Contig Data
morexGenes
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Map Locations of contig_475124 (6644 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location No map location




Predicted Genes from contig_475124

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_63360 7 2838 bp None Available Available None
MLOC_63359 5 2233 bp None Available Available None
MLOC_63358 2 1100 bp MLOC_63358.2 Available Available LOC_Os05g28960.1, FRAME:+3, EVALUE:7e-81, 13105.m02985 protein acyltransferase, putative, expressed





CDS Structure of MLOC_63360






CDS Structure of MLOC_63359






CDS Structure of MLOC_63358






Contig Sequence (6644 bp)

>contig_475124 6644 assembly3_WGSMorex_rbca.fasta
CCCCCCCCCCCTTGGTTGCTCGTCGCTCTCCGCCGCGTGGATGGCTAACTTCCATGCACC
CCTGTCCATGNCTAGTTCTTTGGTGATATTCCAGTCCTTCACAGATCTCTCTTTATGGAC
TCCTTATTTTGTTTGTTCTGCGGTGTGGATTCTTTTCAACATGGCATTATTTTATTAATA
GTTAGGGTTCAACATTTAATGTCTTGTACCCCCTCCGTGTCATATTAATTGACGATCAAA
CGGATGTACCTATAGTGCTAGATTCATTTGTTTGAGCGTCAATTAATATGGGACGGAGGG
AGTAGCTTTCTTCGCTTTTGACTTAACTGTTCATACTATGTGTAGGTGCTGTAACTGAAA
GGCTCCATGAGGTTTCTCAAGACGAGAATTCCTCTATGATGTTACTCTTTCCTGGTTAGT
GTACACTCGTTTTTATGTATAACGGACATGGATTTTTCAAACATTGTTCCACGTGGACCC
ATTATGAATAGTAAATAGGAAAAAGTACTACCTAGAAAAAAACTGATTTTTATTGGTAAC
ATATATGGTTGAGTATTCCACTCAAGTGTGAGGTTTCGCGAAGAGTTGACATCTCTGGTA
TTTTAGAATCATATTCACCTTTGTATTTTTGAATCCTTTATTATGTAATCATCCTATGTC
TCGTCTTAACTTAGACTATTTGAGTATATTATGATGAAAATATGCTTGATTACGAGCTAT
AAGTTCTTTCCCATTGCTTCGGTGTGCTCTTTCAGTTTTCAACCTCATTTTTGTCATGTT
TGTAGCTCTAAAAATTATGTCTTTCCTTTGTTTATAGTCCTGTTTCTTCTTCTTTTCTCA
GAGGTTACTACTACGAATAGGGATGTTTTCAGCCTCAACTATGTTATGTTTGTAGTTTTA
AAAACATGTCTTTTGTTGTTTATAGTCCCGTTTTTCATCTTTTGTCAGAGGGTACTACTA
CGAATGGGGATTACCTTCTCCCATTTAAGACAGGAGCCTTTCTTGCAAGGGCACCATTGC
AACCTGTAATTTTGAGATATCCTTACAGGAGATTTAGTCCAGCCTGGGACTCCATGGATG
GGGTAAGAATCAATTACAGACTAGCATTTAATTTAATGGTAGTATAGGACTTGCAAGTAG
GCGCAGGTATGCATGTGCAATATGTTGGAACCTTCTATGTGGATTTTGTATGGGTTACTA
ATAATCTCAAAAAGAAAGTGTAGCACTTTGTCCCATGTAGGATCTTGCAGTGATTACTTT
TTCTCAAACTTCTCACATCCTTATTTTCCATGTTCAGCAACGTATCATCTTTCGTGTTGA
AACAAGGCTGCTACTTTCTTACTCTAAACTTTCTCTAGTTTGATAAATTGATACATCAAC
ACTTCTAGAAATATATTCTTACTTCGTACTGTGCATGAAATAGCAATGGTTATTTTTATT
TTTATTTTGGTACGAAACAACCCTACAATTAAATATGGTTACTTTACTTTACTTCCCAGA
AGTATGTGGCATGTGAACTGGTAAACTCTGTTTCCGGTATATTTTTTGTGGTGCGTTTAT
TTATATCTTCTGTACTAACATACTGTATAATATAGTCTCTCGTCTTGATTAGTTGAATTC
TGAAACAAAATTTACATTTTGTCTCATCACAACCTGCAGGCACGTCATGTGTTTTTGCTC
CTCTGTCAGTTTGCAAACTACATGGAGGTGGTTCGCTTGCCTGTATACTATCCTTCTGAG
