Contig Data
morexGenes
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Map Locations of contig_46961 (5539 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location No map location




Predicted Genes from contig_46961

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_62784 1 1662 bp MLOC_62784.1 Available Available LOC_Os01g58750.1, FRAME:+3, EVALUE:0.0, 13101.m06241 protein expressed protein





CDS Structure of MLOC_62784






Contig Sequence (5539 bp)

>contig_46961 5539 assembly3_WGSMorex_rbca.fasta
CTCCAACCCTCACTTTTACAGGCTGGGAAGACGTTTGAGGGTTGGACCTCTAAATTTTTT
TATGTGTTTAAGAGTTTAAGAGTTCTAGTCTACACCGCTTTTTTGACGAAAACTATAAAA
AAACGGTTATTTTTAAGGGTTTGGGGGCTCTACTAGAGATGCTCTAAGCATGGTTTAGAT
GCATACTCTACTCTTTCGCAAGATAATCGGCGTTTACCACTTCGTTTCGCTAGGGGCAGT
TCTTTTCAGGCTCACAAGTCACAAGTGACTGTCAAACTCAGCTTTATTCTAGAAGCCTAC
TAATTTATGTTCATGGATGGCTGTCAAAATAAGTTGCCTCGTTTTAAGCATGATAGTTTA
TCTAGTACTCTCTCTGATCTAAAAGGTCTTGTATTACTTTACAAAGAAAGTACTAGTTTT
AGAATAAAAGTATTTTTCAGAATAAAATATCAGATTGGGCTGTAAAAATAATCTGCCCGG
AATAAGATGGATATGAGACAACTTATTTGACAGGCATCATAAGCCCCAAAAGAAGTGGCA
ATTAGTCATAGATGACTGCAAACTAAGTTTATTGAATCACATTTGTCGCTATCCTTTCGA
CCTTGGAAATCGAAGCACCAGTGGAAGCAAATGATTGGGCACAACAGGAGATTTGCATTT
GTACAGCAGAAAAGGAAATCATACATCTCCACATCAGAAATAGTCTATTAGGCCTCCAGT
CCAACTAGTAAGAGGAAATTTTATGCCCTGGTAGTACTAGTACTCGTTGCAAGCAAAAAA
AAAAAGAACTAAAGGAGATAATATGAAATGTTAACTACAAAAAGTGTGTTTGCCTGGTAA
TGCCTACCGAGTGACCTGCCCAGAAATGCTGTGGACACTGAGAGACGCCAACGGTTCAAA
GACATATTATTCATCAGCCTGAAGTGGGGAATGGAACTTGTTACAAATGCCAAGAATACA
TTAAGCCACCTCCGCTGCAACAAAACAAGATGAATTCTGGTGGCGCTGCAACAAAACAAG
ATGAATTCTGCTGGCGCTGCAACAAAACACGACCGATGCCTGTGGTTACAACCTCTCACG
CTTCTGCTTCCCTGGAGAACGACAATAGACCATTCGTTCATAGAACGTGCATTATAACGA
GCGAAGGGGCCTTCCTATTACTTGTAAGGAGCAATGATCCTCCTCCGCCGTTTGGGAGTC
TCCCTCTTCACATACATCTTCTCCGTGTCGTTCAGTGGGCGGCTTGATCCATCGGGCAAA
CTGATGAACTTCCAGCCCCCTCCTGAACCACGCCTTCCCTGTGGTCCGAGCTTCTCAACC
ATGTAGGCCCATCCATCGTCTGGTCGTCGTCTGCTGTACTTGTGGCACTTCACCTCCCCT
GCCACCTGCAAACAAATAAAGCATGAGGCAGATGGACAATGAAAAACTAGCTACAGACAG
GTCCAGATATGGAAAGGAGATGACCAATGGAAAACTTGCTACAGAAAGAGTGTTTCCAAT
