTGTTTCTTTTTCGTTTT
GTTGTCATAGATATACTAGATTGAATTGATTTCTTAACCTCCGATTGCTGTGCTTGAATG
AGACAAACTAATTATGCATACAAGTTAGCTATAGATGCACCGGGCACGCCCCCTCTTGCC
AATTTTGGTTACTCCTGATTAGCTAGAGATGCACCGGACGCGCACTCCTCTGCATTTCGC
TAATTAGCTAGAGATGCACCTGACACGGACTCCTCTGCACTTTTCGGCTAATTAGCCAGA
GAACGCGAGTACGCCAAATCCGAAAAGAGCTAATGTAATCCCATGGAAGAAAATGATAAT
GCGTATGATCCACCGGAATTAATAGTAGAAACACAGGCACATTGAGGGCCGGAGGGAATT
TGTGGCACGCTGCGGGACAGGCGAATGTTGTGCCCTCGATCTGCGCCATGATAGGTGACA
ATGGGTGATGTATAGACAAAGCTCGATTTCCTTTTTTGTGTTATATCATGCGATATATCC
CTTTGTATCATAGTATTTGATATTGGAAAAAACTAATCTAGTTTTTCTCAACAACAAGTA
TTTAAGAAAAGAGGGAGTACATATTGTTGTGGGATCACGTACCTGTTTTGTGGGGATCTT
TAACCATGAAAAACGGAAAGATACGAACATATTCTTACCGAATGGATGAGCAAAAACGAT
TCAACATGACATTCTTTTGATGTTCATCTTAGTTCCTGCACGGAAAGAAAGATGACAACG
GGGGTGAAACCATAGCGCCACCAAAGGCCTTCCCTTCTCTGGTTCTCCTCGCCGCCTTGC
CACCGGCCCTTGCCGTGGTGGCGGCGGGCCAACTGTTGAAGGTCGCTGGGGCTGGTGATG
CATCGGGCTCGACCGCAGGACCTGCTTGGGCGGCGGCGGCCGTTGATGAGACGCGGCGAC
CAGGGCGGTGCCCTTGTGTCTAGGTGGCGGTGGTGATCTCTCACGACGTTGATTGTGGCG
CTACTGGTACGAGTAAGCAGTAGCGCCACAATTGTCCTTGGATTGCCGTCGGGAGATTGT
GGCGCAGGTTGCCATGACCCCTTCTGGCCATGGCCTCACACGAGCCAGAGCGGCGAGGCA
GGGGCGAGTGACGCGTCCGCGCAGGCGGCGTTGCGGTTGCCTTCTCCTCTGCAGTTCTGA
CTAGCGGCGTGGGGGCCTATTGGTTTTGCTTGATTAATGAATGCGGTCCTAGGGTTCTTC
TAGCACCAAGATGGTGTTCTGTTTGATGCCGACCCTCATTGATCTAGACGTTTGATGAGT
TCCGGAAGGCTCAACCGGAGATCTCTAGTGGGTGCTTAATGCATGTAGATTATTGGATCG
GAAGGGATTCGGTCGTGTGCGCCCCTAATTCAGCATGTGTGGCTTCAAGAGGGCGTGACG
CTAAACATCGTTGAATGTTGATATTATGGGACATGTTGGTATTTCAATTTTCATTTTGAA
TACATTAGCGGAGAATGTCATCGGGACTAAGGTATGAGGCCAAGTAATGGTAGATCAAGT
CTTCGACGCGATGAGGACTTTGCTTGGTGATTCGTTACTCGTAGAAGCGTCATCGGCAAG
TGGAGGCGGCAACGAAGGTGGACTACATAGTCTTAGCTAGCATTCAAGGTGAAAAATTAA
GGTCGGGTCTTAATTAGTTGTGCCTTGCACTGGCATTGTTAAATACATTATTTTGAAAGT
GTCGATATTCTCACTACTAGGGAAAAGTCTATAAGTAGAATGTTACTAATAGCGTGTGTT
AAGAACCAAACGCTACTAATAAGTACGAGTACTGTTTAGAAAAATTGGCGCTACTGATAC
