Contig Data
morexGenes
Links



Map Locations of contig_46767 (5151 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location No map location




Predicted Genes from contig_46767

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_62622 2 1214 bp MLOC_62622.2 Available Available LOC_Os07g48030.1, FRAME:-1, EVALUE:8e-136, 13107.m05131 protein peroxidase precursor, putative, expressed





CDS Structure of MLOC_62622






Contig Sequence (5151 bp)

>contig_46767 5151 assembly3_WGSMorex_rbca.fasta
AGGAGCGCCCGTAGTCATGCCCCGGGGATGTAGCCATATCGGTGAATCTCGTTAACAAAT
CTCGGTGTCGTGCTTGTGTGATTGTTTGGTCCTCGGTAGATCAACGAAGTGCCTCGAATT
AATTCTAACAGGAGGGCCGGTGGCGGCGAGGAGAGGTGCATGGTGAGATGCGGCGGGCGT
GCCTGCTGGGAAGAACAGCACCATGTCGTCCATGAGAAGATTGATGTTGGTGCAAAATTA
AGTGATAGCCATCAAGTGGAAAAACAGGAAGATGGCGATGATCGTGGTTGGGGCAGCGAC
ACTAGCTCTGATCTGTTTGAGTTGGATTTGGACAGTGCGAATAATCACTAGATGGATCGA
AGAACCATAAAATTCGATGAGACTACAGGTATGTATGCGTTTTTCAAGAGACCAAGCGTG
AGTGTGTTGTTCGCGCCTTGAGCTAACAGCTGCCAATATGGCGATTCATTAAGAACTGTT
CTTCACACTGGTAGTTGTGTTGCTGCTTTCTAGTTTAAGTTCTAATCCTCATTAGTACGC
AGGTTGCCCATCTCCCATATGTTAATCGCACGTTGTGACGATCGATGGGTGCCTTGTCTT
TCTTGATGAGAGAGGAGTATGATGGTATTTCAAAGAAGATGCTACGAGCTACCAGTTATG
AAATGAACCTAGGTACTTTAATTTGGATATCCTGCCTTGTTACTAAATATGTCACCAATC
ATAAATCTTGAGTCATTATGTCTAAGCTCGCAAACTGATTCATCGTCAGTGAGGCCTGGA
GAAGGACACCATTGAGAGAGTCCATCATGAAGAAGAGGCTCGAGGACTAGATGATTGAGC
TATGCTACATGTACAGGAAGGTTACGGGATGAGGAAATTATAGGATGTGATGGCGGTTTC
TAATTGATCATTAATAGAGGCATGGGCCCACCCCCCTTGAAATCTGGAGGGGGCATGTTT
AGAAAGTTTGAAAGGAACCTGTAGTTATCCTGTAAAAGTCTGTATGTCTAGCATGTTTCC
TAGATGATTAGGTACGTCCGCGTGTACAAAGACAAGGAGGTGAAGCTCCACTGCTTTCCA
AGCCTCTTATATAATGTGAGGGAAAACATATGATATAACTTAGGCCAACACAGTAGTAAA
GGCACACGCAACGGAGCCGACGGCATGTGTCGGCGTCTGGTTGGTCAGTGTGATGTATTG
TAGCGGTATTAAATCTAGGACTTGAGGAATGTCGTGTCAGCCCGCACCGTACCCATCGTA
TTTTCGACCACCGGAAAGTGGGCCAGCCAAGCCCAATTTACTTGCCATGTTATGCTGCCA
TGCCAAGGGGAGGCCCAACCATGACCCAATGGCCCATCATGCTACCTTCGGGCCAGGCCA
