Map Locations of contig_47379 (10779 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location No map location




Predicted Genes from contig_47379

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_63204 5 3581 bp MLOC_63204.1 Available Available LOC_Os03g18980.1, FRAME:+3, EVALUE:0.0, 13103.m02270 protein kinesin motor domain containing protein, expressed





CDS Structure of MLOC_63204






Contig Sequence (10779 bp)

>contig_47379 10779 assembly3_WGSMorex_rbca.fasta
GAGGAGGAGCGGCGGCGGCGGCGGCGTGAGCAGGGCGCGGCGGCGGGCGGAAGTTAGGGT
TGAAACCTAAAAACCGATACCATGTAAGATGATGGAATGAACGATCTATCGATGAGGTGC
AACTGCACGTATATATGATGTACAAGATGACCACGACCCTAACTATACATAAATAGAAGA
TGGGCTAAATACACAATATACACATAACACGCATACTCAACATGACAAAAAACATCTTGA
CTAAGGTAAGGCTTGAACCAAACACGCTCAGGTGTGGCAATCTAAGACAATCTTAGTCAC
AAACCAAACATCCCATTAACGTGTAGTTTGCACCAAAGCATATTTGAATATGAAAACTTA
CACACATGTTTATACATCCTAGGTACATTTGTACTTCTTTTCAAAAGAAAAATAACTTTA
AAATACTCCATTGCACACGCCTTAGACCACCCAACAAGCTTTCTTTGTAATTAACCCCAC
GTCTTACATTATTGATTTGGTTTACTTGATCCCCATCCTTACAAGTATCCACCATATATG
TTTCATCAAGGGTCAAATCATGTGTTGGCGCTCCTGACTGCAAGGATCATATTGGAAAAG
AATCGTGATAACAGCTAGTTGTTGGTGGCTGTCATAGCTGAGCAGATTGAAAATAAATGG
CAGTGATTAGCACTGTAAAAAAAGCAGTTCATAGTTGCTGAGCCAAAACAATCAACATGG
CTCTCTCTCTCGAGAGAGAGCAGGGTGCACCTTACTCAAACAAGAACCCCAAACGGCGAA
GACAACGAAAGGCGGAGGACGAGAAATATATAAATCCCCATTCCATTCCACTAACCACAA
TTGTTTGTTTGTTAAACCCGAAGGAGCCGAAAGGAAAGCAGCATCGCCGCTACCCACAAA
GCTCCCACCTCTCCGGCTCCCCTCCCTCCATTATAACCACCCCCACAAAACCACCACGCA
GCGAGAGAGAGAGAGAGAGAGGGAGAGCATTGATGGGCTCGGCGACCGCCTAATTCCACC
GTCCATTTTCAAACCGAAAACCGGGCGCCTCGGATGGCGGAGGCGGCGTCGCTCTTCTCG
CTCTCCGCGGCCGCCGTGGTGGAGGACGTGCTGAGGGAGCACGGCTGCCGCCTCAGCGAC
CGCGACCTCGCCTCGCGCAGGACGGGGGAAGCCGGTCAGCGCTCCCGCTCTCACGTCGCC
AGCTGTTTTATTTTGGTTATTTCTGCCGCTTCGTGTTTGCTGAATGAGTTTGCCTCGCTT
GGTGTTGGTGCAGCGGCCAGGCGGAACGAGGCGGCGGGGTGGCTGCGCCGCACGGTGGGG
GCCGTCGCCGGGCGGGACCTGCCGGAGGAGCCGTCGGAGGAGGAGTTCCGCCTCGGCCTC
