Contig Data
morexGenes
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Map Locations of contig_46989 (3455 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012




Predicted Genes from contig_46989

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_62815 4 2102 bp MLOC_62815.3 Available Available LOC_Os02g01510.1, FRAME:-2, EVALUE:0.0, 13102.m00071 protein lactate/malate dehydrogenase, putative, expressed





CDS Structure of MLOC_62815






Contig Sequence (3455 bp)

>contig_46989 3455 assembly3_WGSMorex_rbca.fasta
TAGTAAGGGTATCCCTGACTAAAAGACTTGTTTTAGCCTCTCTTTAGTCAGGGGTNNTTG
GAACTTTAGCCTCTTAAAAAGACTAATTTTAGTCAGACTAGTTTTAGTCCTTTGGATCCA
AGCACCCTCTAAGCTAGGGAGGGGAGGGAATGAGAGAAGAGGAAGGGAAAAGGGAGGGAA
GCAGAGGGGCCAAGACTATTATATAATCTCAGATCAAAAAAATTCAAGATACATAACGTG
TTCAAATATTCTAAAAAGAAGTGTTGACACGCATCAACCTTTCATATACAACCTTAAAAA
ATTTGAGCTCCTAATTCGACCGATAGTAATAGCAACAACAACAAAAGGACAAAATCAGAT
GTTAATAGTGTCAAAATACTATTTACCCAAAGCTGCCACTATTCGTATTCAAATTTTTCT
TTTTCAAATCTCTAAATGTTTTGTAGATATACCCCGCAGGTATGTCAGAAACTTTCAGAA
TGTCTAATATGAAATTTTGTGGTTGATCTCATTGAGCATCTTCATACTTTTTTGGCTAAA
CTACAATGACCCCAATAGATGGTTTATTGGCTTCTGTAGAAGCCCAGATGCTCTACACCA
TCGAAGAACTATCATTTCGCAATGCTGGCACAAATCGCATTTTATTTCATGAAATTAAGA
GGCGTTAGGCGTTACATTACTACATCATCCCTAAGAAAACACTCCCAAATTCGTGTGGGA
GCAGGAACAGAACAACATATAGTACTAGAGTTCTTGCAAATGCTTCATGATTTTACAGCA
AGTAGATCAACTGGCGTTCCTCGCTCAGAGGTCGAGAAGCTGGCAGTTCTCCCAGAGCGT
CTTGGCGGAGCGCCGGAGCTGGGCGGCCTCAGCCTCGGTGAGGTCCATCTCGGCAACACC
GAGGATGCCGCCACGGCCTAGGCGGGCAGGCAGGCTGAGGAACACCTCGTGGCCGTCTGA
GATGCCATGGAAGCCCGAGGCAAGGACAGAGACAGGGTGCACGCGGCGCTGGTCGCGGAG
GAGGGAAGCGGCGAGGCTAGCGACAGAGTAGCCAATGGCCCAAGAGGTGTACCCCTTGAG
GCCGATCACCTCGTAGGCGCCGCCCACCACGGCGCGCCGGATGCCCTCCAGCGCCGCCTC
GTCGAAGCTCCGGTGGCTGTCGCGCAGCGACTTGAACGCCGGCATCCCGCCCACGCTGAT
GCTCGACCAGATCGCCACCGAGCTGTCACCGTGCTCACCCACCATGTATGCCTGCAAAGG
GACCCATTTACTTTGCTTTGTTAGTTAGTGATGGTTCCCAGTTCTTTACCAATGCATGCA
TCTCCATTCTCTAATTAGTGAAAAAATCCAGTCTTCTAAGTACAAGACTACAACCATTCG
ATCTCTTGTTGATTAATGTTCATTAGGTTCAGAATTCTGAGATTACACTGGTCATTCATT
