morexGenes - Barley RNA-seq Database

Contig contig_47225
Source Contig contig_47225
Contig Data
|Contig Location|
|Microarray Probes|
|Predicted Genes|
|CDS Structure|
|DNA Sequence|
morexGenes
Links
Map Locations of contig_47225 (6223 bp)

Morex x Barke POPSEQ 2013	Oregon Wolfe POPSEQ 2013	Morex Genome Release 2012
No map location
Predicted Genes from contig_47225

Gene ID	# CDS Predicted	Max CDS Length	Probes in Cluster	FPKM by Treatment	FPKM by Replicate	Top Rice Hit
MLOC_63045	2	2141 bp	MLOC_63045.1	Available	Available	LOC_Os07g01030.1, FRAME:-2, EVALUE:0.0, 13107.m00003 protein glycosyl transferase, group 1 domain containing protein, expressed
CDS Structure of MLOC_63045

Contig Sequence (6223 bp)

>contig_47225 6223 assembly3_WGSMorex_rbca.fasta
GGGTTTTGGGGGGAAATGAAATGGAATGGGGCGTGGGGGCGGGAAGGTCGTGCTGCTTTG
TGCCACCGACGGGCGAGCCAGGGGAAGGCAAGCGCGTGCGTCCCGCCCGTCCGCGTGATG
TTCGTTTCACCTAAAACCGGACCAAGTTTGGGCCGGGAATGGGTCGAAAGCAGACAGAAA
ACGGACAAATGTTCGTTTGCGCCCGCGTGCTGGGCCGCCTGATGTGTCTGTTTTGTTCAG
ACGCGAACGGACAGGATAGGATCGCACGCTGGAGTTGGCCTTAGACGGGAAAGGCGTCGT
CACCGCCGCCAGCAGGGTGCACGCTGGGGAGGGGGGTTTGGACCCACAACTTTCGTGTTA
AAGGTGGTCTTGTCTTATTTTAGAGCATCTCCAACAACCTTTGTATATTTGGCTAGGATT
GCAAAAACTGGAAATATAGCAACTTGGCCCAAAAATGTTGCTCCAACAGCTTTTGTATAA
GTGGTCCCTCACAAATTGTTTTACAAAGCTTGCTATATTTGCACCCACACTTGGTATATT
TGCAAAGTGGAGAGGCACTTGCTATAATTTTTAGCAACCCAATTTTTATGGTCCCCTACA
TCCCTTTGTTTCATTGACAAGTGGACCCCGCCGCCTCCTAGATTCCTGCTGCCTTGGGCC
TGGCACAGGTCCCCACGTGTCATTGAGAGGCTTGCTAAATTTTATAGCAATGCTATTGAA
ACAAAAAACTGTTGGGGTTGCTAAATGTTCTCTTTCCTCCTGCTATACCTAGTTTTTAGT
TTTTAGCAAGTCAGAATAGCAATGTTGTTGGAGATGCTCTCAGGGATGTTATAAAGACGT
CTTGTGTAAGCCAAAATCTGGTGTCAACGAATAGCAAGCAGTATAACATTTACAGCCTAC
CTCCAGAGCAAACTGGAGTTACTTCTGTTGGCTCCAATTTAATTAAGCATTACATATTCA
CGTTAGGTGTCCCAGGATTCTTTCTATCTTCCAAGACTGATGGGCTCAACAGAATGGTTG
ATTGATTCTATGACTTGAATACAACGAATCTCCTATGACTGATTTGTTATGGCGGCGGCG
GGAACAGGAGCAGACCTGAAGAGCCTCCGGAACACCCACTGGAGTGGTCTCAGCAGCTGC
GATCTCTTCTTGCGCCAGAACCAAATCGCGGCGCTGTACTGCTCGTTCCGAATTTTCCTC
GTCGCCGCCTTCCAGCCAAATTTCTCCATCTCCTTCCTGGCGGCCTTCCCCATTGTCTCT
CTCAACTCTTCACAGGAGAGCAGGCGTTCAACCTTCCCAACACAGTCATCGACATCACCC
GGTGTGTACAGAAAGCTGGTCTTTCCTTCCTGGTCCTCAGGAATAATGTCAGGTATGCCT
CCAGCTCGAGCAGCGACCACCGGAACTCCCGATGACATTGCCTCCAACACAACAAAACCC
AGCGTCTCTGATTCAGAAGGCATCACAAACACATCCCCACTGGCATAGGCCTGTGACAGT
TCTTCCCCTTGCAATGTCCCTGTGAACACTGCAGGCATTCCTGAAAACATCTCTTCAAGT