CGCAACGGCCAGATCCTCTGCAGCGCGCTCAACAGGGTCCACCCAGGCGCTGTCCAGAAG
GCAAGCAAGCGCTCGTTGTGTTCGTCAGTTTGATCCTCTGCCTCCGCCGCTGGCCTCTGC
TGACAGGTGACGCTACGCGCAGGTGGTCACGGCGGACTCGGTCGACGGCGCCGCGCTGTC
GGCGTTCCAGTACTTCGAGAACGTGCGCAACTTCCTGGTGGCGGCGCAGGAGATCGGCTT
GCCGTGCTTCGAGGCCTCCGATTTGGAGCAGGTTCGTTGTCGGGCCACCCCCGTCCGTGT
GCCGCCCCCACGCGGCCTTGCTTGCAGCTCCAGCAAAGCGCTTATGACGGCATCTTTGCT
TTAGGCGCACTCTCTCGTGGAGCTGTGCTGTGACCCTGATTGCGCCTTTTCTTCTTTCTC
TTTTGCCTTTCTGAGCGCAGGGAGGGAAGAACGCCAGGGTGGTGAACTGCGTGCTGGCAT
TGAAGTCGTACGGCGACTGGAAACAATGCGGGGGCACCGGGCTGTGGAAATACGGGGGGA
ACCTGAAACCGTCGGCCTCCGGCAAGTCCTTGGTGAGGAAGAACTCGGAGCCTTTCCGGC
GGTGCCAATCAACGAACGAGGGGGAAGCGCCCTATGAGGATGCTGGATTCAATGGCGATG
CTCAACTCGATTGCGGTGACATGGTTAGCTCCATGCACTGCCACGTTTGTTCTTCGTCTT
AATTTGATGGATGGAATCTGGTTAAATGCTTAGTGGCTTGATGCATTATTGTCTTGAAAC
AGTCGAGGTCACGTCCGCTGAAAATGCTGGTCAGCGCGGTTTTGTCAGACAAGAGGCCAG
ATGAAGTTCCGCAGGTAGGTCAATCTGCTCCCCCAATTGTTTTTTGATGGCTTACTGATT
CAATGGGATATATGACAATTGGATTCCCCTTTTCGTCCGTTGTGTTGTTTGTATGCAGCT
CCTAGAGTCGATGCTGGGTAAACTCGTTGATGAATTCGAGAATCGCTTGAAGAGTCAAAA
TGAATTGGTACTGTTTGGTGTCATTTTCTCTGTATTTGTCTCTTGTTTCTGGAGTCTTTG
TACGTTGTGCTTACAAATGGCAATGTGATAACCAAAATCAATCCATTGGGACAGGTGAAA
GCGGCTCTGAAAAATGGTACAGACAGCACCAAATGCTTCTCGAAATCTAAGGTTCTGGTC
GAGGCCACTCCTAATTTTAGTGAGAGAAAGGCAAGCTATAAGTTACTCTTCTTTATGCTT
CAACAATGTTTCTAATTTTACTCCTCTAGTAAGTAGTAACGTCTGCTGCTAACAGTGATA
GTTAGGATTACCATGATACTATATTTTTGGCTTTCATCCAACATTAATTTTGGTATTATC
CTCTGTAGATGGATATGCCAGGGATTTACTCCAAGCATAAACAAACAAAAAAAGAAACAT
CAGGGATAGTGGCACTGAAGCAACATTCAATTCTCCAACAGCAATCAAAGCATCTTGAGG
TAGTATTTTAGTATTCATTATTTCATTTACTTCCATAGTTCTTGAGAGTGGTTACATTGC
CGTTTATGTTTCTTGTCCATAGGATCTTAAGGCTAATCTTCAAACAACAAGAGCGGGTAT
GGAGTTTATACAAATGAAGTACTCTGAGGACCTCAACATATTAGGTATACGAGTCTACTT
TCGGTGCTTCACTACTACTTTGATATAACTTCACTTAGCACATCATCACTATTTGCAAAA
TTAATTTCAGGAAGGCATCTGTTTAGCCTTGCGCATGCTGCCTCCGGTTACCACAAAGTT
CTTGAAGAAAATAGAAAACTGTACAATCAAGTGCAAGATCTTAAAGGTATGCTTGTTTTA
ATAAATATTTACACCCAGTTTCTGATCCAATTAAGGAAAATTTTGGTACACCGAAAACAA
