Map Locations of contig_47141 (9502 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_47141

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_62968 1 703 bp AK248888.1 Available Available None
MLOC_62969 2 3750 bp MLOC_62969.1 Available Available LOC_Os04g53760.2, FRAME:-1, EVALUE:0.0, 13104.m05545 protein kinesin motor domain containing protein, putative, expressed





CDS Structure of MLOC_62968






CDS Structure of MLOC_62969






Contig Sequence (9502 bp)

>contig_47141 9502 assembly3_WGSMorex_rbca.fasta
CCCCCCCCCGCCCCCCCCGCCCCCCCCCCCCCCCCGGGGGGGCGGCGCTTCAACGAGGCC
GAGACCAAGGCCAAGGCCAAGAGTGGTGACATGCCACACCTCCGAGCCATCGGGCAGGCG
ATCAGCCTGCCTCAGTCTAGGCCTCGGCCTTGCCACCGCCGCTGTGCTCCACACGACACC
CGCCCGCGCCACCGCTGACGGCGACGAGGAGCCGGAGCCGGCCAATAACGGCTGGTGGCT
CACCGAGTTCCCCCTGCCGGTGCCCAAGATCCGCAACAGTACCGCCACTCTTCCATTCCC
ATATTCCCATACATGCTATAGCACCTCATCCTCATGATGCATCTCGTTCCTAGCGAGGCC
TCACCTTCAGGCTTCAACTGCTGAACTGAACCGGCACTGATGAATGTGGTGCAGAGGAGA
TCAACAATGGCGAGACAGGGACGCGATCCTTCGTGAAGAACGGCATCTACATGGCGGACA
TCGGGCCGAGCTTCGCGGCGCACGCCTACCGGGTGCGCAGCTCTGCCTTCGACCTGCTGG
CGCTGGAGGACCTGCTCGGCAAAGAGGCCTCCAACTATGTCAACAAGTACCTCCGCCTCA
AGGCCACCTTCATATACTACGACTTCGACAAGCTCATCACCGCCGCAGACCCCGACGCCA
AGCCACCGCTTCTTGACCTCGCCAACCGGCTCTTCGACAGCTTCGAGAAGTTGCAGGCCG
CCGTCACCACCAAGGATGACACCGACATAGGATCCTGCTATGCTGACACAAAGCTCATAC
TGCAGGAGGTCATGACAAGAATGGCATAGCCAGGACCCAGGAGAAACAGTTCTTTCACGA
ACTGAAACTCCATCCAGGATAGCCTCAGTTATACCATTGTGCGTGATGTAATGTACATGT
ACATTTGGTGATACTGATAAATTGGTAAGAGATACCACACAAGCAGGTCAGTGGAATACT
TCTTCCCAGCAATTCATGAGAGTTAATACAAGCCAAGCCATAAAAGGCTGAATGCCAGTA
CACCTACAGAGCTCAACTACGCTATAGTAGAGTATCAAACACCGATACAGATTAGATGAT
TGAAACGGAAACGTCAGCACGCCACACCTGACTGACTGTTAATATAATCAGCAAGAACAA
ACAACAAAGCAAATGAGAATATACAACCTCTAAATGCGGTGCAAATGATGGATTGCATCC
CTCAATTATCAACAAACAAACAACACACGTACATTACTGATGGCCCATGGATGGGATGGG
ATTTGACAGTGAATTGACTGCGTAGACTCATCCTTGTGACAAGCTGCGCATTTGAGTCTG
ACGACGAGGGACGCCGATCTCACAAGAGTTCACCCGAGCAGCAAAACGAAGCGAGCAAAT
AGACTCGCTTGTAGAAGACACTTCCGGGGATAGATTCACAAACATTAGCGTCTTCGAGTC
TCCACCCAGGCATGGCTGTGTACAAGGAAAACAGTTGTAGATTGTAAAATGGCACTAAAT