TCAGGCCTGCAGTAGAAGGCACATTTTAAGCATGGCAACAGTGTGTACTCTTCTTACAAG
AGGATTTCAGTCTCTTATTACATAAAAGAAGAAGCAAGTTTCATGACAATATGCAAGAGT
CACTTTGGAGAATAGATCAGTAGTTAGCAATTTCAACAGTCAAATCAACTACACTGTGCC
TTTTTCTACTGAAGGAAGAAATTAACTAGTTTCTATGATATAACGATCCACACCTGAATG
GGCCATCTCCAATGAATGCAATTCTTGCTCCTGGAAGTCGGTCCATGACTCTGGAAAAAA
CAGAATCCGATGTCAGCAGTGAGTGACACTTGGTGAACGCAGGATATGAATTAGCTAGAT
AAAAAGATCAAGATTAAATTATGTCAATAAAACATTATGGTAACAATAAGGGGGCATGAG
CAGCAGGTAAGGTTTCGATCACACACACCTTTCACTTTGCACTGCAGCGTTAAAAATCAG
AAACGTCATGAGCTCACCTCTTATGAAAATCCAAGCTTTTCTCAACTCCTAAGCGTCCAA
CATAGATTATCAGTGGCTTCTCTGGTTCACCGTTCCTGTCATATAGAAGAAGCATACAAG
CAACACAGTTAGTCACGTGAAAGATATATCTGATCATATCGACTCATTCTGCAGTTTCCT
TGACATACTCGGCGAGGCAAGAACCCATTAGCATCATTAAAACTGCATCACAAATGGACC
AGCTGAGCAAACTAGATTACATACGTTAGCATTGACCGCATTTCCTGATTACGGAAACGA
GGATGGAAGCTTTCTGAATCCACGCCCTTGTTCCAAAGGCGTATCTTATTGGCTGGAAAC
ATGCACCGTGAGAGGAAGATGTTGGACCTTGGAAAAAAGTGATAGCATGGAGTAGTATGT
ATGTTTGCGCAAACCTGCTGTAACACGGGCTGCTTTAAGGTCCCTGCCAATAGCGGCTGA
TGGTACCAGTGTGAGATCCGCAGCTCGGTGCAAGAATTCTATATCAAGCGAAGATTGTAT
CAGCTGGCTAGTCTGGCAAGAGAGGTTATACATTTGTGAAGTACTCCCTCTGTACACTAA
TGTAAGACGTTTTTGCAGACTGCAAAAACTTCTCACATTAGTGTACGGTACATAAGAGAA
AACTTACTTATAACTAGCCACATGGGCTTGACAAGCCAGCTGAATGTATACCTGGGAATA
TAACTGTCATAGATAAACAAGGATCAGGTCGCCTCTCTAGCTGGATAAATTAACCCATAA
TTCCTTGGATTATAGATATCATTCACGAAATGCACATAACATCGTGGATGGTGTTTTTCT
GCTAGGAGCTGAAGATTAATTAAATGGTCTAGCTGTGTTGGCCTAGATAAGAGAAGATAT
ATTTTCAGTTTTGTTCAAGTTGCAGTTCTGTTGCTGGCATAAAATCTCCTTGTGTTTTGG
AAATGGGTGTGCATGAGTTGTAAATTTGTCAAAGGGGAAGGTTAGTCAACTCACATTGGA
ACATGGGTGTGGTAGGACATTACTAGAGGGACGCATAGCAATTTTGCGATGATTAGGGCG
CCGAATACCTGGGAATTTAAGGAAAAATATGAAATCTCCATTATTGTCGAAATACAGAAA
GGAGATTGGTTAGTAGCATACCATGATTCCAGGGGAAGAGGCGTGGATAATGTCGGGCTT
GAACCTAGCGACTTCTCCAATGATTCTGGGGCTGAGGGCAAGCGAGAGCGGGACCTTCTG
ATACCAGGGGCAAGGGAAGCTCCAGGATCCGATGAGCTTGGCGCCGTGGAACTCGTCGGG
GACGCCCTCGTGGGTGGTGATGACGATGACCTCGTCGCCCATCTCGCGGAGGTACTTGAT
GAAGTTCTGGAAGCGGTTCTTGTAGCCGGAGACGTAGGCGAAGGGGGAGGGCTCAACGAA
GAGCGCGATGCGGCGGGGCCGCGAGTCGGCTTCCGAAGCGGGCGGGGGCTCCTCCTGGTG
GTCCAGCTCGTCGTCCCGCAGCAAGACCGGCGACGAGGAGGAGGAGGAAGAGGCACTGGT
GCTGGTGCTGCATGACGACGACGGCGAGAATGGGAGGAGGAGGTGGCGGCGATGCAGGCG
AAGGGAGCCAGCCCGTTGGCGTGACGACGGAGCGATTAGAGGGAGAGGAGACGGCTTGGA
CACGGCGAGGATGGGCGCCGCCCTCGCCATCCTTGCCTCGTCCTTGCAGCAATTTAATCC
TTTTCCGATACTCGTTTGCTTTGGTTGAATCGAATCGAATCGATTGAGGTTACTCGCTCA
CTGGGGCGAGGCGAAGAAAGCAGAGCTGGAGCTTGGAGCTGGAGAGGGGAGTGGACGCAA
