Contig Data
morexGenes
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Map Locations of contig_47620 (4329 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012




Predicted Genes from contig_47620

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_63474 1 660 bp AK376183 Available Available None





CDS Structure of MLOC_63474






Contig Sequence (4329 bp)

>contig_47620 4329 assembly3_WGSMorex_rbca.fasta
GGCTTTGTTGTTGTTGTTGTTGTATAGCCGTTGAGTACATGACAATCCAATGTTGCTAAT
ATGGATAGCATGATGCAACGATCTATGAGTTGCTTTCAGGCATGTTCTATCTCGCTCGGG
TATGCTATACTGAAACTTGACTGGACGATAAGGTAAACCTAAAGTGTCAAGTCCTAATTT
TATCACATCCTACCAAAGTACCAATGACTGGATCAACTCATGAAGATGCAGTAGTCCTGT
TTCCTACGTAATTCGTCTGATATTTAACCGAAAACTAATTCAAGTAACATCAATGAGACA
GCAGCTGCACCATTTGGAGCTTGGCAGCACACAAGGTACATCATAAATAAACCACCCAAC
TCAGCGATAATATCAATTGGATAGAAGATTAAGCTTTCACAGACACATGTGGTAGCATGT
GTTCATTAATTTTCAACTCGTACAAACTTGACCACAACAAAAGGAAATCAAATACCTCAA
TCGGATTGAGAGGCAGCAGTTCATAACCGTTATCCGTTTCAAATTTCAGTCCTTCCTCTT
GTAGCTTTGATAGCACAACAGGATAGTTTTCAGATGTAGTAACTATCTTGTAAAACCTGG
AAGGAAAGAGAGCAATTGTAAGAGCTGTATGTACTCTGAAGAGACAGCTATGGCTAATTC
CTAAATGTAGTGAATTGGAAACAAAAGCACCAGGAATATCACATGCAGGTCTCTGACTTT
AAGCATAACCTCTCTGCATGCATGCAGTATTTTATGGAAGCGAGAACAGCACAATATCTA
ACTTGTGTTAATTTACCACCTGTAAGATACTATGAAAATGAAGATCAAATCCACTGGATC
GGAGCGTAACATTTCTAGTTGAAATCAGTGGGGTACCTCTCTAGAACCTCCTCTTCAGAG
TCATCTTCATCATCAAAATTTGGTTCAATAACATCATCGGCACCAGCATCCAAAGCAACA
GACAGTAGTTGGTCCTTATCGGCATCTGTAACTTTTATGTTAACCACTCGAGCTTGTCTG
AATCTGAATGTAACAGACCCAGGATCAGCCAATTTTGCTCCACAGTCTTTTACAACATTT
CTAATATCCGCAATAGATCTTGTAATTTTGTCTGTAAGGACCTCAACGACCATACCTACT
CCACCAAAACCATAGACCTGTTGAAATGTTTCAGGCACTTAAAACTTTCACAAGATACAA
AATATGACCTTCAAACTTATTAACTCCTGAACACAATTTACGTCATATCTTGTAATACTA
TTGCCTACCAACCTCATATATTCATTTATTTGGAAAGAAAACTGTAGGAGTGACTCCTAC
ATACAATTAGGGACCCAAATTTGCGTCCATGAGGATTTAAACCTAGGTGGTAGGGTTGTA
CATCCATTTCCCCAACCAGATGAGATAGCCACACTTTCTACCAATATCATATTACTGCCA
AATGAGAACCTGGTAAGGTCCACAGTAAACTAGTGATAGAGAATTCTACCTCATAAATTT
TTTCTGTGTAAGTATCCTGACCCTTTTCTGAAGCTCTTTTGATATTACGCTCAACAACTT
CCTTGGGGACATCAAGCTCTCTTACTTTCTCTAGTAGCGCTGCTAAAGCTGTGTTGGATG
AAGGACTTGGGCCACCCTTCTTGATGCTGCATGATATCCATATGAATATATAAGGAGCTG
AAATAATTAAAATATTTGAACTAAAACCACGACAAGAATTATGGAATGGAGGGAATATAT
TAGAGTAAAATGCATCATAGGTCCTATAACTATTCCAAGTGTGTCACTTTAGCCCTACAA
CTTTCAAATTGCACATTTGGGTCCCAAAACTATTTCGAGTCGTTCACTGCAGGTCCTATG
GTTGCCCGAGCAGCGTTGACTGCCCGACATGTCGTCTGGACCGGTGCCACATCGACCAGA
GGGGCCTACCAGGCTAAGCAGTGAAGCACATATTTGCAGGAAAGCCCTTAGAATCTCAGC