TTATTACCTAAAATATGAAATTTCTTTGTATGTCTTGTCTCTAGGTAGTATCAGAGTGTA
TTGTAGGATACGACCCTTTTTACCTGGACAAGTAAGTTCTTCCACTGTGGGCTGCATCGA
TGATGGAAATATTTCCATTATTACTCCCTCCAAATCTGGAAAGGAAGGCCGGAAATCGTT
TAGTTTCAACAAGGTTTTCGGCCCATCTTCAACTCAAGGTATTTTACCATCTCCTTAGTT
TTCTTTTCAGTGTCTTATGTGGAAGAAAATTCACAGAAAATTCCGTTGTGCAGATGAGGT
TTTCTTAGATACTCAGCCCCTTATTCGTTCTGTTCTTGATGGATACAACGTTTGTATCTT
TGCATATGGCCAAACTGGATCAGGCAAGACATTCACAATGGTGAGCAGTGAGGACAATAG
CACAATGCCAATATTTTCTGTATGTAATACCTACTTATCATGCAGGCCTTCTTTATTCTT
AACATCTTCTTTTGGTTTTATATAGAGTGGACCCAAGAATATGACTGAGCAAACCCAAGG
TGTAAACTATCGGGCACTTGGTGACCTATTTAATCTTGCTGAAAAAAGAAAAGGAACCTT
TGTCTATGATATTGCTGTGCAAATGATCGAGATTTACAATGAACAAGTCAGGGATCTCCT
CACCAGTGATGGTCTCAACAAAAGATATCCTTACTGAAATCATATTTCTGTCAAATTGTG
TCAGTTTCTTTTTAACACATTGCTTTCACGAAAATCCTTATACTGTCATACAAATAATTT
TCTTTAACAAATATATACATTAGAGATTCGGAATAATTCTCAAAATGGAATTAATGTGCC
GGATGCAAGCCTTGTCCGTGTGGCGTCGACGATGGATGTAATGGAACTGATGAACATTGG
ACACAGGAATCGCACTGTGGGTGCCACTGCGTTGAACGACCGGAGTAGTCGTTCCCACAG
GTGACTTCACAACCTTTTCTGTGCAACTAAATTAAATATTTAATATAATTATGGAATATA
ATGAAGTATTCTTGTAAACTTGCAGTTGTTTAACTGTTCATGTCCAAGGAAAAGATTTGA
CATCAGGGAACATTATCCGTGGCTGCATGCATTTAGTTGATCTTGCGGGCAGCGAGCGGG
TTGACAAGTCAGAGGTCACCGGAGAAAGGTTAAAAGAAGCACAGCATATTAACAAATCAT
TGTCAGCCTTAGGGGATGTAATTGCTTCTCTTGCCCAGAAGAATGCTCACGTACCCTACA
GGAATAGTAAATTAACACAACTCCTCCAAGATTCTCTTGGTAAGACGATTTTCCTGCAAT
TCTTAGTACATCAGACTATTGAGTACAATTGGCACTGCTTTTCATTGTCCTACATCGATG
TATTAACAGGAGGTCAGGCCAAAACCTTGATGTTTGTTCATATAAGCCCGGAAAGTGATG
CTGTAGGAGAAACCATAAGCACCTTGAAGTTTGCCGAGCGTGTTTCTACAGTTGAACTTG
GTGCTGCTCGACTTAATAAAGACTCCGGAGAAGTTAAAGAGCTCAAGGAGCAGGTTTTTT
CCTGCTACTATACTATATGATCCTTTCGTACTGTCGTCTATTATTCAAGAGTCAAGACAT
TCACAATCTCTATTCCTATTCAGATTTCTCGACTCAAAACAGCATTACAAATGAAAGATT
CAGGATCGGAGCAAAACATTACTCGCCACTCCGAGGCATTAAACACGAAGACACCTTCTC
CTGTTTTTACAAATAGACGACAGGGCAGTTGTGATTTGCTGCCTGGCCAAGCTAACTTCA
GGCAACCAATGGAGGATGTTGGAAACATAGAGGTAATAATGCCGTGAACTTTTGCATCAG
