| Morex x Barke POPSEQ 2013 | Oregon Wolfe POPSEQ 2013 | Morex Genome Release 2012 |
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Predicted Genes from contig_47173
| Gene ID | # CDS Predicted | Max CDS Length | Probes in Cluster | FPKM by Treatment | FPKM by Replicate | Top Rice Hit |
|---|
| MLOC_62997 |
2 |
859 bp |
AK355313 |
Not available |
Available |
None |
CDS Structure of MLOC_62997
Contig Sequence (8403 bp)
>contig_47173 8403 assembly3_WGSMorex_rbca.fasta
TAGGATAAGACCATCTTTATTTGTGTCGTAACTACAAATTCTCAGATTATAGACCATTTT
TTATAAATTAAGAGTGTGTGGTATTTCTTTCTCCCGTTGCAACACATGGGCCCTTTTGCT
AGTATATTATAAAATAGATAGGTATAGACATGCACAGAGAATTACTATTGTATTGTCCCC
AGCTTACTTTGGCAGGGTGAGATCATAGCTAACAATTATACTGCCTATTGCCAATAACTT
TTAGGACCACATAACTTTTCTGCTGTGCGACTACCGTCAAATACCACCTTGCAAGTATGG
TGCAATCATAAGCTGGTAAGTATCACTATGTGATGGATGTGCGCTGTGACTTGGACAATA
CTTGTGCATGTTGTTATACTTATTCGTCTTCTGTACATCAGCGGCATGATCGAACATGTT
GGCCATGAATATATGGACGAATTTTTTGCCTGTTGTGAGTCTTACTTGGCTGAAGATGGC
ATATTGGTCCTCCAGGTTAGTGTGCATGACAAATATCATTGTCAACAACTGAGTGTATCT
ATTTCGCAAAATAAAAATAAAAATGAGTGTATCTCCAAACAACCTTACGGCTGGTTTCCA
CTATCACTACAAACAACAACCAAGTAGTATATATATGCCTTATTTTTGGTGCACAACATC
GAGGATTAGGCCTTATTCTTTCAGATTGGCAGAAAACCAAATGATACGAAACATACTCCT
TCCTATCCAAGCAAGACCTTAGGCTTACACCAGCATGAACTAACCATTATCTGCAAATAC
ATACATGTGTGTTTAGTTCATCTCAGCTCCAGAGGAACGGTACGAGCAATACAGAAGGAG
GACGGACTTCATAAAGGAATACATATTTCCTGGTGGCTGCCTTCCTTCTTTGGCCCGTGT
AATGTCTGCCATGACCACGTCATCAAGGTTCAGGTACGTTTCATCCATCGATCGATGCTT
GATTTACTACTTCATGACCATGCATGGATCTCCACTGATTAATCCCTCCTTGTTCTTTGT
TGGGCACTGAGTGTAGCATAGAGCATGTGGAGAATATTGGGCCACATTACTACACGACTC
TGATGCGCTGGAGGGACAACTTCATGATCAACAAAGAGTAAGTATCACTTGCCATTCACT
ATAGAAATATACTGTCAAGTTAATTACGAATAACTTGGTCAAAGACTAGCGCACATATGT
TCATTGCGCAAATGAACTTGACTGATGATCATATACACATATACATATATTGTTCTAGTT
GGTTGCTCAGTTAGTATTAATTTCTTACCCTTTGTTTTTCTTGCAGTGAAATTTTGGCCC
TGGGCTTTGATGATAAGTTCATGCGTATCTGGGAGTACTACCTCATATTCTCTGCGTCTT
GCTTCAAGTCACGAACACTTGGAGATTACCAGGTATGTATCTATGTATGTTCTATGTATA
TATGTAAGTATTTACCTATGTTATTTCCAGACAAATGGAAATCATATGGTCTCTCTGGTC
TTAGAAAGACATATTGGAAATCAGAATGGTCTCCCAGATAATAGGGGCCATTATTAGTTT
CCATTGTAATAAATCATATAGCTTGGTAAGAATTAAAATCAAGAGGGTGTTCTCTTGAGA
AAGATCTAGACATGTGATTTTCACATAGCAGATCAAAACGTTCTATGAAATATTACTGGT
CAAAATTTTGACCAAAATTACGTCTGAACCTTCACTTTTGTGTGTGTGTGTGTGTGTGTG
