Contig Data
morexGenes
Links



Map Locations of contig_46800 (5597 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map locationNo map location




Predicted Genes from contig_46800

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_62640 3 1543 bp MLOC_62640.2 Available Available LOC_Os06g11170.1, FRAME:+1, EVALUE:2e-102, 13106.m01209 protein formin-binding protein-related, putative, expressed





CDS Structure of MLOC_62640






Contig Sequence (5597 bp)

>contig_46800 5597 assembly3_WGSMorex_rbca.fasta
TAAAATCTACAATATAAACTGTCCTGTTTGAAAATACAATAAATTATAAAAACCAGATTA
TATAATCTGGTGGTTCCAAACAGGGCCTAAGCAGTGTTGCCCGTGTCCGCTCCGGTTTCG
TCCCACACAAGCATCACTCTGAACTCCGAACTGAACTCTGAAGTCTAAAGCCGAACCGGC
CCGCAGGAATAACCTCTCGAGCGCCTCCCCCTCCCCGACCGCCCCGCTCCGCCGACCCCA
CGCCGAAATCAAACCCCAACTCGTCCGCTCCGGTGATCCGCCGCCCCAGGAGGCGAAGCC
CCACGACGCATCCGCGCGGAGCCTCCGCCCGCCATGACTGAGGTACTCCCCTTCGAGGCC
GCGCGTTTACCCATCCGCGGCTGCGCGATCGATTCACGCGCACAGATTTGGGGCGTTACC
CGGCGCATCTCGCGATTGTTACCGCGGCCGCCTTCTTGGAATCGATTTTTTTTTTTTTAC
TTTGGCTGGCTAGCGGCTGATGATGACCCGGGGCCTCCCGTGCTCTGGTTCCGGGTTCGT
GGGTCTGGGAAAGTTAGGGTTAGACTCCGAATAAGCGGAATTAGGGTTAGGTTCGCTTGC
TTGTGCATGCCTTGTACGGTCCAATGCGGCGGAGTGGTTGGAAAGTGTAGCTTGGGGATT
CCGAATTACAGATTGTTAGGCCCATGGTGGCACTTAACGCGTCCTAGGTTAAGACTGGGG
AATTTGTAGCAAGTTCAAGTTGAGGTTAGTGGGTCGGGAGTGCCAATGCATCCCGGGGTC
GTGCCGATATCATGTGATGTTCGTCTTTTGGTAGAAAATAGTGAAGAGTTCCTTCTGCCT
TCGAAAAATAATCTGCAATATTCTACAGGCTGTTGTGTAGAAGCTCTGTTATGGTCTTGG
ACGTCCAGTTCTTCATGTTAAGTTTGTGGACTAATAACTTCTCCTCTCTTGTTTTTCAGT
ATTGGGTGAGCCAAGGAAACAAATGGTGCGACTTGTGCAAAATCTTTATATCTAACAATC
CGTTCAGCATCAGGACACATGAACTCGGCAAACGCCACAAGGACAATGTCACCCAAAGAT
TGTCTACGATGCAAAAGGATGGCGCTGCTAAGGAAAAGGAGCAGCAGCAAGCAGCTAAAG
CCCTCCAGCTGATAGAGGCTGTAAGTCCTTAATATGCCGTGTTTTTCTGTGTTTTGCTAT
CCATCAGTCAAAGTCATATCTCACTAAACTAGATTTGTAAATGGAAATGGTGCTACATCC
TTACAACATGCAGGCTTGTCTTTCTAGATCTACATCATCTTTTGTTGCATTTTTTCCTGA
GTTATGGAGGCAGCATTCCTGATTACATATATTTTTTACCTTGCAGAAAGCTAAAAAGAG
TTACCAAAAAGATTTGGAGAATAACCAGAGAAACACCGATGGTGACAGTTCTGCAGCACC
TGGAGAAGGTTTGGTTCTTTAATACCTAAATGCATAATGCACTGCATCCTTTATTTCCCA