TTGTCTCATTCTCAGACCCTCCATCTCTCTTCCACGATCGAAGCTCTCGGAGGAGTGATA
TGGTCGCGACCGGCGGCGGACGCGCTTGATGCCCGGCGATTGGAGGCGCAGGACGGGAGT
CAGGGATGCTAATCCGACCGCGGGGCTGGTCCGGTGGCTCCATCGCAGCGGCTTCCCAAC
ACCCCTCCTCCGGAGTACGGTAAGAACCATAACCCCAATCCCTCTCTTTAGCTTAGAGAT
TTCGACAGAGTAGCATGATTTGGGCATTATAGCTTAGATATTGTGTCGATTCAGTCTGAA
TGTACGTACTGAAATCTATTTCAAAAGAGCTACTGCTGTATGTATGGTGATTTGGGCATC
TTCCTGTAAGTATGGCGATTTGGGCATCTTCCCGTGCGTATGGCGATTTGGGCATCATTG
CTCGTACTGTACATAATCCCTGCTGTAACTGAAGCCTTATTATGTACAGTGGTCTCTTTT
TTCGCATTATAAGCTCGTCCTGTACACCTATAGTAGCATTTGAAATTGTACTGCTGATGT
ATATATGTACTAGTGGTGATGCAAAAGAAAAAGAATCATATCAAAGAATATAATTAACTG
AGGTGCTTAATGCTCTCAGTAGAGATTAATCATGGTGGGTTTTTTCTCGGCTTTGGAACA
AACAAGAAATACATGGATTGCAAAACATATTTCTTTGATCATTGTGAGGTTGAAACCTGG
TCGCCACTGTGGATTAAAGATTTTGTGCAGCAGCTTGGTTATGATCCAAGTAAAGTGCAG
TGTCTCTGGTTACTTCGTGGCATGAATTTGGATAATGGACTGAGAATTATTGATAGAGAT
GCAGATTGTCTTAGTATGACTGCTATTGTGCTAAAGTTCAAGCATTTCAGGTTGTACATG
GATCATGGTGATGTTTATAGTGAGCTGAATATGGATGACATATGCATAATTGACTCACCT
ACAATGCCTGATATCATGAGTCCTGTGAAGCCACAAGAAAGAGGTGCAAAGAGCTATGTT
AGGAGTAGTCCTAGGATCAAGAGCAAGGCACAAAAAGGTAGACTAAATATGTCCACTAGT
CAAGAGAACATTAGACAGAGACCCAAAGGGAGAAATATAGAGCAAGTGCAGGAAAACAAT
GACAGCGATAGTGGTAGTGATAGTAATTGTAGTTATGAAGATTGGGCTGACTCAGACAAT
GACTTTGACAATGGTGATGATAATCTGTTTGAGGAGTGGGTTGATGACTTCAATAAGGAT
GTCAGAGCAAAGAAAAATAAAAGCAGTACAGTACAAGAGGGATAGTGACTAACTGACTAT
GACACTGATGAGCTAGAACTGCCAGCTTCAGAAAATGAGGAAAATGAATCAGAACATGAG
GTTGTTATGTAAAAAGGAAAGAAGAAGGTGAAGCTCAGGTCTTTCAAGCCAGACGACATG
AAAGCACCAACATTCAAATTGGGTATGAAGTTCCCTACCGCAGCTGATCTTAGAAGGGCA
ATTCGAGAGTACGCTATTCAGAATAGAGTTGCAATCAAGTATGCAAAGAATGATAAACAA
AGAATTAGGGCACACTGCTCCAATGACTGTCCATGGTATTTATTCGCGGCACCTGACAGC
AAAACCACAAGTTTTGTGGTGAAAACTTATGTGGGGGATCACATCTGCAGTAAAGAATGG
GAGGTTCATGGATTCACATCAAGATATCTAGCAGGCAAGTATTTGGAGAACTTCAGGGCA
GACAAAAAGATGACATTGATGAATTTTGCAAGATTGGTGCAGAAGGACTACGACATGATC
CCTACAAGGAGCAAACTAGCAAGACCAAGAAGGATAGCAATAAAGCAGATTCATGGAGAT
GAAGAGAAACAATGCTCGTTGGGACTATGCACAAGATATCAGAATGTCCAACCCTGGGAG
TAGCATGTTTATCAAACTCAAAGATGGCAGATTCTACCAATGTTACATGTCATTAGATGC
TTGTAAAAGAGGCTTTTTAGCTGGATGCAGGCCTGTTATTTGTGTTGATGGGTGCCATCT
TAAAACAAAATAAGGCAGACAATTGTTGACTGCTGTAGGGATTGATCCAAACAAATTTAT
TTTCCCCATTACTATGGCTGTAGTCAAAGTGGAGGACACACCAACATGGAAGTGGTTTCT
ACAGACTTTGAAAGATGATCTATGTTAGGAATATGCAACTTGTATNNNNNNNNNNNNNNN
NGCCAGTATATATACATGTACAGGTGATGGACTATATGCAGGAAACCCCTTATATATCGG
GATAAATACAAAAGGGTACATGACTTATATTATAACTCTAACACCACCCCTCAAACTCAT
GGTGGATGA