ATCTTACACATAAATTGAATGATCCACATAGAAGTAAAAGTTCAGCATGTAATCTTAGTG
CACTGATTGTACATTTCACTGTCCTTTCAGCTGATACCTTCAGCATTTCTACAATCATGT
GTGGTTTGATTTTTCTACAGGTTAGACCCAATCCTACATTGAGACAAAAGAAACCAAGCT
TTGATCTTCAGGATTTATTAGCATCAAATGATTCTCCTTCGTGGCCAGATAGCAATTCAA
GGGTGAATTTTCAGATGGGAGAAGAAAGGGAAACAGTTTGTGGGGACTGGGTAGATAAGG
TTGTGGTGAACAACAATCACTCCCTTGGTGATTGGGAAGGAGACAACGCAGCTCTTCCTG
ACTTCTTTTACCAAAGATACCATTCAGGTTTGAGAGATGAGCAGCAAAGACCTCGGTTTT
GCTCAACAAATACCGATGATTCTGATGATATTGACGTTGCAACGAGTGATTCCTCAGAAT
CAGATGCACTTTGGCAGTTCAATGTTTCAAGCATAAACAGTTCAATTATTCAAAGTGGGT
CAAAGATAAAGAAGCCACAAATGAAAAATAGGGAGGCCTCAGATACAAGGTAAGCATTTT
TTGTATTAACGCAGTTAACATTGCAGCAAACAAAGTTGAATTATTTGGAACACCAGTTTT
TTAGTATGATTAGTATCTGAAATACTTCTTACGATTCCGACTAAGTCTATGCTTATCTGT
CTCAATTTTGTGCTTGTATTTGACATGGAAATATTAGTTTTTTACAACCCCTTGTGGCAA
ATTAGTAATTGATCGATGCATCTTTCGGAAAAAAACGCAGGAGCTCCAAGACACAATTTA
TTTTTCCTGTTGAGATCTACTCCCTCCGTCTCAAAATAANNNTCTTAAGCTTAATACAAT
TTTGTACTAGATCTAGTACAAAGTTGAGACAATTATTTTGGGACAGAGGGAGTACATTAA
AAGGATAGCTAATTATACCCTAATGTACTTCATTCAATATGTAACCAAAAGTCTTCCTTG
CCCTTGAATGGTAGTAAATGTGAAGTACTAACCTCTCACCTCTTAGAAGGCAATAGAAAA
TTTAATGTTGGATTTTCTGAATGAATGTCTAAAATTAATTGGACATACCTTTAGAAAATC
ATTACCTGAATATTTTAATTTAATTTCGCTCACTTTTGTGATATATTTGGAAATAATGTA
TTAACGATTGATATACAGCAACAGAGTAGCAGACCGTTGCATAAGAGTTATCAAGTTTTA
TACCTAAAGACTATTTTTTGTTCTTAAATGGTCTTTATACCAGGACACCAAGTCATTCCC
AAATACCATTGGCGTCGAGAAAAGCCTCAAATGGACAAAACAGATCTGGAAGGCAACCTT
TAAGTGGTACCGATAGCAGAAGGCTTTCATCAAATGGTAGACACTCTGGTACGAAGTAGG
GATTCCTAAAATGATTGTGCATTCTTTTTTCTTGGCTTTCTTTCAGTTGTTTGTCATGAG
GGGTTGTGAGATTGTTCTCAAGTACAGGAGTGAGTGACAATAAGTCCAATTGGTTGTCTC
AGTGTGGTGAGTTGTGATCTCAACAGCTGGTGTGTGAGGCCATTAACCTTTTTTTTATTG
GCCTATCAGGCTTTGTTGAGTTTTTAGCAATTCCTGTCATGTTCATAATATATAATATAA
GGAAAAGAAAGGAAATTTGTTGATAAGAAAACTGCTTCTTTTTTTGTTTCTTCGAACGCT
TTTATCTTTCCATAAAAGCTCTCTACAACACGCTTTGATTCTTGGTTGTCAAATTTCTTA
AATGACGCCGCATTTTAGCTGGGATTCTTTTGAATGAATAAATGATGTCCATGGACCCTC
