| Morex x Barke POPSEQ 2013 | Oregon Wolfe POPSEQ 2013 | Morex Genome Release 2012 |
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Predicted Genes from contig_47031
| Gene ID | # CDS Predicted | Max CDS Length | Probes in Cluster | FPKM by Treatment | FPKM by Replicate | Top Rice Hit |
|---|
| MLOC_62855 |
1 |
1760 bp |
MLOC_62855.1 |
Available |
Available |
LOC_Os06g43710.1, FRAME:+2, EVALUE:8e-166, 13106.m04581 protein glucosidase II beta subunit-like domain containing protein, expressed |
CDS Structure of MLOC_62855
Contig Sequence (8084 bp)
>contig_47031 8084 assembly3_WGSMorex_rbca.fasta
GGCCGTCCGCGTCGCCACGCCCGACCCTCTCCGCCTCCGCGCGCTCGCACGGTCCCGGTC
GTCCGCCCGCCCCCTCGACCTCGTTTCGCCGGCGAGAAGACCTGAGCTCCATCGCCTCCT
TGCCCGTCGGTGGAGAAGGGAATGGATAAGCTATGATGTCCGTTGAAATTCTTACAATTG
TAAGGGGGCTTTTTGAAACAATGAAGCGTTTTTTCAGATCCACTTAAAAAGGGACTGCGG
GTTGATTTACCAAAAACGGAGGGATTTTTTCGCAAAAATGCCACGACAGACAACCAGAAA
CCATATTTACTTTATTATTAGAGAGAGATATAATGTAAAACATAACAGACCAAAATCAAC
ATGTATATGCCAAATACAGATATATTATATTTCCTTCGTCTTAAAATATGTGTCTTAACT
TTATATTAGCTCTAGTATAAAATTATATTAAGTTTAAGACATTTATTTTGGGATAAAGGA
AAATACGTGTAAATGTTATCATTTGAGTATTTACTGCCAGCTAGGAAACGACCTTGTTAA
TTCCGAACAAACATCAAAGCTGCGAAGCCACCCGCAGCCTCGCAGCAAGAGAAGGCGGAA
ACAAAGTAGTACGCAACCCTGCCGAGAAAGCGGATTCCCATATGCGGAAGGCGTAAAGGG
GACAGGCTTGGAAGACGGCGGAAGGGACTCTTGGGTCGCGTCGTCTCCAATCTTCCACTC
TGACCGACTCCCGACCGACTCCGCCGGAGCCCGCCCTACGCCGTCGCCGATGGGGTTCGC
CGGCCGACCGCTCCCCCTCCTCCTGCTGCTCCTTATCGCCGGCGCGGCCGCCACCGACCA
GATCTTCACCACCTCAGGTAATCATCGATCGCGCCAGGGCCTCGTCCCGATCTCAGCCCC
TCCCTCCCCCTCTCGGGTCTCGGCCGCCCTTGGAATCGGAAGCCCCTCTTCTTTTCCGCA
TCTTCCTCGCGCACTACCTGGCCAGATCCAGCTCCCCGCAGCTCAAAATCACTCCACTGT
ATCGCCGCGTTCACCTGATGCGATGCAAAATTCCTAACTGGTTACCATATCCAGCTCGTG
TTGGTTTGTTGGTTACCGAAATTAGATGGAGGACTGCAAACTGAATTGCTGGTGATTTTT
CAGGTGTGCCGTTCGGGAAGAACTCGCGCGAGCCGAGGTACCGCGTGGAGTACCACCCCG
TCGATTCGCCCTACCACCCGGTGAGTAGTTTGACTCCTGATGAGTCCTCATTCCGTTCTC
CAGCAACAGGGAAGCTTGTGATTTTCTTCAGTTCTGAATTGCCGGGGTTTAACGAATAAG
AATTTAAGCCACCATTAGAGATGATGATACTACCAAGAAGTAATAATCAGCCCATGACAT
GTTAAATGCATGTAGTTAGCTAAGATCTCAAAAGAGCGAGGAATGGCAAGAGGAACTGCA
TATCCTCTGTTTCTCAAACGGGGGAATATGTTACTGTATTCACATGTTTCTACTAAGTCA
TGTGTATCCCATGCCATTGTCGTGTCGTTAGAAATCCTGAATTTGGGTTTTTCTTTATCT