TATATTGAGACTGCACACCCTAATTTCGGTACTATGAAGTTACCTGGAGTAGATACGTCA
GCTTGGAGTTCCTGAATGGAATGTGTTCCTCTTTCTTAGCAATGGAGAAGATAACATCAC
TCAAGGACGACAAACTCTTGTTAATAGCCTAAATAGTTGAAGTTAACACCATATATGAGC
TAAGGATGTTACAAATGTACACTTAAATCACAAAACAAAGGGATAGCAAATTACCTGGGT
TTCCTTGAGTCTATCCCCTGTGACACCACTTTTGTTAAGCCGTTCACTGCCTGCAAGATC
AATTAAATTGAGAACACCTTGCACTTGTTGATCAGTTCCCTGCACAGAATAACAATGCGA
ACATTGAGAACATATTATGCATTAACTGAATTTATCAGTAAAAGATTACACACCTCATTT
ACACCAAAAATCCGAAGCGTGAAAACACAGTGACTTCTAGATGATTCTTCATTCATTTGT
GTTTTTCCAACTGATCTGCAATTAAGAACGAAAAAACAAATACTGGTTGAGTAGCATATA
TACATGCAAGTACAAAAAAAATGAGACACTGCAATCAAATTGGACACTTTTTAAAGAGTT
GCTCTGAGTAAATCAAAACATATATAGCATAACAAAAAAACATGGTACTAAACATCAATT
ACAAGAGTACAAAATATATGTTTGGAAAAGTTTTAGTTCAAATCAAGGAAATGCTGCTTT
TAACTTATTAGAACTTGCATCCACAATACGATTTTGCATGTGCTGTCACAACTTATCATT
GTTAAGCAAAAAAAAAAAGGATCAATGGTAGTTTCATTGAATGTCAAAAGAACTTCGAGT
CAACCTGCTTTGTGCAGCCCGCTTGAGCAAAGAAGAAACTTCGTTGATACTTCGTACATC
AACGATTGTGAGGTCAGACACCTGGGTATTACCATTGGAATCATGTTTGATATTATATTT
CGAAGCAGCACCATCTTGGATGGATGTGCGACTTGCCGCTAACAAGTCACGTATAGTCTC
ATTGTATATTTCTAGCATTGAAGCCTACAAAAAATAAGCTCAAATTAGGATTAAAGACAG
AGAATATCGGGTGAGTCTTTAATTCAAATAAGTAACAAATCAATTGGAACGCACCTGCAT
CTTATATTTCCATCCTTGTGACATAAGAGATTGACTAGTTTCAAAAATTTGTTCAAGCGA
TCTAGGTATTAACCCTTTCTGATCATTGAACTCAGGATTTCCCATCATAGTGTGCGTCTT
ACCAGAACCAGTTTGCCCGTAAGCAAATATGCATACCTATATAGTTCGAGATCGGTTAGT
TCCATAATACATCATCATTTGAGAACAAAAAATAGTTTTTTCTTAAATTAAAATAATTAT
TTTACTTTCAATTACATTCAATTCAAGAAATAAAAAACAAGCAAGTACTTGGCTAAAACA
ATTAGATGGAGTGTACAGTGATTAAAGGAGTACTTTTAAAACAGTTATTTTTTCTCAATT
TTGTGCATAATTTAATTCATTATTTATCGGTTCTGAAAATACAACAATAGTTATACCACC
ACTAAAAATACCTTATAGCCATCAAGTGCACTTTGAACCAACTGAGAAATTTCAGTAAAT
ACATCTTCTTGGGATGCCGAATGATCAAACACTTTGTCAAACGCAAAGGAATACGCTTGT
GCTAAAATGAAAGGAAAGTATATTGCAGAAGTTAGAAAGTATCATACATAAACATATACT
GAGTAGTAAAAAAAAGTAAATGTAACATACTGTTATGCATCAACTCGACACCACGACCTA
TGTTTTCTCCATTATTTGGATAAGAAACAGCTCCGGATTCATTTGACAATAAAGGCCGGA
CTCGGCAGAAAACGCGAATGTTTCCTTTAAGCTCCTGCAATACATTAATCTTATAAATAA
ACATACTATATGAGATTAGTATGAGTATTTAAAAGAATAAATCATTACGAGTATAGTGTT