TGTGTGTGTGAAAAGGAGAGGTACCCTACTGATTTTTGTGTGAACATGCAGGTTGTTTTC
TCTCGTCCAGGCAACCGTCGGCTAGCCGTGCCTTGATAGCCGTCAGATATCCTTGTCCGT
TCAGCTATCGAACCATTAATCTTTTATAATTGCTAGCCTGTTCCACCTTTGCTTTAGTTA
TTTCTACGTATTTGCCAATAATCTTTGTTCCCTGATGGAACTGTAGTGGGCTGCTGACAA
ACCAGCCAAGGATGTGTGTACTTTTATGCCTGATGCCCTTTTATGTTCAGTACATACATT
GCATGGTATTGTATCTTTATTTTCTACGATCTGTAAATGTTTGAATAGTGTTATTTATCT
TGTTTTGTTATTTCTAGAAGTTTCGGTTCATATCCACTTTGAAGATCTTGGATGTACATG
TACTCATGTACATCGAGGTCCTGATATTCTTGGAATGATCTCCGAGCTTTTGAGATGGAG
TTGGATCACCATCGAGAAGTCGACAAGATTGCTAATTGGCGACGATTCCTCTGGTTCAAC
TCCCAGAACAGTAAAACAAGTTTGTCTCAATAGTTTAGTAGGGTATAAATAAGTAGGGAT
GTCCTCAACCAATGGGCATATAAACCCGCTTTCTAAAAAAGCATTTAAAATGCGTCTAAA
AATATCAAAAAATCAAACCAAAATTTCATGCATACATCTTCGCAACATGGTGATACGCGG
CACAAAGTTTTGTTGAAAAATAACCTTTTATCATTCCTTTGCAAAAATACAAATTTTAGT
GCTTCTAAGTAGCGTTTGGCGATATATATATTTTTTGTATTTTGTGCACATGCCAAAGAA
AACGCTGTTTTTTCTGTGAAACTTTCTGGGCACATAGAATGTAAAGATATAAGCCCGGAT
TTTTTAGATATTTTTGGCACTTAGAAATGATTTTTTTTGAAGTGGATTCATATGTGTATG
GGTTTCATCCATATACTTTTCGGGTATAAATAGATGTAAGGGCATCTACAACACGGACCC
TCAAACCATCAATATCCGTGTGGTCTCATGTTGCCATTCAACACGGTACTCTATCGGTCA
GCGAAGCGATTCAACCGTTCATTTTGCCGCAAATCAGAAGGAAACTATGAGGGGTAGGAC
TCTGACACCCTCTGCTCACTCAAATCCCGCTCCCGGTCCGATTTTCTTCCACGCTGCCCC
AACTCTCCCTTGCTTTGCATCCATACCCTCCTCGTCTGCGCTGCCGTTGTACCTTTCTGA
CCACTGCTCATGCATTTCTATGTTAAGCTTCATGCACTAATCGAGGCAACCAAATGTCCA
AACTTATTAAAAGGGGTAGACAATTCACAAATACACTTCAACACCCCTCTCAAGCGTGAC
GCGGAAAGTCAACACGTGAATAGACTCATAGGTATGGCCCAAGAAGCATAAATGTGGACA
CACAGGGGGACACCAACAATTTTTGGATACATTACGAAAGTCAGAACTTGAACTCAATAC
CTTAATCTCTAATATCATGTTAAGATTCATGCGCTAACAAACACAATCAAAAGTCCAAAC
TTACGAAAAAATTAGGCAATTCACATATACACTTCAACATGTCGGACACCCATAACCCCT
GCCCACATACCTGCTCCCCTTGTACTACACCGCCATGTATCCACGATCCGTTTGCAACCA
GGTAACCCTCCCCCCACCCCCCGGTTGAGGTTGTCCATGCCGTGAGGCATGTTTCAAATT
TTGTAACTGTGAAAATATCAATTTATTCGCATGTCCTCGCAGACAGATTCGTGTAAAACA
AATGCAAGCACAAGCTACACAGAAATGACAAAATTACATATACATATGGATGTCTACTGG
AGTACTTGTATGCGAAGTAGTTGTAAGTAAAAAAAATACACATATACATATAGATGTATA
CAGGAGTACTTGTATGCGAAGTTTCATGATACTTTTATATATAAGTTGCACAAAAATGAC
AAAATTACATATTCGAGCACATGTAATATTCACTATAAAAGTACATTATTTTTTTCTTTT
GCACAGGCCACATAAAAGTGTATTTTATACATCTACACCACCCCGTAGCGCCGCATGACG
GGTAACCAGCAAGCGGCTTCAGGAATCGAAAGAGCTGACTGCACGCACGGACCCAAACCG
AGAGAAAGCCACTCGTCCACATGACGAACCCTGAGGACTCACTTCCCACCAATCTTGTCC