AAAGTCCTTGCTGCAGAGGTTGCTGTTCGACAAACCTACTTCCTCTAGCTAATTGTAATT
GTTAACTAAAGATACTTGCTGTTCTTCCGCAGGAGAATGGCCAGGAGTCTGAACCAATGA
CTGACCACGAGGGGAGACATTACACCTGCTACCTACCAGTCGAAGAAACCAAGACCATGA
AGTCGATTGTCCCACAGAATGCAACCAATATTATTATAGAAAGCGAACGGAAAGTTAAGC
CAAAGGAGCCAGATGAACTGCTAGAGGTTCTCAAGGACCAGTGCTTCTACAGGGTGAGCA
TACAACTCTTTGTTTGTGCCTGATGAGCACATGGGACGTATGTTTGGTCTTGTTCATGTG
TGCCAGACTAATGGAACGCCTAAAAATGACCTGATTGTTATTGTTGTTGGTGCAGCATGA
AGGTTGGTGGTCTTATGAGTTCTGCTACTATGGGAAAATCCGACAGGTTCATGTAGAGAA
TGAGAAGGTAAGCCATTTTCTTTGTGAGGGTCATAGTAAATAGATTGTGCTTATGTTGAT
CTTTCTACCCTCCACAAAAACTAATTCTGAATTGTTTCGGTACAAATATTGCTAGCTTTA
AGAGGAGAGACCAGAACTGAACTCACTTACATTGTGAAAGAACCAAACAATTTATTCTTT
TGCTCAAATAGTATAATACGGCTTCAATTACGTATCTTCATGCTTTCACCAGTGTCATGT
ATGCATGTCGTAGTTGCACCAATAGTATTACTATGGCTCCAGTTACATATGTTCATGCTT
TGACAGTGTCATATATGCACGCCGTAGTTGCTAGCACTTTTGAGTTGCTTTATTGAGTGT
ATATCTTTTCTTGGAAGGTTATCCAAGAGTATGTCCTAGGTGAATATGACCCTGATGCAA
CCGATGCTTACCATGACAATCACACCTCCGAGTCTGCTGATGACGATCATGTGAAAGATA
CTTCTAAGAGGTATTATACTAGAAATTTGGAAAGAATGATACAAAAAATAAACTATATCT
GGGAGCAGAACCCTCTTGAATGAATTTTTGATGTTTCCGTGCCATTGCAGGTACCATGTC
CACGTGTACACAAATGGGACTGTCTGTGATCTCACAGATATACCGCGGTACACAGAGGTA
AGTAAAAACTAGGAAAGTACCATTATAGTCCATTTGGCTGTGGTTCTAGTAACTTGCAAG
CTGTTTGATCACTACGGAGTCCACCTGTTGAGTAGTGTATTTGACTGTATCCTAACCACC
TTTCCTTCTTCCTACAGGTTAGGTTTGTTTGTTCTGAGCCCACTGTGCTGATCAGTTCGA
TAAAGGAGATATCTTCCTGCAAATACGTCTTAACAGTCCAAAGCCCAATGCTCTGCAAGA
ACCCGTAAGTGTCAGCGTTTCTCTCTGTCTCGATGGTCTGAATGTCGCTGCATGATTTCG
GCTCATCACCTTGTCTTGCTTGCAGGTTGTTTCAGCAGGAAAAGCGCACCTTCTTCATCC
ACTGCAACGAATCGCCTGCCGAAGCAGAAGCTGAGGCCACCGGGGATGACGACTCTCTTC
CGAAAGAAGCTCAGATGTCCATTGTTCCAGACCCTGATGAATTGCATTACTACGCAGCTT
ATGCCACCTGATTGCCCGCCGGTCATGCTACCCTCATCTATCGAAGAGATAGCTGTTTTG
GAGGTTGCAACGGCAAGTCTTGACCATAGCAGCACTATATCCCTTGACTTGTTCTGTCTG
ACCCTGATCAGTGGCCACAACGCTCTTTGAGCGTATAGCAGGTCGAGGTCATCGAACTAG
TGCTGATCATAGAGTAATGTTAAGAGCAGAGAGGGTCGTTTCTTTCTGTACTATAGCACA
ATTTGGTGAAGGAGATATTTGAGATTCACTGCCAGGCGGTTGGCATCACAAACATTTCTT
GAAATGTCTATAAAAGATAATGCAGCGATCTTGAGAGGCTGCCGTGTTTGTGGACACCTT
CTGCTTACAAAGTAGAGGGATTGCTCTGAAGTGAAGGATCATCTTGTGAGCAAAGGTAAC
ACTTGCTTCTGGGTGCAGATATCACCTTGGGCCTGACCATTCTTTTGATTACTCTACCTT
TTGGATGCCAAATCCAAGTACAAGAAGCATGTGCTTCAGAGCTTAGAAAATGCGTAGTAG