ATGTAGTTTCTTCCGCAACTTCTCCCCATCCACAATTTTTTGCTCAGCTTCTGTAAGACG
TAACTGTAGGTCCTCCAACATTCTCTTTTGGTTTTCATATTCACTCATTGTCTCCATAGT
TGTTAAATTAGATCTCTGGATAGCAAACAATTCCAACCATTACACAAACATGCATATCAT
ATATTGAAAGTATGGTAATGTAATCTAAATAATAACAAGCATGCAGAACTGTTATAAATA
TTATAATCAAGGACATAATAGTGATACAAATGAATTACACTTTGCAGCTCCTAGCTATAA
ATGCTTATTCTGAGGCTAATTGTTAATATTTAAAAAAACAGAAATGTCAAATCAGAAACT
ATGGGTATGTTTGATTCTAGCCTATAACAACCCTGACAATATTGGCTTTCCAATTATTTG
GCATGGGATTCCAACGCCCAGGGTTGGCAAAAGATTTGGCAAGAATCTATGAAGGAAGGA
ACCAAGGACCCGTTGGCAGCCAAATATTTGGCAACAAACCAAACATAAAAGTGATTTGGC
GTGACCAATAGTTTGCAGATTCTACCAGCTGAAAAGAACATTTCCTGTAAAAATACACAC
CTTCAACTTTTCATTAGCCGATGCAAGTTGAATTTGCAGTGTTTTTATCTGCTCATTTTG
GTTTGAACAAGTTTCCTGCATGATTGAAACAAATAAGTCAACATAATTGAAATTGTTAAC
ATTATAACTGAGTGTGTATAATCATCATACCTCAAGTAAATCACATCGTATCATGACATT
CTCTAATTCTGTCGAAGACTTTCCTGTCAGTTCCTTGAACGCACCCAAGTCACTCAGCAA
TGAATTTATTTCAGCTGATTTATGATCACGGTCATCCCTTACTTGCTGTAATTCACCTCT
AAGAGCTTCAACCTCATTCAGTAAATTATTTTTTTGTTTCAAAGCTTCATTCTGTGAAGA
CTGCAGAAAGTAAAAGGGTTAGCTATGAGCATGTAACTTGCAAATGTAAGAAGAAAGTTT
AAGACATAAAGAAATGCAATTCAAAGATGAAAACTAAAATATTACCTTTGTCATATCAAG
CTGCAACTTTAATGAGTTAGAATGATCTTTCAAACCATTCATTGTTTCAACCATAGTATT
CTTCTCCTTTTGCAGCTTTTCTATTGTTTCAGCATTCTTTGTTGCATCAGCTTGGAGGTT
GCAATTATATTGCTGCAAGCTAGTGTTGTATTCCTGAAGCCTCTTATTTGTATCTTGAAG
CATCTTGATCTAAACATAATAGAAATACTGTTAAAACATGAACAATTGTGAATAAACAAT
TTAGTAGCAAAGATATTGAACAACAATAATACCTGATCATTGAGACGCTTCTGCTCCAAC
TTAACTCTGTTGAGTTCTTCTGAAAGCTCATTTCTTGAAGATTCTGCAGCAATCCTAGCC
TCCTTCTCGTCTCCATAAGATCGAAGGCATTCCTGCACTTTACAAAGTTGTGATTACAGA
TTGCTTCTTGATCCATAAAAGAAAAAATAGCAAAATGTACAAGGCACAACACCATTTGTT
CAGCTTCCACTTTCTTTAGGCTCTCTCCTAAAGTGGCGTATTGTTTCTGAAGCTCCTCTT
TCATTGAGACGGATTCTTGGATTTTGCACTCCAACTGAGCCACTAGATGGCACCATACCA
ATTCAGTCAGTAGGGTCAACAATTGTAAAAGTTTGAACACCAACAGATGAAGAAGTGTTA
CCAATTTCAGCATGATGTTTGTCTGCAGCATCGATTAGGCCATTGAGTTTCCCGATTTCA
GCAAGGTTTGCGTCCTCCCGCTCAAGCAACCATTTAATACAGGCACGCAGCTTCTTGATG
TACTCGATCATCTGCTCACTCCTTCCCTGCGGAAGAAATCGCATAATTGGTGTTGTTTAG
AAAACAGCCAAAGACCATAATGGTCAGTTCAGAATAGCAGGAAATAGTAACTCATCAGCA