GAGTAAGCAGTAGCGCTTGGTGAGCCTAAGCACGCTACTGCTAAGTGGGCCAAAGGTTAC
CCCTGGTTCGACATAAATTAGCAGCGCTCCCGTAAAAACAAACGCTACAGCTAATACCAT
ATCTGTAGCGCTTTCCTTGAAGGAGCGCTACATATATGTTTCTACGGTAAGCTGGTGGGC
TCCAAGTAGCAACAACGCGTGTCTACAGAAAGCGCTACTCCTACTTGCACTAGCAGTAGC
GCGTTGCCTGAAAAACACGCTATTGCTAATTTCTTACGGTTAAGCTGGTGGTCTCAAGTA
GCAGCAACGCGCTGTAAGAAATGGCGCTATTGCTAATTTACCTAGTAGTAGCGCTTTTCC
TAACCAGCGCTACTCCTATGGTCGTCAACGACCTTTTCCCCACCTCATCTTCTTCTCCCT
TCCTTCTTCCCCACCTTCTCTTCTTCTTCCTTCAATGCTCCCCCCTCCTAGTATTATCCC
TCTTGGCTTGGCTGTTTCTTCCACAAATGGTACAACTTCTATACCAGCCTCATCATCTCA
ATCACTTATGCTATAGTCTCGAGGGAAACATCTTGAATCATCAGATGGAATGAAATCAGG
AATGACCTCTATCTCAGCTTGTTTGCGAGATCTTGTAGTTGGTCCTGCTTTTTCAACTGT
CTTAAAAGTTTGAGGAAGTGTTGTCTCAGGTTCTGTGTCTGGGCCTCCACCTTTAGGCAC
ATCTCTTCCACCTCCGTGTCTCCTTCACAGTTAATCACATGATCTTCTGTCTATTTCCTC
ATCTGCTTTAGCTGATCAATAATTTATTTTTCCTCCTCTAAAGCTATGTTCTGCTCTTCT
GGTTTGTACTCACACCAGTGGAAATCAATAAATCCTTCATCGTCCGAGGGGCCATAGTAT
TCCCGAGCTTTACCCTTGGCCTTCTTTAAAATTCATACTCTCATGTGTGTTCAGAAAATC
AATATGTTCACCTGGTTGTGCAGTACATATAGGCACAACATACAACTCCTCACTGCTAGC
TATTTCAAAAGGAAACAATACCCCAGCCTCATATACACTGATGATGTTGGATTGCCTAAC
CTGGTCTATTGGTATGTGGGCCTCACCTGAGTTTTCTATTTTCAAATCTCCAAGATTAGG
CTCAGCAGCCTTTATGACGGTGATGTTCAGCAACTTCTCAAGAGCATACTCGTCAAGCAT
CTCCTCTACAACATCTTCACTGTCTATGACCTGCAATCCTGTTGACTCCTGTCCCTCATT
TCACATAAAACATGTAGTCGGCTTTAATATATCCCTCCTCAGTCACCGTTAGTGCTAACA
AGTTTATGAATGTTATTTCTGAAAGAGAAATGGTCCTCTCCAAGTTGTCTTTGCCTTGAA
AATAAAACCTAATTTCTCATATCTCATCATTGAAACTACAAAATATATAAATAGCTTCAC
AATTTACAATCCCTGTCTACTACACAATGAGAAGAAAAGAGCTGCTGTCACAATAGATCA
CTAAATCGCTATACCTAAATAATATAAAAAAGAGATACGGTCGCCCATACTAATCCCTAA
CACTAAATACATATCAACCAAATAATAACTATACCTAAATCAAAAAAAAAGAAAAATCTA
AAATGCAACAATTAACGAGAGGAGTAGAAGCACTTACCAAATGCTGCGGAAACCTGAAGC
CCACTCATGCCCGTGGCCGATGTCGGAAGCCCTTATTTGGCGGGCCAAGGTCGCCGCCGC