TGGACGATAATCTGGGAGATGTGCACCCATGTTAGTAGTACTCAGTACACAACGATGAAG
AAATGCCTGATGGTGGGGTTGAATCCAAGGCAATGTGATAGTTAAACAAGGCGGGGTGCT
TAACTTTGTTGCACTCCGTCGTAGAACGTAGGGTGCACTTTGATCAATACAAATATTTTG
ACAATGTTAGATCATCTACAACAGACACGCGGTAGCGCCGTGCGTTAAAAAAAAATTGGG
ACGCCGAAATATCGCTAAATTTTAATGCGCCGTTGCAGCGCTTTAGCAAGCGCGGTAAAA
TATAGCACGTGTCTAGGCTAATTTTTTAAAATAATACATTTTAATTAAATTTGAAAAATA
TTGTGCAAATTGAAAAATAAAAAATAATACGCCGTCGGTCCCACGGGAGCCGATTAGATC
TAATTGGCTCAAGGAAGTTGACATGACCTTATCAGCCACACGACGGTCGGTATGTGGCCA
CTCGACCCGGGCTGCCTTCTGTCAGATGCGGCAAGGTCGACTGAGCCAGTCGGCCATTGC
CGCCTCAGCCACAGGCCGCGCCCCCCCTGTTCCTCATATCTTCCTCCTTTCCCCTCGTTC
CTTCTCTCTACCTAAAATGCCTCGAATTTTCTACGATATTTGAATCGATTTCTTCTCCGT
TTTCCATAGTAGTTGGATTCTAGAGGGTTAGGGTAGACAAAGGAACCCTCGATCTCGTGA
TGGGGTAGCTCGCGATGGTGGTGGTAACCATTTTGGTGGAGGTGATTGAGGTGGTGATAG
TGGAGGTGGTGGTGGTGTAGGTGGAGGTGGAGGTGGTGATGGTGGTGCAGACTCTTGGGT
TCGTCCTTCTTCCATCGGTGTTCGTCGTTTCTCGTCGACGTTCGTCATTTTTTGCATGCT
TCAAGGGTAAGATTTAACGTTTGTTCCCGTAGTATTTAGTTGTGGAAATATTTGTAGTTG
CTTTGCTAGTATATGTAGATTTTGAATATTTAGTTGCTCCGGTAGCTTAGGGTAATATGT
TTAATTGTATTGATGTTGATTCGGTAAATATCTTTAGTTTCTCTTTGTGCTAAATATTTG
TTCATGTTTCATAAATTTTTAGGTCTGCGGAGATGTTAGAGGAGTGAAGTTAGGTTTTTA
CTACGATCATAGTACTACGAGAACAAATCAGAATGGTGCCAATCTGAGTGAATTTCAGTA
CATTGAGGTGCCAGTGACTGCCCCTGAAACATGGTCTGTTATTCAGTTGACATAATGGTT
GGCCGGATGTTTAGGGTTTAATACTAAAACACACACCGTTGGTGTTTATGCATTATGGAC
CCGGTCTAATTGAAATATTTTTTTTATTTGAAGCAAATAGAGCGGGACTCTCAGTGGGTG
TGTTGGTTACAAGCTTGCAAGAGCAGGGGATGTAATCCTCTCGCCTTAGGCTCCCCATCG
TGAAGCAGGTTAGTGCACCTAAAACCGGGGGTGGTTATGATTATGGTCAAAGCAATGAAG
GGATGCATGATTCAATGTCGAATTATGCGTCCCATCCTGAAGATGATGTTTACGAATCAG
GGTGGAGCATTCAGGTAGAAGGAGAAAATGTTGATGATTATGTCAGTGGGGAGGCGGATG
CTGACGAGATAGATGGGCACATGAAAAACCAGATAGAGGATGAAGATAGGGATGGTGATA
TTGCAGATGATTTAGACGAGTCGGGCGAAGAAGAGAATGCACAGGAGGTGTCTAATCTTG
CATGATGGAATCAGGACTTCTCAGTTGCAATGACCGTGAATGATGGTCATGATTCTACGT
GGCAGTATCACCAGAACAACATTGCAACATGTGTAATGTATCCAAACAAGCAAACTCTGA
AGGATGCAATCATTGATTGGACAATGTCCACGGAAAGAGTTTTTGTAGCTGATGTGGTAT
TTCTGAGTTATGCGCAAGAAATCGGGGTTACTGGATGACAAAATCGAATACCATGTTCGA
TGTCTTTGTCGAGGAGATGGCGCAACAGCGGGTTATGAGGAAATTTGGTCTTTGACAAAT
GGTCGAGTCACACCCTATAGAAAACCCGCTGCAAGCAGTAGTCCACATGTATTGTATACT
TACTGAATATTGCATTGTCTTTCCCTATTGTTTAGGATGAAACACCGATTAATTATTAAA
CAAAGCTCAATTGCAACTGTTGATACGTACCCGAGCTATGATACGCACCTCAATTAGAAA