ACACATGTTAGAGGCAGGACTAGTTTACCAAATCATGGAATTTCACTTATGCATTCATCA
CCCCGTAGAGGCATGGAATGCAAAGGGCAGGACAAACTACAACCTGGGCGCCAGATTAGT
GCAGTGGAACAGGTTCTAAATCGTTGTTGCAAGCTAAAAAACAGAATTTCGTGTCTCGGG
CTACCCAAAGGGTAGGACCGAGAGGACATGAAAACAGCAAACAAGAGGCAAGGCAATTCC
ACCAAAGCGGGAGAATCCACCTGATATTCTGTTGTCTGTTGCGAAAAAAAAGAGCATACC
TTGTAGTCCATCTTGTTTTTGCCCTTAATCTTCTCGTTGAGGAGGGCGTCGACGTCTTCC
CTCCCGGCGAACTCGATGGGGGCCTCCGTGGGGGGAGGCGCGGCGGCGTTCTGCGAGGCC
GTGGAGAGCGGCGGGCGCGGTGCCGTGCCCGCGGCCGTGCGCTGGCGCTTGGACTGGGTG
TCGTTCTCCTTGAGGCGGGGCATCGCCGCGCGGGCGGCACGGTCGCGCGTGGCCATGGCG
GTGCGGGGGCGCGCGGAGGAGGAGCCCAGGGGCGGTGGATCTTAGGGTTGGTGCGCCGGG
AGGAGGAGCGCAGCGCCGGATCTTAGGGGTTTTCTTTTTTGAAATGGCGAATCTTAGGGT
TGGGCGCGGGGTGGAGGAGCGTAGGGGCGGAGGCAGCGGGATTTGGTTTTGAAGAACGAG
CGGGGTGTGTGTTACTCTGTTTGAGCCTGAACGTCCAGGAAGGAAAAGAAAAACAGTTCA
GCCTGAAGGCTTAAACAACGCACAAGTGCACAAGGCCATAGCCATATCGTCACCTATCTA
CGCCCTGTCCATGTATGTTTCTCACATTTTCTACTGGACCCTCATTTAGGGTTTTCTCTA
CTCCGCCATCGATATCGCGTCTTGAGTGAGAGTCTTGGGTGACAAGGCTATTGTCAGCCT
ACTTTCCCTTACGCTCCTGCAACATTGTTCGCCTACTTTCCCTTACACCTCTGCGGTTAG
GGTTTCTTTTCTGAGAGGCCATCCGATCGCCCCAGAGTCCTACCCATCGGAGTCCGGCCA
GATCGGCGCCCCTCGCCGGCCATGGCAGCCCTCCAGTCCAAGACCTGATGGCTTCCACTT
CGGATGCCAACTCTGCTACGAGCGGCCGCTGGAAACTTCGATCTAGAAAATTTCTTCGAT
CAACTGGACCTCAATGACGAGGAGTTCAATGATATGGAGATTGACGAAGTGGATCCGGGT
ATCAAGGAAAGTGTGAGGTGGCTAGCCCTAGCTAGGGTTCGCACCGATAAAGACTTCTCT
CAAGCTGCCTTCTACAAAGATATGAGGGCGGCGTGGAACCCAGCGCAAGGGGTGAGATTT
CGGCCTGTCAGCCCCAATAGATTCAACGTCCAGGCATCATGCTTGGGTGATTGGAAACGC
ATAATGATGCAAGGCCCATGATTGTTCCGTAACTTGGTGGTGCTGCTCTGCCCGTATGAT
GGTTTTATTAGAGCGGAGGATGTCGTGGTCGATCACAATGCCCATGTGGCTCCAGATACA
CAAGCTACCGGACCCTTATTGCAAGAAGGAAATTGTTGAGAAACTCCTCAAAGGTGCTGG
CGAAATTCTGGAGATGTGTCTGAACGGCAACATTTGTGGCGACTATGTAAGGGTGAAGGT
GAACCATGACATCCAACAACCCCTTACCAAGTTTGTGAGTATAGTCCGTGCTAAAGAAAG
ACAGGTTTATCTTGTTCATTATGAAAAGATAGCCCGGTTCTGTAAGTTTTGTGGCCTAGT
TGGTCATGAGCATAAGGAGTGTGGCTTGGGAATTCATGGTGAAAAGAAGCTGAAGTTTGG
GGACTCGATGTATGCCGATGGCCCAAACAGATCACGATCTGAACCAAACTCTAGCAGAGA
AAATGGTCCTTGCCGGATAGAGAAGAATGGGGATCCCATTGCTCCGACGGATCTAGGGCT
GAGGAATAAGGACCCCGAAACTTTGGATACGGCAACAAGCCCATTGAAGAATCCCGGGGT
