Contig Data
morexGenes
Links



Map Locations of contig_47485 (4946 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map locationNo map location




Predicted Genes from contig_47485

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_63316 2 2110 bp AK250944.1 Available Available None





CDS Structure of MLOC_63316






Contig Sequence (4946 bp)

>contig_47485 4946 assembly3_WGSMorex_rbca.fasta
CCTACCTCCTTCCCCTTCCTCATGCTCACTTGAGGTGGCATGGTCGCACCGATGCGCGAC
AGCAGCCATGTCCGTCGCTGTGGCACCCATCCACGGCTCCCCGACGCCCTACAAGACCCC
CGTGGCCGCCCTAGAACCCTATCCCCCTCTCTTGCTTCCCCCTCGCGTCATTGCTCCTCC
CCACGCACACGCTGGCGCCGTCGTCGCCATGGCTAGGCTAGCCCCCGCGGCCACCGTGTC
CCCCGACGCCTAGGACCGTGAGAGAAGCTCTGCCAGCCTCGCTTTCTTCCTCCTCGCCAA
CCAGAACGCACACGGAGCCCCTGTATTGCCGTCCCCGATGTCTTCTTCCCATACATGTCA
AATGAACTCCGGCGATGAATCCAGCGTCATCAGGCCTCTCCTGAGCCCATTTAGCTCACC
TACACGAGCGCTATAAGCTCCTTTTCCTCTCTCCGCTCTCTCTGAGCTTGCTCTATACCA
TAACTTCCTTCTCTCCCGTGACCGACGCTCGGCTCCGCTCGAGCTCGTTGCTACCGGGCC
TCCGATGACCATTTGGTCAAGCACTCGCCACCGTTAGACTCCCCGCATCGTGTAGGCCCT
CCCTCGCCGCTCAGCTTTGATCCTAGCACGTCGTAGCGTCGTTCCTGAAGAGCTCCGCCT
CCGGCCGCCGCTCCACCTCGACACTGGCAATGCTATCGCACTCCCTCGCACCTCCTGATG
GTCGTAACGAACCCACGAACGTCCGAGCGTTCAAACCTGACTAGCTCGGTGCCTTTTGGT
GCCATATGGCCATTTTCTAGCGAGGCTCGAGGCCTTCCGCTGCGTTTCTGGTCATCGGCG
GCCAGTTGCCAACCGCTGCCGACGTGGCGAGGCTGGGCCACCTCCCGTGTCACTGCATGC
GGGTCCCCTATCTCAAGTGGGTAGGGTTAACCCTGGTCAGCTGCTAACTGGGCACCCCAA
GTGGCTGACGAGTGGGCCACACACCCCGGGCCATTAACCCTAATTAAAATAGCTAAATTA
GTTAAATTAATTACTTTGATTTAGTTAGACACTCACATGTGAGCCGAGGCCCTGATCTAG
TTAATTAGATTAATATAAACCCTCTGAAAACCCTGTGTCTATGACAGGGGCCCTAGTGGT
CAGGTTTGACCAGTCAACAGTCCTGTTGACTGTTGACATCATCATGATGTCATGCTGATG
CCATAATAGCTTTTGCTAATTATATTAAATATGTTAATTTTAGAATATTAGTAAAACTTT
GAAAATTAATATAAAATAATCTATAAGTCATAGGGAAATAATTTATATATGAAAATTGCT
CAGAAAAATCCCACGAATCGAGATACGCTATCCGTTCATCTATCACATGCTCCTAGCATG