CCCATTACTAGGGAGATGGGTACCATACAAAAAAAAACTCAAATTCTTTGTGTAACGAGA
TGAATTATAGATTGATACTGATGCATTTTAAGATTGTCCCAGTTCGACACCTCGGCTTCT
CCGTGATGAAATTCAGGAAGCAGTAAACAGTTAATGTTACCTGTATACATTCAGCATATA
AGTTTAATCAACATAGCACTAAACTGGGCTACGCGGTGCTTCTTTGTTCACTTGTGTAGA
TGCAACGATTACCAATGCTGAGCAGAAGTTCTATTTAAGTAAATTCGTTATCTACTGTGT
TTTCAAACGTTATTGTAATTTACAGATATTGCATCTCGTATGAAAAGATATGTATCGATC
ACCAAAAGTATGATCTAGGAGTAATTATGCAGCCACCAAACAAATTAAGAAAGTCTAGAT
TTTTGCGGGTAAAAAACAACACTGAAGGTTGCATGTTTGTTCAGTAAATCGAACATGAAC
CGATGATGTTTCTTAGTATCTACTAGTAGTATAAATTTCTTAGTATCTACTCCAAAAATA
ATCAACAAGCTTGGCCGTTCGAAAGAACAAACAATATGCTAGTAGTAATACTGAATGTCG
ACACTGTCGAATGGGGATACCAGTCAACGACAGGCACATGCTTCCACGGCGCCACCGCCG
CGTGGCATCACCCTACTGACTCCACTGCCCACTCCGGCGACGGATTCATGGATGGATTCA
GGAGTGAGTTTTATTTACCTGCACGTCCTGCGCGTTGACGTCGAGGTGCTCGGCGATGAG
GAACCTGAAGCGGGAGGAGTCGAGGTTGGTGCCGGAGCCGATGACGCGGCTGGCCGGGAA
GCCGGAGAGCTTCCAGGCGACGTAGGTGAGGACGTCGACGGGGTTGGAGACGACGAGCAG
CAGCGCGTCCGGGGAGTGCTCGGCGACGGGCGGCACGATCTTGCGGTAGAGGGCGACGTT
CCTCTGCAGCAGGTTGAGCCTGGTCTCGCCCGGGATCTGCCTGGCCCCGGCCGTGACGAT
GACGAGGTCGGAGTTCTTGGTGACGGCGGCGTCGGTGCCGGAGGCGATGCGGACGCGCGG
GAGGAAGGCGGCGGCGTGCTGCAGGTCGAGCGCCTCGCCGCGGAGCTTGTCGGGGAGCGC
ATCGACGAGCGCGATCTCGTCGGCCAGGTTCTGGGTGAGGATGGTCTGCGCGATGGCCAT
GCCCACGTTGCCGGCCCCGACGACGGAGATCTTGGTGAGGCGGCGGTGCGGGACGGCGGA
CGAGGTCGGGGTGGCCGGGCAGCCGTCGGCCACCGGCCGGAAGAAGCCCGACGAGGCGCC
CCCGGCGTCGAAGCCCAGCTCCGACAGCGACGACGCCTTGTGCATCCTCGACGGGGTGGG
GAGGGGACGCTGGTCCGATCAAATGCGGGGCTTGGATTGGGGTTGGGATTGGATGATGAA
CTTGTTCTTCGTGGGGAATGGGAGCCAATGGGTTTATAAACGTATCCTGGGAAAGTGAAA
CCGCTTACCGGTTACCAGTTTTGACTACACATGGTTTGGGAGTTCGCTTTTGAAGGACGA
GAAGAAAGGTTACAACCGGGAGTATTTTACTCGGGCAGTTGTGTCGGACAAAGCCGACCG
AGAAGAAAATCCCCTAAACTAAGAGCATCTCCAGTAGATCCCCTCCCATAAAATAACCGT
TAAAATACGGGTAAATACTGTCCGACCAGACCCCGCAAACGCCTTCGATCCGTAAAAGTT
TTTTACAGGGTGCGATAGAATGTTCACCCTAACCCATGAAAACGCAGGTTCTCCCCTTTA
CCCCGTCGATACCATGTATATATCGAAAACGGTTGATGGATGGGACATCTCAGCCCACGC
TTTTTCCCCACCCACCGTGGGCGGGCTGACCCCTATAATTCCGACCATACCAGCCGTCGG
GATCATGCCGGCAGGCCACCACATGCCCGAGATTGACGTCCATCACTCCCTCGTGCCTCG
GCTGGCCAGAAGCTACAGATCGGCGGTTGTTTGTC