TAGGATGGAGGTGGATAGATACGCAAGGAAGAGGATGAATGTGGACAACGATGGTGCTAC
AACTTTGGACACCCCTAATAACCCGAAAGCTTTTCTGGCCATCACCGATGGTAGTGGGAA
GGATCTGAGGGAGACAGACTCGCCGACGAGCAGCTCCTCAAGCAGCAAGCGAGTAAAACT
CTCAAAAGGAAGTGGCAATAATGAGATACTGGCGGCCTCCCTCACGGAGGACCGCCAGGT
GCAATGAATAGCCTATCTTGGAACTATCGGGGGAACCATCGGACAGTTCTTGAGGTCTTG
GCCCTCTCAAAAGCCAATAACCCCAAATTAGTCTTTCTATGTGAGACTAGGCAAGTATGT
GCGGAAGTTGAGAAGTTGTGATGGAGACTTGGTCTGAAAGGCTTCCATGGCGTTAGCAGC
GATGGTAGAAGCGGCGGCTTAGCACTCTTTTGGGATGAGTCGTTGTCTATGACAGTTCTA
GAATCATGCACTCAATTTATTGATGTCACAGTGGTGTGGATGGTGGTTCAGGTTTGTCTT
GGTGAGACACCTTTGTCTATGGGGAGCCTCGTGTGGAGAACAGACACCGCATGTGGGAGC
ACTTATGTAGGCTGCGGGCTAACTCGCGTGAGCCTTGGTTGGTGTGTGGCGACTACAATG
AGGCACTGTGGCAGCACGAGCACCTGTCAAGGACTGTGCGGTCTGAAGCTCACATGAATG
CATTCTGGGAGTGCTTGGAAGTTTGCAAGATAGAGGATCTCGGCTTTTGTGGCATTCCAT
TCACGTACAATAATGTACAGGCAGATGATCACAATGTCCAGGTGCGCTTGGATCGAGCGT
GTGCACATGAGGCTTGGCGGGACACTTTCCCGCTGGCAAGGGTCCTTCATATTGCCACCT
CATGTTCTGACCATTGTACCCTCTTGATTACACTGGAGGGTGCGCAGGACCGAAGGCGTC
GGGCATCTTGCCCATGTTACAAAATAATGTGGGAGTGTGACCTCACTCTCCCCGACGTAA
TAGCCGGGGCTTGGGACAAACATAGGTGAGCCAACAGCTTGGGCTCACTGGCTACCTCCA
TGAAAGAGGTGATGAAGGAACTAAGACAGTGGAGCAGTAAAAAAATTGGTAATGTGCTGA
AAGAAATTGAGGTGCTCCGGTCGCAACTCATGGAGCTGCAGCTATCGGGGTCATATCATG
CCCAAATTTGATCCAAGATGAACTAGCTCGACAAGTTGTTGAATAGAGAGGAGATGCTTT
GGCTACGGTGCTCGGCTAAAAAAGGGCGAACGGAATACCAAATATCTGCATAGGAAAGTT
GTATGGTGTGCTAGAAGGAACCATATCCAGCGTTTACTAAAGAATGATAGCGCATGGTGT
AATGTTCCTACCGAGATGGAAAGGATGGCCCACTCCTACTTCAAGGAGATCTTTACTAAG
GATCCAACCATCTCCGCGGATGAGATCCTTGATTGTATCACGCCTAAAGTCACCTTAGAG
ATGAATGAGTCATTATGTAAACCTTATATTGTGGAGGAGATTTCAAATGCTCTATTTCAA
ATTGGCCCAGTGAAGGCCCCCGGCTGTGATGGTTTTCCAGCTAGGTTTTATCAACGGAAT
CGGGCGCTGCTAAAAGATGAAATTGTTGCGGCAATCCAGGAGTTCTTCTCAATGGGTGTT
ATGCCTACTGGTGTTAATGACACAATGATAGTGTTAATTCTGAAAGTCCCTCACCCAAAG
GAGCTCAATGACTTTCGCCCAATCAGCTTGTGCAATGTGATATACAAAATTGTTTCAAAG
TGTATGGTGAACAGACTGCGACCCCTCCTCACCGAGCTCATCTCTAAAAATCAGAGCGCA
TTCATTCCTGGGAGGCTTATTTCTGATAACTCATGTTGGAAATATGCCCTAGNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATAAT
TGTATTGCATGAAAACATAGAT