CCATCCACGGCAATTCACGGGCGCACCATAACGACACAGGCCGACCAACAACAAATCATT
TGCTCGTCCAAGCGATCATAGCCGACTTGATCTCCACTTCAGCCAACACAATACCGTCCT
CAGCAACCTGCAAGACAAATTCTATTCCCATGATACCCAAGACAGGAATCACAAAAGAGA
TAATGACAAACATCCTTTGTGGACGAATCAAAAATAGTTCAGTTCGGACTTACCTTAGGC
ATCGTCAAACCACTTGTTGAGAAGGTTGAGCTCCTCCTCGGAGCTCTTGAGCTTCTGATT
CATCTCCGCCAACTGCACGACGTTGGGGGATGCTGTCGAAGACGAGACATGCAAGCCGGT
TTATATGTATCAAACTCGAGAGTCATCGGATTTTGACTCCTCTACCAGAATTTCTTCAAT
CCTGCCAGAGTCTCGGGGGCTGCGGCTCACTTTTTATCTTTTCAGGGCTCGGGGGCTACT
GTATATGAAGATTACATACAAACCCATAAATTAAAATTTCTTTGTAAAAAGGAATATTAC
ATGATTTACCTTGAAGCCCGTCACGAGGTCATCGAAAGCTTCCTTCAGTCCGCTGTTAAT
AGACTGGATGCTTCGTGAAACCGCACCCAGAAGAGCGCGACGTTCTTCGAGGAGCCATTT
AAAGTTGCCTCCATCACGGCCGACCACCCGGTTTCGCCCGACTCTACTATAGGTGGCTCT
AGTGGCGGCACCTCGGCTTCCCTTCTAGGGGAAACCGGAATGGACGGCTCTAGGGGCCCG
GAGGTCTCTGGGACTATCTTCAGAGAGAGCTCGGGATGATCATGCTCCCCTGTTTTGTTT
GGCAGAAGGGATCTTCCCTCCTGGTATTTGCCGACCGAGGTGTTAACCTCGGCCATGATG
TCATCTCCCCCGGCCTTCATGTTCGGCCCAGGAGGGGTTCTTTGGGAGAGCACCTCCCCG
GTCTCTTCTGCAACTGGGATGGTGTAGTACGTGACGTGGTCCCTCTCTCTGCTAGTTCGG
CTGGCGGTGAATATCCCTTCGAGGCTTGATCAGCGGGGAGATCGCGCGATGGGCTGTAAC
ATGAAAGTGATGCATGTGGTTAGTAAATGAATCTCAATATGGAAAAATGATAGAGTCTTC
GGCTTCATACCTCTGGGCCAGGGGCTTGACCATGGGATTCCTTCGAGGAACCCGTTCGGA
AGTCTCGGACTCCTCAGGAGAGTCCGGGCTGTCATCAAACAGGGCCAATTTGGCTCTGCA
TTGCTTTTTTAGGGCAAGAGGAGGCAGCTCCCCCTCAGCGTCTTCAGACACCGCGCTCTT
CCTTGTCTGTGAGGAGTCACTCTCCTCCCCGTCCTCTTCATGTCCTTCCTCAAGAGCAGA
AGGGGCGTGGGTGTCCCTGGACTTAGTATCCGGGGGTCCTCTTGAGCGGAAGCCTCCTCG
TACCTCCTTCTTCTCGTCCCTCTTCTTATCCTTTTTCTCTGGCACCATGTACGGCGATTC
GACCAACATTTCCCTCGGCAAGGCCGTACTATGACCCTCGGGCAGCGGTGCCGGGCAGTT
AATCCGCTTGGCTTTCTCAAGCCAAGTCTGCGAAAGTGGGGAAGAAAGGGTTAAATGCCT
TTTTAAAAGGTAGCATCCGAATACAAGAGTAAACTTTTGACATGGCCCTTTAGGAGGTTG
TGCGGCGTCATGGCCGGTGTCTTCGCCCTCGGTTGGCAAAACCTTTTGGGGCTTGAACAA
CACTTTCCACATCCTTGTCGTGTGTGGTGCGGTAAAAGCGAAGCACAGTGGTAGGATCTT
TGGACTTGTTGGACCACATCGGGGCGGCCCATTGCTGGCAAGGTAGGAGGAGGTGGCAGA
AAAAGATGACGTGAACCACATTGATCAGCTCAAACCCATTCTCTATCATTGGAGATGCAA
CTCAATAGCGAATCCACCTCTGCGGTCGACCCCCAGTTGAACCCTTTCCTCTCCCATGAC
ACCAGCCTTGTCGGTGGTCCGGATCTGAATTTGGATGGCGCTGCCCAGTCCATACCGTGT
GCTTTGGTGATGTAAAACCACTCTTGTTGCCAGATTTTAGCGGTATCTATGAAGGTACCA
TCTTGCTATTCTACTCGGGGATCTTGCTAATCACTCCCTCCCGCAGTCTGCCTGCTCGTC
GCTAACTACCTTCATCTTGACATTAAAAACTTTTAGCCACAAGCCGAAGTGTGGCTGGAC