TCCCCTCTCCATAGAATTTGACATGAACAAGGTTTTCCTATGCACAAATACCACCACCAC
AACAAGCAAACTTAGCAAGCAATTATCATGCGGCCTTAAGTCACTACAACCAGACTGCAG
GAATTTGCACTAGACAACAGAAGTATTAACAGAACAGCACGATCAACTCTTTTTGCCATA
AATAAATCCGCTGCAGGAGTTTCTACTGGATTACAAAAAAAAAAGGGTCATTCTCTTTCA
GCAAATATGATAAAGGGAGCGAAGAAAATGTAATATATTTATTTGAGCCTGCTATAGGTA
AGACTTCTTACCTTGAAATTAGCATTTGAAATTATAGTATTGCTGTATATTGATACTAGT
GGTATTTTAACTGAGGTGCTTAATGCTGCATTATCGTCCTGCTACGTGTCTGTACAGATG
CCCTCTAATCAAGTGTGTCATTTTGCGAACCAGCTGTATGAAAAATCATGCATCACAAAT
TATAATAACTTCCCAAGTTAAATCAAATTTTACAATTTTATTATCCCCTTGAGATGCCTC
AGTTCCATGCTATGCTTACTTTACAGTTAATTGCTTAATAATTCATACCCGAGCTTATGG
AACTTATAGGGTCTTTCTAGTGAAATCTATTTATTAGAGACTGCTGGTCCTGTACATAAG
GCTTCTTACCTTTTTCTTGTTGAACTCCAAGCGTTGAACAAATTCCTCATATAACATCTG
GTCTTCCTTCATCGAAATCTCATACAGGACCTCATCAGGATCTCTTGTTGTACCATCCCA
GCCCTCAGGCATAACTTTGAAGTCAGGTTTATATGGAAGAGATGCCACATGAAACTCCCT
GTCATGGGAATTGAAAAACCTAGAAACACAAAGGAAGAGTCAGTTAGGGAGTAATATGTG
CAATTCCAAGCATAACCTTCCAATCTCATAGTTTTATTCTCACTACTCACGAGAGAAACA
CAGACAATTCGTAAACAGTTGCTTCCGCGTATATGGAGTTACGGAGTAAATGTGCAATTT
AGTACATAACAGCCTTCACCAAGAAGTTAAAAGAAATTCCCACTATTTTGCCAATTCCAC
AATTGCCTTTATGCATATAATGTTGAGATAACTAGTACTCCCTCCGTCCCAAAANNNNTG
ACTCAACTTTGTACTAACTTTAAAATAAGTGACTCAACTTTGTACTAACTTCTAAAGTTA
GTACAAAGTTGAGTCANNNATTTTGGGACGGAGGGAGTAATACACAACTAAATTTTAAGA
AGAACAGGAATGCAGCTGAGCTGAACTTCTCAAGGATTTTATGTTAATGACAGTTTTTGC
TTGCAAAATACTCCCTCGGTCCCAAAATAAGTTTCTCAACTTTGTACTAACTTTGTATTA
AAGTTAGTACGAAGTTGAGAGACTTATTTTGGGATGGAGGGAGCAACACTTAAGCCAACT
TCATCCAGGAATAACTCTATTTGCAACACAAACACGTAGTTTAATGCTTTCCCATCCACT
CAACAAGAATTCTTTGACTCATTTCATTTCAGCAACCATACATCAGTTCAGTCTCAGTTA
CATAGTTCTAACCTAGGATTACCAGAGTGCTACTATCAATTGCCATGATCCAGAGCATTG
GACATTTCTATTCAGGAAGAAACTGCACGAAGCAAAACTCAAGAGACTTGGTGAATTTAC
GAATTAGCTAGACCCCTTACGAATTAGCAGAATCAATTTCTTCTAGTCATTGATTTCCCA
ATAATATTCTCTTAAATAAAACCAGAGGGTTACGAATTAGAACCCTAGATTTTCGACTCG
CAATCTAGTTATTTCAACACAAAACTGAAGGGAGCAAAAAGGATCTCTTCACGTACTCTG
GGCAGCTATCTAGCAGGATCTCGACGGAGTCGTCGAGCGGCTTGCCCTGCTTCCTCTCCT
CCTCCTCCTCCATCTCCTTGAGCCAGAGGATGGCGTGCACGCGCTGCCGCATGACGCGGA
AGTCCTTGGCGAGCCGCTCCACGGTGTACGTGGCGGGGTCCTCCTTGTGCAGCCGGTACA