ATTGTGTGCATGGCCATTTTTTTGTTTGTATAGCACAAATTAGATCTCGGTCTATTATTA
GGTTCTCCTTTGTTTACCCTTGAACTTCCATTACCTTGCTGACATTTCTCCTCCTGATTC
TAGTTGTTCACTTGCTTAGTTCCGAGCCAGATGGCCACATCACAGCAGGAGAGTGTGATT
GCTGAATCAAGAAATAACCTGTTATGTATCGTCAGTTTTCCAAGCTCCACTTATTTCTTA
TGGTTAAATCACCCATTGAAATATATCTTTTTGTTGGTTCAAAATTATATCCGGCTTGCT
TTTATTCCTGTAAGCCAAATGCTCCTACTCGAGGAAAATACCATGTCAACAAATTCTTAT
ATGATAGGAAAGAAATACGGGCAACAAAATGTCTCAAGACAGACAACACTGAGTTAGCTG
AAAGCTGTTAGGTCTTTCAGGAACTGTACGTCAGTAAATTGCCCTCTTGTCCAACAATTT
AGTGTTCATATTTTTCTGTCCACGGTATCTGGCCTGGCTAATATATGAACTCTAGTTCTA
CCAGGAACCACATATTTTTTCTATTGTACTGGATAGCAAAGACTATATGTTAGTAACATA
TAGTTTTAAAAAGCGCTAGGCGTTAATTGTGCATTTTCCACCGCCTTGCGCTTTCCTGAC
CAGAGCGCACACTTATGCGCAATTATGTGCAGATTAAGTGCTAGGCGTTTTGCTATTGCC
TAGAACCTAGTCGCACGCTTTTTTAGGTATGGACTTATGGTTAGTAATACCATTCCAATA
TGAACCTTGTGTCTGGAATATCCCTAGTATAAATTATGAAGTATACTCTGCATAGACTGA
TGTACCATTTGATAATGCTTGGCACTAAGACAATGTATTGATGTTACTTTGAATGTCTTT
TTTTTACACTGAATGTCTTTTCTGCGTTTAACACGTTTGAAATATGGTCTGTGCAGGATG
GGTATTTGACTCAACTTCAGGATATTATTATGATAAGTCTACTGGACTTTACTACGACTC
GAACTCTGGTTTCTATTATTCCGACGGATTAGGTACTCACATTAACCAGACACACATATC
TGGATTTCGAATTCGTTCCTGCCATACCATATAGAGTGGTTATTCATTATAATTGATATT
GATGTCTTTTTTCTGCTGAGCAGGCAAATGGGTCACCCAGGAAGAGGCATACAAGTGGGC
GGAAACCTCAGAAACTAATGTTGCCCAATCCTCGACCTCACAACCAAAACCGACTGGTGG
AAGCGGGCCTGTCCCTGGTATTAAAGGAGGGCCAGCCCCAGGTGTGGTTGTCACGAAACA
ACTGAACCCGATGAGACCTGTGAAGGGCGCTCCGTCAGCCCTTGCCGCTAACAAGCGAAA
AAGAGAGGACACCAAGAAGCCCAAGGTGGTTTCCAAGGAGGAGGAGGCGGCACTCAGAGC
ACGGGAAGCAGCGAGGAAAAGAGTGGAGGACAGGGAGAAGCCTCTCATGGGATTATACAA
GACTTACTGAGGCGCCAATGCTCCCAAGCTCAATGGGTGGTGCGCCCAGTTGCGCCAAAA
CCGTGGTAATGCCAATGGATGATATTGTTCTGAAAGAAAAACGGGGAAGACTAGCGCCGA
GCCCCGAGCTGCTCTTCAGCGTCAGTGACACATGTATGCATTGTACAATACCTCGTCAAA
AGTTCCTAAATCGGCCTTTGCGCAAAACATGTAAATGGACAGCTCATCCATTATCATCTC
TCTTGTTGTTTCTTCCCAGTGGATTGGATTGCACATGATATAATGCCGAGAACTGTAGCC
AATGCGAGCGCCGCTTGAGATAGATTGTGTGCCATCTAAGTATACATCATCGTTTCATTT
ATGTTGTGATTGTTTTGTGTCATGTCCCGTTATTCTCCCTCTCTTTTGTGATGAGCTCCT
GGCATGCATACGAGGGGCCTGCGGAGAACTCTGCAGCAGACGGTCCCGAGTCAGCTAAGA
AGGAACGTTGTGTGGGAACGGCAAAGCTTGGTCCTTGGGTGCCCTCCCCTCCTCTCGTCC