ATGAACATGGAACTTTCCTCTCCAATTCATTTGTCCGGTAGTAGCTAGAGACCCGGAAAA
TATCGTCAGATATTTTCCCACTCCGTTCATGACGTGTAGTACTACGTTAGCTCATGCCTA
GCACTGCATATTGCCATGTGATGCATCACAATGCATTTGTGTGCCTTTGTTTATTGTTTC
CCCCCTCTTCTCTCCGGTAGACGCCGAAGCTACTACTACTGCCGGGTACGACTACCCCCG
TGACGACCAGCCTTTTGCAGCAGAGCGACAAGGCAAGCAAACTCCTCCTTGATCATCCCT
ATATCGCTCATTCTTTCTCCCTCATGCTTGCATTCGATTTTGCTACTGTTGTAGATAGTT
TCTATTTTGATGCATAGCCTATTTTTGTTAAACTGCTATTGTACCCTACTGCATATCAAA
TGCTTAGTATAAGTGTCTTAGTGATCCATAGTGACCCCACTAGCCCCAGTTGCCCCTGTT
TCATCATCGAAGACCCGAAGACACGATCGACTGATTGACTAGCCATGACATGTCACCTCA
CCTCACACCGCTTAGTTGTACGGCCCTGCAGAGCTACTACCGAATATCGAGGGTGGCACC
TTGTTATGTATTTCTGATGTTAGCCCTGGGGTGAAGTTAACCGTAGGTGGATTAGAGAGG
GTGATTCCTCATTTACCACTTTCGTTAGCGACTCTGTCATACAACTCCTCAAGCATGAAC
CATCGAGGGTAGTGGCGAATCAAAGGGGGGGGGGGGGGCTTCAACAGGCTTGAGCCCCCC
CTCCAAAAATTGAAAAACAAAATTTACTATTATTCATCATAAAAAAAAGTAACATTATTT
GAACTAAAAACTAAGAGTGAATGCATTTTTCTTCACACCATTAACATCGAGCCCCCCTTC
ATTTTCTTGCGAGATTCGCCACTGATCAAGGGTGATTCCTTTCAACCCACCTTGATTGCT
ACATCGATTGGAATCCATAAAAAAAGAATTACATCGAGGATGATACCTTAAATTCCTCTG
ATGTTATAGACACACTCTTACTTTTACTTATTAATGAAGTATGCAGGAGAGAATCAATCT
GAGGTGCCACGCGATCGCATCGGCCACGAGCACGGACACCGCTCATCAACTGCTTCGGCC
ACGCGAGACAAGATCCCGGCGGCGCCGGCTTTGCCCGGCAGCATAAGCCAGCGGCGGCCC
AAGGGAGGCGCACAGGGAGGGACGCTAGGAGCAGCGATCTAGTTCCGCGCGTGCCGCGTG
CGCGGGCGACACGGGCGTCCTTCCTCTCTTTGGTAGTGTAGATACATTTCGTGAACGATT
ACATTTCCAAATATATTTCGTGAGTGTTCCTAAAATCTCGGCAATATTAATATCGTATTT
GCTAGCAAGACACATTATTCCGTCCCAATTGTTACTCTACCACGCATTCTAGTTACTTGT
ATCTTACACTCTTCTTGGTGCTCTCGGCGCCACTGGCATGGCCAGGTTGGTGCTCGACCT
CTGTCTCCAGTGGCTTAAAAGTGTAGTACTTGACACATATGAAGTAGTAGATGAGGTTGA
GCCCCTGCAGTCCGACGACGAGCCAGTAGTAGTTATCCAGCTTCCCTCTGTTGAGGTTGT
CCTGTAGCCACTGCCCGCTCGCCTGCGTCTTCTCGTGCACGATGGTCACCAGCAGCGTGC
CGAGGTAGCTCCCCGCCGAGATGGTGAGCCAGTAGAGCGCCGCCGCAGTGCTCCTCATGC
TCTCGGGCGCCTGGTCGTACAAAAACTCCATGCGGCCGACGTCCATGAATGCGTCGGCGA