CCACAGAAAGTCCTCCCACACAATGATGGACGCCGAGATCTGCAAAAAATAATTCACGAG
AAGATCATTAAATCTAACCCTTAGAAAATCATCAAACCGCTTACAAAAGGGATGAAGTGG
AAAGCCAAGTCCCCACATGAAGTGGGGAATGAATAGCACCCTCTCGCCGTGCTTTGACAT
AGGGATGGCCTCACCCTTCTCTGGAACGCGGTGGGCTACGCCAGCCGGCAGATAGCCATC
ATGCTTCAACTCCTGGATGTCATTGTCGGTGATGGAGGCCTCCCACTTGCCCTTAGAGCC
AGAGATGGCCATGGTCGATTTGGAGGAGTGTCTTGAGGAGATTTTAGGAAAGGATAAATC
TAGGCGCTTGGAGCTCAGGAGATTGGGAAGTCGAGAGCAATGCGAGATCTGAGAAGCCTG
TGGAGGGTGAGGTGATTGTTTACCTTTTATAAGCCGTTGTAATACCAAGAGCGTCTTTAC
TGCACCGCAGACCTCGCCCCTTACCGATATAATCGCATTATTAAGCATGCGTGGGATAAC
CCAAATCATGAACCGTATCCCTTAAAAAATGATGGCATGATCTCCATATTGGTAGAACGT
GCCAATGGGGAAACTTCCTCGAACTGAGAATCGAGTTTTTGTAACTGGTGAGTGCTCATG
ATTGGCCGTGACCTTTCGATAAAAAGTTGTCACACGTTGTTCACACTTGAGCGATTGGCC
TTCGAGGCTAAGTAGTACGTACTGCTCGAAATTCGGGAAATCATCGGCGGACAAACTGGT
GATGGCCGAACATAGATTGGGAGAAGAACTCGCCCCACAAGCCAAAGACTTTGGACGATG
TTAAGGATCAAGACTACAACATTGGAGGCCAGTTTGGGGGCTACTTAGGGAGTCCGGGAC
TAAGGGGTCCTCGGGCCACCGGTCTGTCTCTATAGGCCGGACAAGTGGGCTGATCTGTGT
CTACTATTAAAAGGCCGAACTACAAGACGATGTCGTGTTTAAGGTGGAAACCTCCGAAGC
CGCGACGTGTACTTCAAGTCAAGTTGATAGAATCGACATATTCTCTCTCCGATGTAATCG
ACTATATGTAACCCAAGGTACCCCTGGTGTCTATATAAACCAGAGGGTTTTAGTCCATAG
ACAACATCCATAGAACCACCATCTAGCGTTTAGTTCATCTGATCTCGTGGTACATCGACT
TTGTAATTGTCATACACATCAATATAATCAAGCAGGGCATAGGGTTTTACCACTTCGAGA
GAGCCCGAACCTAGGTAAATATTGTCCATGTGTTCCGTGTTACCCATCAATCCAAGATCT
ACAGCAAGGGACCCCCTACCCGACGTCCGCCAGTTTTGGCACCGACACTTACCTCCTCTC
GTATGAGAGGGTATGATCTTGGTTCGAGTATCTTCCAGATTCTTTATAGTAGCAATTGGA
TATTCTCAAGTTAACGCAATAAATATAACTATGCTCCCCGACAACGGTGTCAGAAAAAGG
TCTTGATAACCCACAAGTATAGGGGATTACAACAATCTTCAGGGTAGTATTTCACCATAA
TTTATTGATTCAATGCAAGGGGATCCAAAGAATATTTATTGGCCTTAACAGTTGAGTTGT
CAATTCAACCGCACCTGGGATATCTCGCTCCACCAAACGTTTAGTAGCATGGCAAATAGT
AGTAGCAGTAACAGTAATAACATCAACTTGGTAGCAATGGTGACAGTGAAAACAACAATA
GTAACTTAGCAAGATTCAGTATATGAAAAGCGTAGGCCATGGTACAACCATAGAAAGATA
TGGATGACAGCAATCATGTAACAGTTACACAGAAGAGCGATATAGAACTAGCTTCAAATC
ATCAATATAATGTAGGCATGTATTCCATATATAGTCATACGTGCTCGCGATAAGAACTTG
CATGACATCTTTTGTCCTACCCTTCTGTGGCAGTGTGGTCCTATTGGAAACTAAGGAATA
TTAAGGCCTCCTTTTAATAGAGAAAGGGAATAAAGCATTAACACATGATGAATACATGAA
CTCCTCAAAATACGACAATCACCGAAAAAATCTCAATTAATGTCACCTTGGGGTATGCGG
ATCANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATAGGATCTAAACACTTTTCATATT
CGGAGAGAACACAATAAGTTTAGGTCTGAAATCATGACACTTGGGCACTAGTGACAAGCA
TTA