CAAGAAAAGCAGGATCCTACAGTCTATGCCAGCAACGTCAGAAAATTGCTTGCGACTGAG
GTATTCTTCATATTCCCTTGGCTTGAACATGCTTTTATGTTCATTTAATAATCTACCATG
GTGTTACCATAAAACAAACCTTTTCCTGCAGGGTAATTTAGTTCTTTCTAATCTTGGGCT
GGCTGAAAAGCGTGTGTATCATGCAGCACTTAATGGTAATAGTCCTCGTGCTCTGCATCA
GAAAGATGATTGAAAGCCCTTGCATCACTCTCTGTACACTATCTGTTGAGATGATTGTAA
CAATGTATGCCAACTTTAGCTGATCATGTGATTCATGGTTTCTCTGTTTGAGGCGTATGC
TGATTGATGAATACATTATACCTATTTTGAGATGAATTCCCTCGTTATATTACATTGTAT
AGAAACCATTAAACATTATAGTTCAATAATCATGTCTGGCATAACTGTTGTGTTTGGTCA
ATCACAGTTTGCATTTTCGCTTCTTGGTTTCCCTGTTTTTGGCCCTTTCAAGAGCCACCA
TTTGCTTCACATAACTGAATCATCAATTATATTTTTTCGGGGGAACTGAATCATCTACTT
GGTCTTCCCTGCAGGACTGTTGTGTCAAAGCTAATTTGGATACACATGATGATAGTTTTA
CTTCTCGTCTTTGTACATTGTGAATTAAATTTGGTGTTTGTTCTTTCTCAGTGAGGTCAG
ACACCATGTACATGTGTGTGCCTTTGAAACAAACCTGAGTTAGGTCTTGGGGCCAGAAGA
AATAGAGATAGACGGGTAATAGTTAAAAACTAACTTCTCTTTATTTGATTTGGCATGTGA
TTTGCTTGACATCCACTAATGTGGAGTCCTGATTGGACTTCTACCGGCGTGTGTCAAATT
TTGTCCTAATCGAACTTCTGCGTAGCTCAGTTTGTTATTCTGTATATATATAGAGAGATA
GAAATATAAAACACGCTAAGCTAGCCTGGCTGTGGTGATCTCCAAGTTCTGGTGGTAATT
CTTTCATTTGTTTTTCTGGTGGTAATTCTTTCATTTGTTGACACATGTATATGTATTTTT
TTGTTAGCGGTGGTGTTCTTGCCGGTTTTCTCTCCTGGTCGTGTGCCCAGGCCATCATCT
ATCCGTGATATGTATCATGCTTGGCATTTTGGAGTACTAGATAACCTGTTGCGCCAAATG
GTGCAGAGATCCATATATAAACCGTGTGCGCATTGAAAATATTTGCATTTTTTCAATAAT
TTTATTCTTGAGCAAACACTTTAAGATGAAAATTGTTTTACCTCGTTAGTACAAGTAGGT
TTTAACTATATACTTGAGCGTGCATATTTTGTTATCTTATTCGGGTAACATAGAGTCAAA
TGGCACAAGGTTGGCATGTCTGTCATTTAATGAAATGAGCACTGTCATTGGTTCCGCACT
AAGAATACTCATAAACTATCCCAACCTGACTGGATATATATAGTTGGAGGGGAAAAACAC
AAACTATAATATACTGATACAGCTGGATATCAAGATTCTGAGGACAAAAATATCTACACT
AAATTACCCAAAAAACAGTTTGAATCATGAATATGCAAAGAACATAGTTAACACAACCTT
CCATGCAAACAGTAATCATTAATACTTTTAGAACCCGCAACACAATATAACGCATCAGCT
AGTAAGAAAGGAGGGAATAAATCTTGATCGACAGATCAATAGGGCACCAGCTTTAGATAT
TGTACAAACTGTATAAAACAAAAAAGGAAATTGGTCAGAGTATAGTCTACCCCAACGTGA
CTGGATATATATACAGTTGGATATCAATTTTCCTAGGAGAAGTGTTTAAAATAAAATAAG
AATCATGGGCCATTCAAAAACAAATTCATATAGATATATATAAACCCAACGAAGAGTTCG
AATCATGAATACACAAAGCACATCGATGACATGACTCACCATGCAAACAATCATCATAAA
TACCTTTGAAACCCAAACCCATATCTCAACCTAAAGATGATAAAGGCAAACATGTATACT
AAATAGAATTTGAAAACATATCAGGGAAGATAATTTCCTCACACAACCATGCCTGTCTAT
GCAACTATCTAAATATCTTTACTAAACAACATAGATAGTCTTTTTAGGCTAATTGTTTGT
CAGTAACTATGACAAACAATTAGTCTAGAAAGACTATTTATGCTGGAGCAAGTTGATCAC
AAAACTCCATACCAAGACATCTCCAGATTTCCCCCCAAAATGAGAGTTCAGCAAGCTACC
ACCTTCAACCTCCTAACTGATTCGAGATCAACATCTATTAGTTTTGAGAGACCTAAAAAT
AAAAACATCAGGCACATTTGAATAAACATTCAACAGAATGAGTGATGTATATGGAAAAAC
TGCAAAATGAAATTCAGTAAACAGAAATACTGCTATAGTTCATGACTGGATTCACTCTCT