TACCGTGGATGGCGTACTGCGGCACCAGCCAGAAGACACTGATGGGCAGCGTGGTGCCTT
TGGGCGCGTCGAGCATGCCGCTGGCTGCGGCCACTGACTTCCGCCGAGTCTCGACGGCTG
CCGCAGCCACGTTCGCCAGCATGGCGATGGTCATGCCGACGCCGGCGCGCTGGAGGTGGG
TGATGCCGTTGGGGCGGCCGGTGAAGCGGCGGAGCACGCGGACGAGCACACGGTCGTAGA
AGGCGAGGGTGACAAGCATGGAGAGGTTGGTGAAGATGAGCATGGAAGCCGGCGGGATCT
TGAAGCTCCGCGTGATGTCGCGGTCCATGGTGCGCGCCTGCTGGATCGCGAAGCTGCTGT
TGTGTGACGACGCGGTCACCATGAGGATGCCCGCCGCCCAGATGGGCAGCATCCGGACAA
TCGACTTGATCTCTTCCACCCGGTGCACCGTCGACAACCGCCACAGCTTCGGCTCGCCGG
ACGGCAGCACGTCGCCCTCTGTCACTATGGCCGCCTTGTCAAAGAACCTTATCATTCAAG
AACTAGTAGTTAGCTCATGCAGGCTGCAGCCAAAAACCAAAAACCAAAATTACATAAAAA
AATCATCGGTTGCCAGTTTGTCACAAGGGGTGCAACTCACTTTAGCTGGTTGGTGTGGAG
AAGACGGCCGGTGGTGGAGATGCCGGCGTCGAGCTTCTTGTCCTCGTACAGGAGGTCCGG
GTCCGGCAGGACAGTTTTCCTCTTCTTGAAGGCAGCAGAGACGACCTGCGCCAGGCGGAC
AAGCGGGCTGCCGCCGGGCGGCATCTTGACATATAGCGAGTACCCGGACACGAAGCCGAT
CACGGCAAAGAACATGGCGATGGTGGGCACGCCGAGCCCCCACCCCCAGCCGACGTTCTC
CTGGATGTACACCACCACGGTGACCGCCGCGAGCTTGGCGAGCTCAATGCCGAAGAAGTA
CAGGTTGAAGAAGCTCCACATGGGAGCCTTGTCGTCGCCGTTGGCGCTCCGGCGTCGGCG
CGCGCCCACCTCGAGCTGGTCGGCGCCGAACGCCATGTTGCAGGGGCGCGTGCCCCCGGA
GCCGATGGACGTGCAGAGCAGCGACAGGTAGAGGATGGCGATCTGGTAGGTGGATGCGCG
CTGGCACTCGACCGCGTGCTTGGGGCACGGCGGCGGGCGGAGCGAGGGGAGCGCGGCGGA
GAGGGTGAGGCAGACCATGCCGAGCTGGTAGATGATGGAGCCGACGGTGATGGTCCAGAA
GCGGCCCGCGAAGGAGTCAGCGATGAGGCCGCCGACGAGCGGCGTGAGGTTGGTCGTGCC
GTGGTAGTTCGTGAGCACGTTAGAGGCCTCGACCAGCGGCAGGTGCAGCTGGAGGGTGAG
GTAGGAGATCAGGTTCGACCCGAACCCCACCGTCGCCAGCCGGTCGCAGAAGTCGTTCGC
TGCAACAATGGCGGGAACTGTTATAAGACTAGTATATTTCAAATTTTACCCGTATGCTAA
AACATTTTTTCAAAATTTTTTTTGCAGGAGAACAAATTTTCTTATTACTTGTTCCAGAAT
CACAATCTTAATTATTTGCATTATTTGATACACGTGTTAGTCGTAGATGCTCTAAATACT
CTGAAAAGGTAATGGGAAACGCTGTTGTCCCATCGACGGATCCTGATTTCGCGTCCACCG
TCTCCTTTGTTCGCCACGTGGCCGGGCGGACGAGCCGTGACCCGTTTCCTAAAACAACTC
CATTGTTTCTGCAACTTGGAAGTAGT