CCCCCTCCCCCACCCAATTTTTAAGCAACTGACTCAGTGCATCCGGATACCATATGTCCA
TGTTTGCTGGTTTACGTTAGCATTCTCTCAATAGCAATCTTTCTCATCATATCATGCATT
TCTGCAAGGAATCAAGCATAACCATATGATTGCATAATTTATCCCGAACGACCCAAGTCC
CTAAGGAGAGACACTCAGCTGGCTGGCATCAGCAAGCCCATTGGTAGACTTGCACAAGAT
GAGCATTAGACTAAACAAGACGTGGGGCATTGAAGCTAGGCCGGCGTTACCAACAGCGCC
ATAAGATCTAGTTATACCGCGGCACCATCAAGACCTTGGTAACGGCCATTACACTGTTAT
TAGGACGTGGCAATGCGGCTGTTGTAATGCTTTGTCACCCTTATATAAGGCAAAACTAGG
GTAAATTCTAGACAAGTTTTAGCAAGTTCTTATCAGCTCAATAGCTCCAAGAAGATCAAG
AAGATCACACAACGGAACCATATTGTTGATACAAGAGAGAAACACCCAACAAGAGTAGGG
TGTTACTCCTAGAACGGGGGACAAACCTGGGTAAAACCTCCACTGTGTGAAATCTTAAAA
TCCCGCACTTGGGTCATCTAAGCATGTCTTGCCTTCACCAAATCCCCAAATCATGAGTAT
TATCGTAAAAATCACGTGACAACGAGTATGCAAGCGACACAACTTGGAACATGATGGTGC
AGTACACCTAGGGTGGCCCATCACCTTGGAAGCGTGGTATTGTATCAACCTCAGGGCCCA
TGGGACTCACAATGGCACGGCTCCAGGAGACAGCCAATGGGCCCGACTCAGAGCAAGGGC
TTCATCTTGGACCTCTCACACATGAGGTCGGTTAGGAGCCTTGTAAACCCTAGATCTCGC
CCCCTTTATAAGGTGGGGTAGCTCAGATCCGTCTACTACATAGACAAAACTCTCGGTAGC
CATATTCACCATCCTCTTGTAACTCCCTCACGGGAGGTTCTTCGACATCAATACAAAACA
AAGCATCACATATGGTATTACCTCAACATGAGGGTCCAAACATGGGTAAACTCCCCGTGC
AGAGTCCCCTCTGGTACTTCTCGCTACACTCAGTACCCCCTCGAGGGATCTGACAGTTTT
CTACACTGTCAATTGGCGAAGCTTGATGGTAACATGACGAAATAGTGACATTATATTTAC
TCAGGCTCGGGCCCTCTCAAACAGGTAAAACCCTACGTCCTACTTCTTGTATTGATTGTG
TTGGAGTGCAAAGTACAAGATGATCTACCTCGATATCATATGTATGAATCTAACTTAACC
GGCCCTACGGACTAAACCCATGGCTTATATAAGGACTGAGGGTACGTAGGGTTATAGGAT
GGCCGGTTACATTTAGGGATAAACTTGCCGATGATTTTAACATGGCTTGAAGTGTGCACC
ATATCTTTGGGGGATTTCATCTTGAGTATGTCGAGGACCATGATAAACATGGCCCATTAT
TAGGTTGTGTGGTGGTCCTCAGCCTGGCCTATGACTGGTAGTCGAAAACACTATCAGTAT
CCCTTGAGTTGGTCTCAAAGCTGAGGATATTAAAGAACTCCTCGGAGTGGCTTCAACTTG
GGTCTTCGGCTTCGTAGGCGAGTTCAAGAAACTTTGATGCTTCTATATCGATTTCGTGTC
CGAGGACATCCTGGGACCTGAAGTCCTTGCGAGTTAGTTTACCTAACCTATTTGGCGTTT
GTCTTTATTGTAACCATTTTTAGTCCCGGAAGTTATGTACTTCGAACGTCCGAGGAGATT
CCATCAACAATGCTCTTTAGGATGTTTTTGTGTTCGTAGGATCTGAACACCCCACCTTAG