ACCCTGTTGATATATACCCGAGCTATGATACTTCGGCTCTAGGCAGTACGTGGTAACATC
TATTACCTTTAGCTAATGCATCTTATTGTTACATACTTTGTCATCCATACTTAATAATCA
TCCTGACAATTTCAGGCTGTGTTGGCATTCAATCTTCATAGTGACGTGATGAACTATGGA
CGACAATTGTCGTTTGGACTTCTTCTCGTACCTAGGTCTCAACTCCAGTCATGGTTCACG
CGCATTGAGCATAAGATATGAGATGTCTACATAGCTATCACGTGCACCCGCACTTCGGAA
GTTGTTCAGCATCCACCAGCAGCAGCAGCCGCGTCCCTCCATGCACTGCCATCAGCCACG
TCCACGCTTAGAATAGCAGACGACACCCCATCCATCCCCTCCTGACCAGGCTGGCAGTTC
ATCGTGGTAACGCCCACAACATCATGCTCTCTCATCCGGCTTCATGTTTCGGCTTCCACC
ACAACAGCAAAGTCCCACACCGGGTTTCATATTTCAGCCACATCCAGCTGGTATGTCTCT
TCATATTTATTCTTTTGAATATTAATAGAGATTACATATTTATTTAGTATTTATGTTCCT
TCCTGCAGGATCGTACGCATATCAGGAGGCGTCGGCGTCTCGGTCCGGGTGGGGGAGTGA
ACAGGAAGATCCACTATCGCAGCACAACACCCGGATGAACATATTTCGACTCCTCGACCA
GGATCCACACATGATACACAATATGACCAAGACGACTCCGATATTCCTCCTCATAACATT
AGACCACCCCATAGGTGGGGATGGAGTACGCCTAGCACACCGTCTGAGCGTCTAGGCAGA
CGCTGTCAGTGACGCTTATATAATATTAGAGACATGACTATCTAATTATATATGAAACAT
ATGTCTATTCTATGTATGGGACAAATGACTATCTAGTAGCGATAAATTATGGCGGAAAAA
AATTGTTGCTACCTGATCCACTAGCGGGAAATTAGAGGGCTATTTTTTCATTCCGATCAT
CAAAAAATCTTTGTTAGGTAAAAAACATGAATGCATGCACCTATCAGCTTTGCCAACACC
AATTAATACTAGTTGGTCATTATAAATCAATTAGTACTAACGGGTCACGGCTAAGCCGAT
TAGTCTTAATTAGTGATTTTTAAGCCGACTGGAGCCATCTTAGCAGAGCCGATAGGCCTA
TCGGCCTAGCCAAGGCTGACAAGGACTAATCGGCTTCGGCCAAGCCGACTGGATCTAGTA
GACTTTGGCTAGGCCGACGGCGTATTATTTTTAAAAATTATTGAACCTGCACAATATTTT
TCAAATTTAATAAAAATGTATTATTTTAAAAAATAACCGTGCCCAACCGTCATACATATG
GGACATTATATATCAATTTGTGACAAAAGACAACATGATCTTGAACATAAAAATTTGCAA
AATGATGAGTTGTGCAACATAGAATAGTTCAAATTTATGGCATAGTTTCAAATCATCCAC
CACAAGCAAGTTCATAACAAATAAGTTCACACAAATGAATGGAACATCAACAAATATGCT
TATCTTCGTGCTCCTCTTCTTCCTCCTCCTCAAGCACCTCAGTGCCATTGGAACCTCAGA
CGTTGTTCGTATTATCTCCAAAGACGTGTGATGCATCATGTGAAGGCATGTGAGGTATCG
TGCGAGGTGCTCCCATGCCTCCTATGAGAGACCCAAAACTCATGTCTTCCATAGCCATCT
TGATGTCATCATTCCCTCCCTTCTTCTTCTTCTTCTTCTTCTTTTCTTTTGCAACTCCGC
TTGGTTTTTTTTGGCTTGGAGTAGGCAACCGATTTTGGTATAGGGATCATCTTGGCGCTA
TCACTTGATGCCTCATCATCATCATCATCGTCATCNNNATCATCATCATCATCATCATCA
ACCATCGTATCTACATTGCCTTTATTGTTCTCCTCCTCATCATCATACGGACGTTCCTTC
CATTTATCCTCATCCTTCAACACTTTGTAGCAGTGAGGCAACACGAATGCTTGATACGTC
TCCAACGTATCTATATTTTTTGATGGTATCATGCTATTATCTNGTCAAACTTTGGATGTT
ATGCATGTCTTTTATATGTTTTTTGGGACTAACTTACTAACTCA