TTCAACAAAAAAGTAGGAAAGTGTAACCACCTTAAGTAAAAAAATTAGATGAGCATGCTA
CCATGCCCTTGCTCAAGTTCAAACTACATTTGAACAAAAACTGGGTCGCCAGCCTAGATC
GTTTTTCCAGGTGGAAACTGCCATCATGGAGAAATTCTAGAAAATATATAGAGAACAAAT
AGACCATAGAAGAGTTCAAATAGTATTTTGCAATAGCTAACTATGCAACTTTCCTCCACA
AATATGAGATAATTTAAATGTCAGGATGATGCTTGCTTTCCCCTTATTTTCAGTTGCATT
GCAATAACTCAGCGGCAAAGAGTACATCACTGTGGTTTAGTTTAACAATCTGATTCAATT
GTAGAATGTGTAGCCTATTCTCTTATATATGTCAGCAAGCTCTTTTTTTTGTACCCAAGT
CAAAACTAAGCATAAATGCCTACATTATTGGTAGCATCATGCAAAAACATATTAAGAAAT
AGAGCTTTTGGACCAGTGAATCACACTGGTATTAATCTCATTGGTGAGAACCGTGCAAGA
TTAAGAAATTATCTAAGCCTATAAGTTTTTTTGTGAATGATGCAAGACTTGTGTTCTTTA
TTGCAAGAATCAACCTTAGCATGCTGTTGTGTAGAGGTACTGCTAGCAGAAGATGCCACA
GCCAATAGAAATTGGCTGTAGATTTCTTCTATTCATGCTGCTCCATCCTGCAGTAATTAT
TTAGAACAACAAATAAGATGATTGTTAGTTTAGAGAAGGCACACTCGTTCCATAAAAAAA
GAGAAGGCCACACTAAAGAAGCACGCGGCTCGAAAGAATAAGCTAAACATTGAGATGCTA
CTGATAAATATAACTGAATTTCCATCAGCAAAAAGAAAACATGCATGTAGCTCAAAAGAA
TAAGCATGTAGCTTCCCCGCAAAAAAAAGAATAAGCATTGAGCTAGAAAGAAAGGAAGCA
AACCTTGAGTAGCAGAACCATCATGAGATCCTAAAACCTGCTATATAAACGGAGATGAAG
CAGTCGGAGCACAAGCATGATGTGGAACGGTGCATGGACATGTAAACGTATAGTAATCCA
CAGATAAAAGCAGAAGAACGGTCCATTTACCAGACCTGGAAAGGAGAAGCAGGCTAGGAA
AGAAGGAAAGAAAGATTATAAGACCAAGGATGACCAACAAGCAAAATGAATTGAAAGAAA
AAAAAAAGGTTAGCAAATACACATTTCATCAAACATCTTGCACGCAAGAAAATGGAGCGG
GGTGTCACCTCAATGAATCGCCAAAGGCAGAACGGTGCGATGGTGGAGAGAGGATATAAT
CAACCTACGCATGAAGGAGACAAAAAGAAGAACACCAAATCAGCAGGGTGTAGGAAAACG
AAGGAGACAAAAAGAAGAACACGAAATCAGCAGGGCGTAGGAAACATAAGGGTAAACAAC
AAGGTCTACAAAGGAGAACGAATCTCAACCAATAGTACCATCTAGAGTATGGACACTATT
GCAGCAGACAAGAGCACACCACCAGTGAAGAAGGAGAGGCAATCCAAATGAAGAGAGAGC
GCAACAGCGAGGAGGAGAAAGAGAGCAACCCGATCATATGGAGAGCGCCGCTGAACTCGT
TGCTCGTTAGCACGTCGTGCCGGCCTCCTAACCCTTCCCTGCTCACCCGCCCCGACGTGA
AGTACCCACTGATGGCTGGATCACATGGTTAGCGGTAGTAAGAGGAGGAGATTGGGGTAT
ACCTTCTCCTTGGCTCGATGTGTCCGCTTGTCATGCCCTGATTATAGAGGAGTAGAAACA
GGGGAAATTCTGCTCGAGCAAGCCACTTTACTCACTGAATTAAGGCCGGAGGTCAAGTTA
TATTACAAAGTCCAGCCAGAAACACTGGCGGCGTAGAGGGGGAAACCCTAAAAAAGATAA
GATAGTCCACTCGAGCTCGGATCATGGCTTTTATAGCCTTAAAAAGAGAAGAGGGACGGC
AAAGCTAGAGAAGAAGAAAAAGAAAAGGTGATCGTGCCGGAAGAGCGACNNGGACGCTCG
GGGGTACTATCACCGCAAGATCAAGGATCGACGGCTCCCGCGGCTCCACTTAAAGTGAAT
CGGTACGATGGCTTGTCCCGCGTTGGATCCTTGATGGACGGCTTCGGTTGCTTCCCGCCA
TCTTCACGTTCGAATCAGACTTGATCAACACCAGCATACCTTGGGTCCTGACAGTTCCCC
CCGAGTAACACCAGACCTGTCCTCAGGGCTGGAATGCTGGAAAGACTTTCTCTATGAAGG
AGACATCCTCCCATGTAGCATCTTTCTCCTCCCAGTTAGTCCATTTGATCAGCCACCTAA
CCACTGGAATCTGAATATCACCTTGCACTCTTGGGATCAGTTTTCTCTCCAAGAGTTTCT
CAGGTTTTAACAGGATTGTTCCATCAGTGTGTAGTAGTGGCAGG