TTTGCTTTGACGGTCCAAGCTACTTTCGGGGCACCAAGCAGGCAGGTTCACCGGTTTGGC
CTGTGGATCGGGAGAGAGCGAGAGCAACGGCCACCGTACGCGACTGTGCCAACCAGAGTG
AAGGAGTCAACCGGCTGTGCACCGCCGCTGCAACTTTTTTATACTCTTTTTACGAAAGTT
GATCGACATCTGATCCTGGTTTGTAAAAGAAACTTTTTTACATCTTTTTACGAAACTTGA
TCGAGATATGATCCTGATTTGTAAAAGGAAATGTTTACAATAAACACGCCGGCTGAACGT
TTCGTCAGACGCAGCCTATGCGTCAGATTCATATATATCGAACCCATCAGATTAACCTTT
TTTTTTTCTGGGCCCACTCTCCTTTTAAGCCTTATCTTCTCACGAGAACATTCTCCACCA
CTCGTTTTCTTTCCTTTTCTCTTCTTCGTTCTCCTTTAGTCGATCCCCTTTTTCTCTCCC
TCGCCATGAACACCACACCGCCATTAATGTTGCCTTCAAGCACCCCCTCCCTCCCCTCTA
CCCCCTGCTAACACGCGTCCTCACCACATTCCTCACCACCGCCACTTGCAAAGCCCGTTT
TGAGGCGACGGCGGGTTGCTCTACGCCCTCCCTCCCCTCCCCCCTCTACCACCATTTTTT
TGCAAGGCGTCGTGCTTTTCGCTATGATTTTTTTTATCCTTAGTGATTGCAACTTTTTAA
TTTGCCTGTTCCAACATTTATTTTGTCGGTTGTAACAATTCCATCCACGAGCACCAATCT
TTGATTGGTTGGTTTCATCATTTTTTTCACCGGTAGTAGCTTCTCACGTCAGTGGTTCCA
ACTTTTGATTTTGCCGGTTGCAACAATCCCCTTTTTTTGGACAATAGCAACTTTTTGATT
CACTGGTTGTAGCATTTTATTTCGTCGGTAGTAGCTTTTTCTAGAGGAAGAGGATCGATG
CAAATTTTATTTTGATACAACCATGTAGCACAGAAGCTTCGACCATGTGTGCCAGAGCTG
CAAGCAACACAACAACAAGCTTCAAGCCTGGTGGGTGACCATGCCGGCGAGGCGAGCTGC
AACCATGGTGGCGAGTTGCGGGAACTGTCTTTTATTTGTGCTACGAGCGGCCAATTTTTT
TGCTACGTTCCCATGATGGAGTATCCATGGTTTTGCTGGAACCGACTAAATTCTTGCTTC
AACCGGTGTCGATTTTTGTTACAACCGTCTACTAAAAAAGCTGCATCCACGGTTGTCAGA
GTTGCAACCTGGGTTCATCGGAGTTGTAGCCATGGTCATCCAGCGACTTTTTTGCTACAA
CCGGTATCAATTTTTGCTACAACCGGTGTAAATTTTTGCTACATGGGGCGTGTGGTGTGC
GAGGATGCTGAAACCGGTGGAGACGTTTGCTGGAACCTGCCGCTTGAGTGTTTGAAACTT
TTTTCAATGCGGTTGTAATTTTTGTAACTGCTGGTTGCAACTTTTCGTTTATCGTCCATG
GCTTCGCCTTCACGGTTGAAACTTTTTTCATAGTCGGATGAAGCTTTTTTCATCGCTAGA
TGAAACTTTTTTTGTCACCGGTTGTAACTTTTGTTGGTCATCCATAGCTCCCGTCGTATA
CTGGTTGAAGCTTTTTTGTAGCCGGTTGTAGCTTTTTTGTCGTCGGTTGTAGCACTGGGC
ATCTCCCCCGGAGCTTTTTTTTGTTGCAAGCTTGCACATCGAGGATGAGCGACGGGGAGC
ACGCCGGCGAGCTTTAGTCGTCCCAACTGAAGCCACAATGGTCTCAACAAGAGCTTCAAT
CGTAGGGTGCGGCTGTTGCACGAGGCACCAGCAGGGCAACCGCCGAGCCGACGAGCTACT
CCGACGAGCTACTCCGACGAGCGGAGATGAGCTGCTCCAACGAGCTGCTCCGGCAAGCAG
GAGGCTCGGGGAGGAAGGGGCGATCAGATGGGAAGGAGATGCGGGGAGGCGTGACCCGAC
GACGACTGGACGCGGTGCTGCAACGCCCAACGGAGCGAGAACAGCCAGGCAGTCGGTGCT
CCGACCTACCGACGGTG