GTCAGGGGTTCCCTCTTGGCCTTGGCCTTGGCCTTTGACGCACTCGCATATTCGAAGTTT
CGAACGCACCACACGAGACGAGCATATTCGAATGCCAAATCGAATTGATCAAGGCATCAA
GCCATGACTGAGCGACCGCATCTCTACACACACGCACGCGCTGTATCGCTCTTCCACTCT
TTGCGGTTTGATTGAGGGATCGAAAAGGCCAAATCTCGGGGAACATTTGGGCCCCGAGTT
CCACGAGATATCGCATTATCCGATTCCAGCCAATCAGCTCCCAAGTGCTAGCCACTCACC
AAACATGCGACTGGTTCTCCCTTTTTTTTCTGCCAACACAAGACTTTTTTTGGAGGTTTT
TTTCTAAAAAAAATCTCGCCGTTTTATTCATTAGCAACAATAGACATAGGTACAACGTTT
GGATCATGAGGATTGTCCCACCAAACATATCTACCTACTCCAAGATTACAAGTAAACTTA
AAGAGTGTCGGCTCAATGAGACCTGGGGTATCATGGCCCGTCTGTCGTTGGCCCGAAGAA
CAACGCGTAGGCTGGCTCAAAAGAGGCAGACGGACCGTGATACCCCGGGTCTAGGGCACC
TGTCGTGCCTGCCGCCCTTGGCACTCCCGGGCGGCGCCCCGGGCCGCCACAGAGCCTGTT
GGGGAGCGCTTGGCCTCCTCCGTCCACCCGTCTGTGAACGACCAAGCACGTGACTACTCT
ACCGTCGTCTCCTCGCTCGCGCGTCGTAACCCTCCTAGTCCGCACGTCGCACTGCTCATG
ACCCAGAAGCTTCTGCGCTATCGCCCCGCCAACGACGGCTACGAGGCCTGGCTCGAGCGC
TTCACCGAGCTCGTCGACACCGCGCACACCACCTTGGGCCATGATGGTCCGGCGCCCTCC
CGCTCCATGCTCCCTCCACCGTCACATGTCGACCAAGCCGAGCACGAGGCTCCGCCTCCT
CCTCTTCCTCCGACGCGCACGGCGAAGCCACCCCACGGGCCGATGGCACCGGCGGTCGAC
GACGAGAATTGCCAAATCATCCACCACGCGCCCCAAGACGCGCATGCGGGTCACGAGAGG
GCGCCCAACCGCGAGGACCGTGTTCTCCAGGACGTCGCCATTGATGGGCACCAGAATTGC
GCGGCCCTCAACGGAGGTGTCTCCACCACCGGGGCCTACTTGGCCCTCACCCTCGAGCTG
TGCTGCATGGTGTGGCCTGACAAGTTCAAGCCGAAGCTTCCTCCTTGCTACGACAGCAGC
GCCAACCTCATGGAGTTCCTCGTGCTTTATAGCATCAGCATCCAGGCCACAAAGGACGAC
GACCAGGTCATGGAAAACTAGCTCCCCGTGACCCTCAAGGACGCAGCACGCGCATGGCTC
CAGAACCTCCATGAGGCGTCCATCTCTTCACGGGAGGACCTATGCAAGCAGTTTGTCGCT
AACTTTGCGGGCACGAGCGACCACCTCCTCACGCTCAACGACCCGCGGGTCGTGCGCCAG
TGCCCTAACGAGCCCCTCCGCAAGTTCATCCATCACTTTAGCCAGGTGCGCAATAGGATC
CCGAGGGCCTCCGATGCCACCATCGTCTCCGCCTTCACCAAGAGTATCACCGATGTGAAG
ATGTGTGGGAAGCTCTCCGGCAGGGACGATCTTGACTCTGCGGCAGAGCTCTTCCTCCTC
GGCGACCGATGCGCCATGGCCGAGGAAGGGCGCCTTTTCCTCTGCGACGGCCCTCGCACC
GAGCCTGGCACGGTGAAGCCCAAGGACAAGGACTCAAAGCACAAGGGCCCTGTCATGCTC
AAGGCGGAGCCCGAGCAGCAGCACATCGCGACCGCAACGAAGCGCCCAAGAAGCCCTTCC
GCGCCTACCACAACGTGAACTCCGACAACACCGAAGGTTGCCACGAGCTCACGCAGCTCC
GTGAGGGCCGCGCCGGTTGCCATGGAGGCCACCAGGAGAGTGGCAGCGGGCGCGGAGGTG
GCTGATGGGGTAACAACTATGGTGACACTTGTTAGGGCTGGCACAACCAGCCGTGGCAGG
ATGACCCTCAGTCCAACACTGCCCCACCACCCGCCAACAAAGCCCCTCCTGCTGAGAACA
TCGGGGCTGCCAAGAGCCTCGCAGGGTGGCCTGCATCCTGGGCGGCACGTCACATCAGAA
ACAAAACAAATTCCTATGCTCACCAAGATCATCTATGAAGATCAACAGCTACGAGAGGAG
GAGTGTATCTACATACCCTTGTAGATCGATAAGAGGAAGCATTGAGAAACGCGATTGCTG
TAGTCGAACGACTTCGCGATCCAATCACGATCCATCCTGTGAT