CCTAAGTAGCTTAATAGCGAAGTCTTTACTGGATTGACACAATAAGGTGATAGGGCCATG
CTCTGGCAATTTTGACCAAAAACCGAACCGTCACCATACACTATAGAACCGAATGGTAGT
GGTCATTACTCCCTGCTTTATCGTGGCTCGGGGCCGTTACCATTGATGCGTCTCGTCATT
AAAGGGGTCGTGCTCCATATTTTCAGCAACATCTCAACAAAATCCCTTGATTCTTACGCA
CATATAATGCACTTCGTGTTGGGGCAAGGCAAAATCACCACGCAACATCGTGCCTCTTGG
TATTTTCTTACCAGCCTATCAAGTGAGGAGGATGAATCTAATTCATTCCATGCCTTCCTC
ATTTCTTCCAGCGCCCAACCCCCACATGCTCAAGAGCCCAGAGAATAGAGTGAAATCTCC
AACCTTCACCCTCTTCCCATTTCCCTTTTCTCCCTTAGCAATAACCGGAAAGGGAACGAT
CATCGCCACCGCAACAACTGAGGAGAAGGCGGTGAGAAAGAGGGGGCTCTAGATGCCCTT
CACCATCACTGCTCGCAACATCGTCGAGCTCTAGGCGAGCGACTATCTCCCATCGCTAGA
AGAGGTCAAGTGGCGCTCGCTACTCGTTAGAGACGAGGTCCGCCCAACCTCCCGAATTCT
GGAACCTTGGGAAGGCGAGCGATGGGTGTTTATATCCCACCCTAACCGAGGTTTAGAGTT
TACCGTCCACTCTTTTCTCCAAGGACTCCTCTGTTTCTATGGGATCCAGTTCCACCATTT
CGCACTAAACTCCATCCTCCACATAGCCTCATACATAGTTTCCTATGAGGCCTTCCTTCA
CATACAACCTCACTTCGGGCTCTCGCTCAAATTTTTCTATGTTACACCACACAACAATGT
CCCTCATATCACATAGTGCGGTGGAGCCATGATCAGCAAGCTCACCAACATCAAGTTGTT
ACGCGGCAAATTCATTGAGACATTGAACAATGGAAAGAGGAGTGGTTCTACATGGCCGAT
ATGCCATTAGGGAACCATGAGGGAATCCCACTTTCTCGGCAGCTCCCTTGAAGATGATGC
ACTCCTGGATCGCCAAGAGCCTCAGTTGGTGCAACCAAAAGGAGGTCAAGGCACTACAGG
AGCAAGTAAAGGTCCTTATCGATAATGGTGTCATCTTGGTGGACATGATCATGTCATGCT
CCATCATGGGGTCCAGCCCCTCCAGGCGTGAGCATCTCCTCTACGGAGGTTTGTGACAAA
CAGCGAGGCTAGTGATCCGGATCTTCTACCAAGGAAAAGACCTAAGTCGGATGCTAACGG
TCGTCTTTAAACCCTTGTCCAAGGAAAATGAGTTCTGGATGGAGGGGGTGACATCGACCT
GAGTCGAGTAAGTCCAGCTTACGAGGTATGTTATGCATCTACTTTTACAATTTCATGGTG
TCTATTCCTTCTTATGCTTTTAATGGAATGATTGGCTCTAACCTCGCCATATCACATGAT
TGACATTCTTTCGCCAGATCGATTAAGTCACCAGCGCCTCAACATGGGGATCCGTGAGCG
TTGTGTTGGCGCAACTACTTACCAAGGACCCACACGTGGTAATAGTCAAGCTGAAGAAGG
TATAGGGGACCAAGAAGACCAGTGCAAAGGGGTTGGTCATCTGAGAAGCTGCTCCCGAGC
TCCCTATTCAAAGTCAACAAAGCTCGTACTCTCATTCTAGCTCCGAGCAGCAGGAGGAAC
CTAGTGAGGCTCCATCTCCCCAAGGAGGGAAGAGAGCACAAGCGACGTCGGGGGCGAGGA
GGAATTGCCCTCTTCCCAGACCTCCAAGCATTCGTGGAGAACTAGAGCTCCCACAGCGAG
TCGGTCCCCAATACCTGCTGATGGGGTTATAGTCCTAGG