Contig Data
morexGenes
Links



Map Locations of contig_47288 (1999 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location No map location




Predicted Genes from contig_47288

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_63120 1 1813 bp MLOC_63120.1 Available Available LOC_Os08g23440.1, FRAME:+3, EVALUE:0.0, 13108.m02401 protein amino acid permease family protein, putative, expressed





CDS Structure of MLOC_63120






Contig Sequence (1999 bp)

>contig_47288 1999 assembly3_WGSMorex_rbca.fasta
TAGAAATGGATGTATCTAAATATTAAAACGTGACTAGATACATTCGTATCTAGACAAATC
TAAGACAANNATTTTGAGACGGAGGGAGTATGATTTAATCCAACCAGCTTCTCCTAATCT
TTACCGAAGTATTTTTTACCTTGTATTTCTTGTGGCCCACAGCTAGCTAAAATGCATCCT
CACATTGTATTTATGGTTGTGCTTTCCCCTAAATGGATCTTCCTCTCAAATTTCAGTTAT
CATGTTTTTGATCTCCTGGTCTTTCACTGTTATCTCCCTTGCCCTTGCAAGCCTCATCTA
TTACTATGTGAGTCTAAAAGGGAAGGCTGGAGACTGGGGAGATGGGTTCAAGAGTGCGTA
TTTTCAGTTGGCATTGCGAAGTCTGAGATCGCTAGGAGGTATGACTTTCTGCATGGCAAA
GAAATAGTTATTCGTAATCTATTTACACATTATTCTAACACTCACTTAGCTTCTTCTCAC
AGCAAACCAAGTTCATCCTAAGAATTGGTACCCCATTCCTCTGATATTATGCCGCCCTTG
GGGTAAACTTCCAGAAAATGTCCCTTGTCATCCAAAACTTGCCGATTTTGCTAATTGTAT
GAAGAAGAAGGGCCGTGGTATGTCGATATTTGTCTCGACAATTGACGGGGACTATCATGA
GCTGGCTGAGGATGCTAAGACTGCCTGTCATCAGCTGGAGGCCTACATTGAGTACAAACA
ATGCGAGGGTGTTGCGGAGATCATTGTAGCACCTTCGATGTCTGAGGGCTTCCGCAGCAT
TGTTCAGACGATGGGCCTAGGGAACTTGAAGCCAAATATTGTTGTGGTGCGGTACCCTGA
AATTTGGCGTCGTGAGAATCTGACAGAGATACCGTCAACATTTGTGAGTATAATTAACGA
TTGCATCATTGCTAACAAGGCAGTTGTTATCGTGAAGGGTCTTGATGAGTGGCCTAATGA
GTTCCAGAGACAGTATGGGACTATTGACCTATACTGGATTGTGAGAGATGGAGGGTTGAT
GCTTCTTCTGTCTCAGCTCCTGCTCACAAAGGCGACCTTTGAAAGCTGCAAGATCCAAGT
CTTCTGCATAGCTGAAGAGGACACTGATGCTGCAGAGCTAAAGACTGATGTCAAAAAGTT
CTTGTACGATCTTAGGATGCATGCTGAGGTCATTGTTGTGACTATGAAATCATGGGAATC
TCACGTGGAGAACAGTAGCAGTAGTGCTCAGCCAGATGATTCACAAGAGGCTTACACGAG
TGCGCGGCGAAGGATCAGTGCATACCTTTCCGAGATGAAGGAAACCACAGAAAGAGAAGG
CCGGCCGCAGATGGTGGATGGGAAGCAAGCTGTTGTGAACGAACAAAAGGTCGATAAATT
CCTCTACACAATGTTGAAGTTGAACTCCACGATACTCAGGCACTCCAGGATGGCAGCTGT
GGTGCTGGTGAGCCTCCCTCCGCCACCGCTGAACCACCCTGCATACTTCTACATGGAGTA
CATGGATATGCTTGTAGAGAACGTCCCACGCATGTTGATAGTCAGGGGATATAGAAGAGA
TGTTGTCACATTTTTTACTTGATCAAAATACATACAGCCCGAGCCCCATTCTGTTGTCGT
GCCACCGTAGCACAGAATGGATACACAGATCAGATTCCATTGTTCTAGTTGGAAGGCCTA
CCTCGGTGGCTACCTTAGATGAGATGCACTGGGTTGTTATTGCCATGTTAGGTACGCAAA
ATATAGTGTCTTCATTCTTTACACATCAGATGAATACTTGGTCATTACAAATTTTGTACC
CCTGTTCTCCATACTTGACAGTTTTATTAGAAACACAATGCCTCCCCCCCTTTTCACCGG
AACAGTAGTGATATGATCCTGTTTGTGTTAATTTTCCATGACGAACTGTACGATCTATGA
AACTGTGCAACCAGTTGTTGAAAGGGGGCAATATCGATGCTATAATTAGAGAATATTTTG
GTAACGCCCGATGCTATAA