GCCCAAGCACAGCCCACTACAATCAATATAACACTTATCATTTTGAATCAGGGCTTTTAA
CTAGAACATGCATTTTCTATGTTTTAAATCACTAGTTAAGTTACTTTAAGAAAGTATATA
AATACATATTTATCTGACAGCCATAATTTCTATTTATAAGAACATATTTACATCATACAG
GTTCTCCTAATAATCATAACACATGTTTACAGAGATTGAGGTTATTTCAAGCATCATATG
TGATGTGAACTCCGCTTGAGGTTATTTTTACCGCTTGTTCTTTTTTTTCATATTGGACAG
GGCTTATGAAGCAAGAGATGGGCGCTGCTGTCAAGCAAGGCATTCGCGTTGTGATGGATG
AAGCTTCTACGCTTGCTCACGAAATGGCGCCGCTGCGTGCGGAAACTGACAGGTGCCTGG
AAGGGTGACGGGCGGCTTATCGATACCCGAGGACTTCTTTCGGAAGCGATGTCATGTAGA
GACCTGATGCTTTTGGTGGCCGGCTGTACCAAACTTCTGGAGTTGATCTGAAGCCCTTGA
TCTGTAGTTTCATGTCGTTGTGTGGTTGCGGTTATGCTGCGCTTCTTCTGAATTGTAGTA
GTGGTGCCAGCAGGTTTTTTGCCCTCTAATAGGTGACTTCGATTCCGACCACCTGAAGCA
GGATTCCCGGCAACTGCATGCTCCAGCTCGCTCTCACTTAATTTTCCTAGTTTCCTTTGC
TTGTACACTGATAGCGGTTTGCTTCGGTTTATATGGTTATATAGAATTTTGATTAAACTC
TTAATTCCGATCTAATCAAATGAAAGAACGAACCCGTTCCTTCAAAAAATCACAAAGAGT
GTGTACAACTTTGTTGAAACCGATATGAAACATGTGAAAAATGTGAAACTGAAGCGAACC
TTTAGTGATTGTAGAACAGACGAGAAACAAATTAATAGAAGAATGTTGAGATCCCCAAAA
GGTGAAAATGGATACAGAGAAGGCAACAAATAATGGAGTACGTGGCAGTACAAGGCGCTG
AAGACACATATTAGATGGCTCATTTTGTGGAGAAAAAATGTGGTTAATTCAAATCTCAAA
GCTGCAGGTTGATGCATGGCGTGGAGGCTATATGTTCTTAGGTCGTCTTGGAGCAGGTGC
GCCTGATGAGACCCTGTGGGAAAATCAAGGGGCTGATGTTCCCCATCTTCACCATGGCCG
CGGCGAAGGCATTGCTGAACGCGTCCGGGTTAGATGCGAAGCCGTCGATGATTTCTTCGG
TGGCACCGCCGGCAACGGCGTACAACACCTGGTCGGAGTGCAGGAGCCCCTTATTGAGCT
TGAGGTTGACGAAGTAATCGTTGTTGAAGGTGTCCGGGGTGGTGGCGTCCAGCGGGGCCA
GGTTGCCGTCGCCGGAGCCGAGGGGCTGAGGGCAGGTGGCCATGCGCGCCGTCGCGAAGT
CCGGGTCGATGTTGGCCTCGTTGTAGAGCCTGCTCCTGAAGTTCCGGCACTGCGCCCGGC
CGATGGTGTGCGCGCCGGAGAGGGCGACCATGTCGGTGAGGTTGAGCCCCTTGGCGGCGA
AGCGGGTGTTGAGGTCGGCGACGCCGAGCGATGGCGGAGGCAGGTCGCGGTTGGCCAGTG
TCTCGCTAGCCGTGTCAGAGTCCCTCCTCCCCAGCGACACCGTCCACGACGGCCCTCCCA
CCTGCATAGTGCATGCACACCGGCGGGAATGTAAAACCAAATAATGGATTGAGGTGATGC
ATGCATGCGAGCAAATCAATAAGCTGAGGTGATGGAATCGAAGATGATCGTCTAAACTCT
TACCGCGACGACGGAATCGCGGGCGGCGACGGCGAGGATGTCGGCGCAGGAGACGACGCG