ACGCCGCTCGTTATCAAACTCCGGCGACGAAGGGGGGAGGGTGGGGCAATGGGCCCGCTC
CGGCGAAGCAGCTGGCTGCGTCGACAAGCTACTGCTGCCGAGCGAGTTGTCCACCTCCGA
GAAGCCATCACCATCAGCTCCTGTCACTCCTCCGCCACCTGCTGTATCATCCTCACCGCT
CTCTTTTACCAGCCTGGGGAGAAGGAGAGAATCGGTAGGTGGACAGAGGGAAGGAGGCGT
TTGTGACCTAGCACCGCAGCTAACGACTGTCACTAGCTTGCCGTTACACTAGTCCAGCGT
GGCACCCGACAGGTGGGTTCACTTCGCCGGAAATCGTGTTAAACGGCTCTAAATTGGTCA
TTTTGTGTTTATTGGAAAAAAATACCGCAAATGTGGTGGATTTATGGGACGAGCAAGAAA
TGTAGTGGCAATTCTGCTCGACGCGTGCGAATGTGGTGGTTTTTTTTAATTCACTCGTTT
TAATGAGGAGAAATTGTTATGATTCTTTTCGAGTGAATTATGTCATTGGGGACACGGGCC
GGCTTATATATAGCCGGCTCTAGATCTGTCTTCTCCCCTCAGCAGAGCACGGTTGTTCCC
AATGGCTTTGCCCTCCATACTCATCGTGCTTGTGTGCCTGTTTCACCCCGTGCACTCCAG
TGCATTCCCAAATCACCACCATGCCCCATCACACTCAACCTACATCGTCCTAGTTGATCG
CATCTCAAAGCCGACGTTGTTCGTAACCGTGGATCAGTGGTACACTTCGCTCGTCGCCAA
CACGAAATCCCCTCCTTCGACTGCGAGCATCGTGCATACATACAGCACGGTGCTGCAGGG
ATTTGCAGTTGGCCTCACGGATGCGGAGGCCCGGCACATGTCCGAGCTTGCCGGCGTCTC
CGGCGTTTTCAAGGAGAGGGTGTACCGCACCCACACGACGAGGACGTCGACCTTCCTCGG
CCTCGATCCTCTTCACGGAGCTTGGCCGGAGTCCGACTTCGGCGACGGCGTCATCATCGG
CTTCGTCGACACAGGAGTATGGCCGGAGCACCGCAGCTTCGACGACGCCGGGCTTGCTCC
TGTCCGCTCGTCTTGGAAAGGCGGCTGCGTGGAGAGCAACGATTTCAATGCGAGCGTGTG
CAACAACAAGCTCGTCGGAGCCAAGGCATTCATTGCGGTGGACGGCGACATCACCGCGCG
GGACACCTACGGCCATGGCACGCACGTGTCGTCCACGGCCGCCGGCTCTGCGGTACGTGG
AGCCAATTACAAAAGCTTCGCACGCGGCAACGCCATGGGCATGGCGCCCAAGGCAAGGAT
CGCGATGTACAAGGCCTGCGACTTCATGTGCAGCGACTCTGCTATTGTCGCCGCGGTCGA
CGCCGCGGTCACCGACGGCGTGGACATACTGTCCATGTCGTTGGGAGACTCGGACGCCCC
GCCTCCTTTCTACGAGGATGTGGTGGCGCTCGCCACCTTCGGGGCGGAGCGCCATGGCGT
CTTCGTCGTGGTCTCTGCCGGCAACTCCGGCCCGGAGCCGTCCACGGTCAGGAACCTGGC
GCCGTGGATGACCACTGTCGGCGCCACCACCACCGACCGTGTCTTCCCGGCTAAGCTCCG
GCTCGGCAGCGGGGTGGTGCTCACCGGGCAGTCCTTGTACGACCTGCCCGTCAAGGCGGA
AGGGGAGAGTTTCAAACTGGTGAACAGCACCTGCACCTCCGACTCCCTCATCCCGGACCT
GATAATGGGTCGTCTGGTGGTCTGCCTTTCCCTTGACGGTATCTCCGGCGACGCGCTCAG