TCTCCTGCTTCTCCGAGTCCTTGAGGTAGGAGCCCCGGGATCCGGGCTCCCGCACCTGCT
TCAGCAGCTCGCACGTCTCCTGAAACCGCTTGTCCCACGAGTCCACGAACTCCTTCCCTT
CCTTGTTGTCGCGATCCACGGAGCGCAGGATCTCTTCCTCCTCGTCCATGGCGCGTACGG
CCGCCAGCTCCTTGGAGACGGGGGCGGACGGGGAGGGGCGGCCGACGGCGGAGGCGGACC
CGTCGAAGTGGTCCTTGGTGATGCCGGTGGACCAGGAGGAGCCCCATTCGTCCCCGCCCC
CCTCGCCCCCCGGAGATGTGCAGAGGGAGCGGAGGAATGAGGAGATCCTGGAGGCGGCGG
TGGCCGGCGGCGCGGGGAGGCGGCCGTGGAGCAGGGTTTTGCGGAGGGCGAACATTTTTC
GGCTGCGCTCTTGTGATTGGGCTGTCGCACTCACTTACTTGGTTTCAATGGAGGAGATGT
TGTTGGGGTGGGTGCCGCAGGGGCAGGCCTGGGCTAAGTTTCCAGGCCCATCTAAAGTTA
ACTTAACCCAGTGGACTTTTACGCGTTAAGTGGTAACCCTCATGATATGTTTGTTGTAAC
CCCTGTAAATATTTCCATAGATGAATGAAGCCTGCCTTTTTTGCTCAAAAGAAAAACAAA
AACGCCATCACGACGTGTAGCTCGCTGGGTGCACCCTCCGTGTTTTGGGGTTCTTGCACG
TTTTTGCCTTCTTGTTTATTTGTTTATTTCATCTTTTCGGCTATTGCTTGATTTTTCTAG
GTTTAGGTGAAAAGTAAGTTTTTGTGTGTTTTTTGAGAAACAGTGTTTTTTTGCGAGAAG
CACAACTGTGCTTTCTAAAAGTGAAAACATAATTGTGTTTTTGCAAGAAACATAATATGT
GCTAAAGCAAAATTATGTTTTTTGAAAAGGGGAAACCATAGCTTGTACTTCCCGAAAATA
AGAAAAGCCACAACATGTGCTTCCCGAGAAGGGAAAAACATAGTGTCGGTGTAAAAACCG
TCACATCTCGGGTATGGGGTCCCGAACCGTGGACCTTAGATCGATGGGTTGCATGAAAGA
GGGGGGAGAGTGTTTATCCAGGTTCGGGCCCTCTTGAGGAGGTACAACCCTACGTCCCGC
TTGATTATATTGATGTGAATGATGATTACAGAGTCTACCTCAAGATCGTGTATACTAAGC
CGTAGGTGAATCAACCTGTGTACACGAACGAGGACCCCCCGGTTTATATAATCAAAGTGG
GATCTAGGGTTACACACAACTGACCTAGTCTACTTTACTTGGACGTCACGCCGGTCTTCG
ATGCTTTCCTCCTTGAGTACGAGATGAGTGCACATCCCAACCTCCAATAGGTGCGGCCTA
TCAAGCCGACCTCTTCATAGTAAGCCGACTACATGAGGACCCCTTAATCCCGGACTCCCT
CAGTATCCCCCGAACTAGCCTTCAACGGTGATGTGAAGGGTCTTCGGATGAACACGCCCA
AAGTGTTTGGCTTGTAAGGCGAGTTCATTTGCTTCCTCCGAGCAAGAAATGATGATTTCG
TCCTCGGTTGACTCACGATTACCGAAGCATCGCGGGGCCCACAACTTTCAACTCTACACA
AATATTAATAATAATTCTCAATTCTCACATGCCTTCGTAGAGGCAAGCTTATTTCGCAAT
CCCTCATGGAACCGTTCCCTATAACAAGAGGGGGTGACGTCCTTTATAAACAGATCAAAA
TCTGACTTGAGGCTCCATTGCCTCCCAGCCTTGTCAAGAAACCCTATAGCTCTTAACACC
TCCAGAGTGATGGCAGGTTGCTCTTCACGCCCCTCGGCCCCCTTTCGGGAGACTGGGCCA
GTTTCTCTGTTTCTCTCCTCCGCCTGCGTGAGCTTGAAACGTAGGGATATCTTCCCCAAT
CGGATCTCGCACCTACTCGCGGCGGTCTGACCTCCATTGGTGGGAAAGCCTTCGCGGAAA
ACTTCCCTTCCCCACAAAG