CTTGCACGCGCGCTCCACATCCGACTTGATTTTTTCGATGACGTCGAAGCCCCGCAGCGA
TCCCACGTTCCCGAATGCGTTCCGCTCGTTGCCAGCCAGCAGAACGGACGCGTCACAGCC
CTGCACGTTTACATATGTAGCCAAGCAACATGCACGCACGCACGCACGGTTAACCAATGG
TGTTGAGCAAATGAAACGGATCTAAACAATGGCAAGTGTGAAGAACTTGCTTGGACGAAG
CAGTCGTGGAAGTGCAGCCGGAGCAGCGACGCGGCCATGCGGGGGTCACTGCTCACGGCG
GCCGCCACGCCGCTCTTGATGGTGGCCAGCGCCACCGGGCACGACGCGTCGTAGAACGTC
GGGGATATCTGCGCCGACGCCGCCGCGGCCAGGCACAGGAGCAGCACCACTGATAGAGAT
GAAGATGCCATGACAACTACCTCTACCTGCCTGCTGGTCGCTATAGGAGAGCTAGCTAGC
TTTTGTGGTGGATGCTGATGTAATGGCCTGCATTCCATGCAGATATATATATATAGCCAT
TTCTAGGATTTTTGTGGTCGTCCATCTACTGCTAGCTGTTTGATCTACATCGTGCACGGA
TGTACTATTATGCATAGAGTCGAATTAATTAGAGTAGTTAACCAGCAGCTGTTGAAGAAT
GATTTTGCAGGGAGTTAACGTCGGTATTATATCACTAGCAAGTAGACATGTTTTGCTAAG
TCGTACACTTACGTGCGTGGATCGATGTATCATGCATAGACTTCATTCAAGTCAATGAAA
TTCAAAAACTACATATTCGTTTTTTTTTCAAGGGAAAAAATATTCCATATTATTTTAAGA
AATAGCTTTCTTCCAAGTCAACTTCTTTATATGCCAACCAAACTCTAGTTGCATAGTTAG
AAGGACAATGATATCCTCAGTCATTATGATTTAAGTCTCAGACTTGACAATGGTGCTCGC
ATTTTTCTAAATTTATTTCAAGACTTTCAGCAACATTCAGTGGGAGGAGAGTCGTTTCCA
TCGATTACAAAGACGTTTATGGCGACTTCATCAATCTCAATATAATGTGTGGGTTCAGTC
TTTCAAAGGTGCTCGTAGAAGTAAGATGGGTGTGCGTATATTCCTAGGGGTTAGTGTTTA
TACATATATATGAACATCAATGTTTGTACTGTGTTTAAAGAAATAGTCAATTTCTCTATA
TTATTTTTTCAGAAGAAAAGAACTTGTCTATATTATTTGACCAAGTGCTGCATAATGTAC
AATGGGTCGTGCGTGCACGGGTGCATATACCACACATATAGCGTACGGGCACATCAGACC
TGTAATCGAATATCCACGATCGTTTCAACGTCTTAGACCCCGATTACATAAGTGTCATTC
TGCATTAGATGTATCCTATGATCTCTACGATATGACATGGTTACCCGACGTCCGAATGAA
ATAGCTAATTAGCTACAAGAGATGATTCTACAAGTAACTGTGGATGGAAATATATTTAGG
ACGTGTTTGGTTGTCTTTCCGCGCGAGTCTGGTTCGTGGAGTCTCGCTCAACAAGGCCTA
GATGAGAAAAAAGAACTTCTTCACCGCAAGGCGTGGCGACCAACTTCAACGATACCAACA
ATGTGCTTTCACATATGGTTGGCGTAAACTTCTTCCGACGTCCGACTAGTCTTAAACCCT
CTATGGCCGTCGTTGCTGACAAAAGCAACTTGCACACTGCAATCTTCCCGTAAACTGCAA
ATTAAACCCCAGATACCTTTTGACGAATACCACATACCATTTGTCCTAGCGGTGCACAAG
AGCAGCAGCTGAAGCAACAAGCAAACGAACAATCAAGGAGCAAGCAATGTAGCAGAAGTA
GTAAGCATGCATGATCAAATGGCATATAGCAAGTTCAAACCTAGCACTACT