AGGCGGCGCAGCTGGGCTCGTCACCATAGACCCTAAGAGCAGGGCATGGGACAGCGCCAA
CGCGGCGCACTACACATTCCCTGCCCTCTTCCTCGGCCGCGCGGCGAGGGACGTGCTGAT
CAACTACCTGTCGTCGACTGCCTACCCCGTCGGTCGGCTCATCTTCGAATGCGCGACGGT
GATCGGGAAGAACAGGGCACCCAAGGTCGTGGGATTCTCCTCGCGCGGCCCGAGCAGCGC
GGCCGTCGAGCTCCTGAAGCCCGACGTGGTGGCGCCGGGGCTAAACGTCCTTGCAGCGTG
GACAGGTGATCGTTCAGGTGAGAAAGCGCACGATTTCAACATTATATCGGGCACTTCCAT
GGCATGCCCGCACGTCGCAGGCGTCGCGGCTCTGCTCAAGAAGAAACACCCCGACTGGAC
GCCGGCCATGATAAGGTCGGCGTTGATGACCACGGCTAAGACCGTCGACAACACCGGGGC
CCCCATTGTCGACGACGGAGCCGACGACGCCAGCGCCGCGACGCCGCTCGTGGCAGGGGC
CGGGATGGTCCTTCCGCAGAGCGCGATGCATCCGGGCCTGGTGTACGACGCCGGCACGCA
GGAGTACGTCGACTTTCTCTGCACCCTCAACTACACGGCCGAGCAGATGCGTCGGTTCGT
TCCTGAACGGACGACCAACTGCACGTCGACTCTGCACCTGCACGGCGGCGTGAGCAACCT
CAACTACCCTTCTCTGGTGGTGCTCTTCGGCAGCCGCACACGCATCCGCACGCTGACGCG
GACGGTGACCAAGGTGTCCGAGCAGCCATCCGAGACATACAAGGTGTCTGTCACGGCGCC
GGAGGGCGTCAAGGTAACCGTGACGCCGGAGACTCTGGTGTTCAAGCAGCAGAGGGGGAA
GATGAGCTATAGAGTCGACTGCCTCAGCGACGTGCTGAAGCCGGCCGGGGCATGGGAATT
CGGTTCCATCGCATGGAAAAGCGTTCACCACAAGGTGACCAGCCCCATCGCCTTCACCTG
GGGCAACTGATCAATGTCCTAGTAGATCCATTCTCTTAGTAGAACCGAAATTTCCATGCA
TGCCACTGGAACCGTTTGTTAATGTATGCTGATGAGCGAGGGGAACTTGGATTTCGATAT
GATCCATTGATTTGCTTGTTTACCATGTTCCAGATCCTTACTCTTTATGCTCTAATTTCG
AGGTATAGTCGCGCTCGCCCGTCCGCCGTAGTCAGCGCAGCGTCCTTGTGCGTGCCCCGT
CAGTTGTCCCGCGCTTCGCGCACGCGGCCGCGGCCGGTGGAGGGGTCCGTCTAAGAGCAT
CTCCAAGAGCATACTCATATTTTAGGTAGTTAAAACCATTATGGGTAGAGGAGAGAGAAG
GTTTGGGTATTCAATTTTTTTTTCTTTTCAAGCTTACCCATATTTGAATACCCAAAAACT
TGATAGCCCATTCTTTGTGCTTCTAGTTCTATTTGTGCAAATGCAATCAAATCACAAATA
CGATCAATTCAAACGTGATAAATTAAAATTCTTAAATTGTCAAACAAATATTGCATATTA
CAACACAATGTTCATCAAATCAAACACAAATGTTAAACGAAACCGAATTAGCAATCGAAA
TACGAACTCAAGTATCTAGAAAAATAGATAGCACATCAAAATCTAAATAGCCAACTACCA
AAACATTTCTATAGATGTTTGAAACACAAAATAAAAAAGGAAAAAAAAAATAAAAAACGA
AGAAATTACCTTGCAAGCAAACCGACGAACACCTTGCGGGCGGCGGCGGCGATTTGCGCC
GGCGAGGG